Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq580 118 9e-22
seq54 118 9e-22
seq15 118 9e-22
seq687 95.1 1e-14
seq59 95.1 1e-14
seq819 86.0 5e-12
>seq580
Length=281551
Score = 118 bits (130), Expect = 9e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| ||||| | ||||| || ||||||| |||| |||||||| ||
Sbjct 199622 AATGCAGATCTTTGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCATC 199681
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||| ||||| | ||| || ||| ||||| ||||||||||| || |||||
Sbjct 199682 TGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCCCCAGACCA 199741
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || || || || || || | ||||||| || || | | ||||||||
Sbjct 199742 GCAGCGTCTGATCTTCGCTGGAAAGCAGCTCGAAGATGGCCGTACCCTTGCGGATTACAA 199801
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || ||||| || || || || || |||||
Sbjct 199802 CATCCAGAAAGAGTCAACCCTCCACTTGGTGCT 199834
>seq54
Length=1192742
Score = 118 bits (130), Expect = 9e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| ||||| | ||||| || ||||||| |||| |||||||| ||
Sbjct 263273 AATGCAGATCTTTGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCATC 263332
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||| ||||| | ||| || ||| ||||| ||||||||||| || |||||
Sbjct 263333 TGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCCCCAGACCA 263392
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || || || || || || | ||||||| || || | | ||||||||
Sbjct 263393 GCAGCGTCTGATCTTCGCTGGAAAGCAGCTCGAAGATGGCCGTACCCTTGCGGATTACAA 263452
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || ||||| || || || || || |||||
Sbjct 263453 CATCCAGAAAGAGTCAACCCTCCACTTGGTGCT 263485
>seq15
Length=1624393
Score = 118 bits (130), Expect = 9e-22
Identities = 157/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| |||||||| ||||| |||| || || | ||||| |||| || ||| |||
Sbjct 1057383 ATGCAGATATTTGTGAAGACACTGACAGGGAAGACGATCACTCTCGAGGTTGAGAGCTCT 1057324
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || || || |||| || | ||| ||||| || ||||| |||||||||
Sbjct 1057323 GACACTATTGA--CAATGTCAAAGCTAAGATTCAG-GACAAGGAGGGGATCCCACCTGAC 1057267
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||| || | || || || || ||||| |||| |||| ||| || | | ||||||
Sbjct 1057266 CAGCAGAGGTTGATCTTCGCTGGGAAACAGCTAGAGGATGGTCGTACCCTTGCGGATTAC 1057207
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| ||||| || || || ||| | || ||
Sbjct 1057206 AACATTCAGAAAGAGTCTACCCTCCATCTCGTTCT 1057172
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054
||| ||||| || || || || || ||||||| || ||||||| |||| || |||
Sbjct 1075975 AACCATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACTCTCGAGGTCGAGAG 1075916
Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || || ||||| | ||| || ||| ||||| || || ||||| || ||
Sbjct 1075915 TTCGGATACGATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCCGA 1075856
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| |||||| | ||||| ||||| || || | || || | || || | | |||||
Sbjct 1075855 CCAGCAGCGGTTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACCCTCGCGGATTA 1075796
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||| || || ||||| ||||| ||| | ||||| || | || |||||
Sbjct 1075795 CAATATCCAGAAGGAATCGACGCTCCATCTGGTGCTTCGGTTGAGGGGAGG 1075745
Score = 95.1 bits (104), Expect = 1e-14
Identities = 156/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| |||| || || | ||||| | || |||||| ||
Sbjct 1057611 ATGCAGATTTTTGTGAAGACCCTGACTGGAAAGACTATCACTCTGGAGGTGGAGAGTTCA 1057552
Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| || || || | || ||||| | || | ||| ||||| || || ||||| || || |
Sbjct 1057551 GATACCATAGA-TAACGTGAAGGCGAAGATTCAA-GACAAGGAGGGCATTCCTCCAGATC 1057494
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || ||||||||||||| || || || || |||| | || ||| |||||||
Sbjct 1057493 AGCAGAGGCTTATTTTTGCCGGGAAGCAGTTGGAGGATGGCAGGACCCTGGCGGATTACA 1057434
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
| || || || || || || || || | ||||| |||||
Sbjct 1057433 ACATCCAGAAGGAGTCGACCCTTCACCTTGTGCTCAGGCT 1057394
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || | ||||| || ||||||| |||| || ||| ||
Sbjct 1058296 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCC 1058237
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| | || ||||| || ||| ||||| || || || || || || ||
Sbjct 1058236 GACACGATCGA-TAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCA 1058178
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||||| |||| || ||||| || || | || |||| || || | | |||||||||
Sbjct 1058177 GCAGCGGCTTATCTTCGCCGGGAAGCAGCTCGAGGATGGCCGGACCCTTGCCGATTACAA 1058118
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| || || ||||| || || ||| | || ||
Sbjct 1058117 TATCCAGAAGGAATCGACTCTTCATCTGGTCCT 1058085
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/216 (70%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| ||||| || ||||| | || || ||| | || || | || || ||| ||
Sbjct 1074832 AATGCAGATATTCGTGAAGACCCTAACTGGGAAAACAATTACCCTGGAGGTTGAGAGCTC 1074773
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||||||| || || || |||| || ||| || || |||||||| ||||| ||
Sbjct 1074772 TGACACTATTGA--CAATGTCAAAGC-TAAGATCCAGGATAAGGAAGGGATCCCACCGGA 1074716
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| ||| || | || ||||| || ||||| | || |||| |||||| | | |||||
Sbjct 1074715 CCAGCAGAGGCTGATCTTTGCTGGGAAACAGCTTGAGGATGGTCGCACACTTGCAGATTA 1074656
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || || || || ||| | || ||
Sbjct 1074655 TAACATCCAGAAGGAGTCTACCCTCCATCTCGTCCT 1074620
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || | ||||| || | || || | || || ||| ||
Sbjct 1075743 ATGCAGATTTTCGTTAAAACCCTAACCGGGAAGACGATAACCTTGGAGGTCGAGAGTTCA 1075684
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| || ||||| | ||| || ||| || || || || ||||| || || ||
Sbjct 1075683 GATACGATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGTATTCCTCCGGATCAG 1075624
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || |||| || |||||||| ||||| ||||||| || || ||| |||||||||
Sbjct 1075623 CAGAGGCTTATCTTCGCCGGCAAGCAATTGGAAGATGGCCGAACCTTGGCGGATTACAAT 1075564
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| || || ||||| || || ||| | || || | || |||||||
Sbjct 1075563 ATCCAGAAGGAATCGACTCTTCATCTTGTCCTCCGTCTCCGAGGAGG 1075517
>seq687
Length=229775
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| | ||||| ||| ||||||| | || || ||| |||
Sbjct 53116 ATGCAAATATTTGTTAAGACCCTCACCGGAAAAACCATCACTTTGGAGGTTGAGAGCTCT 53175
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || | ||| || ||| |||||||| || || ||||| |||||
Sbjct 53176 GACACGATTGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 53235
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || ||||| ||||| || | || || | ||||| | | || |||||
Sbjct 53236 CAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCGCTGACTACAAC 53295
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || || || || || || ||
Sbjct 53296 ATCCAGAAGGAGTCTACCCTTCACTTGGTTCT 53327
Score = 84.2 bits (92), Expect = 2e-11
Identities = 154/222 (69%), Gaps = 9/222 (4%)
Strand=Plus/Plus
Query 24994 GAACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052
||||| ||||| || ||||| || || | || || || ||||||| |||| || ||
Sbjct 52882 GAACAGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTCGAGGTTGAA 52941
Query 25053 TCGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCC 25108
||||||||||| || |||| |||| || ||| ||||| || || |||||
Sbjct 52942 AGCTCTGACACTATTGATAATGTCA---AAGC-CAAGATCCAAGACAAGGAGGGCATTCC 52997
Query 25109 ACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGG 25168
|| ||||| || || | || ||||| ||||| || | || |||| ||||| | |
Sbjct 52998 CCCAGACCAGCAAAGGCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTGC 53057
Query 25169 CGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| ||||| || || || || ||||| || || | |||||
Sbjct 53058 CGACTACAACATACAGAAGGAGTCCACCCTCCACCTGGTGCT 53099
>seq59
Length=1152742
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| | ||||| ||| ||||||| | || || ||| |||
Sbjct 730597 ATGCAAATATTTGTTAAGACCCTCACCGGAAAAACCATCACTTTGGAGGTTGAGAGCTCT 730656
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || | ||| || ||| |||||||| || || ||||| |||||
Sbjct 730657 GACACGATTGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 730716
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || ||||| ||||| || | || || | ||||| | | || |||||
Sbjct 730717 CAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCGCTGACTACAAC 730776
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || || || || || || ||
Sbjct 730777 ATCCAGAAGGAGTCTACCCTTCACTTGGTTCT 730808
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/211 (70%), Gaps = 7/211 (3%)
Strand=Plus/Minus
Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053
|||| ||||| || ||||| || || ||||||| || ||||||| |||| || ||
Sbjct 893370 AACAGATGCAGATCTTTGTGAAAACCCTGACCGGAAAGACCATCACCCTCGAGGTTGAAA 893311
Query 25054 CGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110
|| ||||| || || || || |||| || | || ||||| ||||| ||||| |
Sbjct 893310 GCTCCGACACCATTGA--CAATGTCAAAGCCAAGATCCAA-GACAAGGAAGGTATTCCCC 893254
Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170
| ||||| || || | || ||||||||||| || | || || | ||||| | | ||
Sbjct 893253 CAGACCAGCAAAGGCTGATATTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCG 893194
Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACA 25201
| ||||| || || || || ||||| || ||
Sbjct 893193 ACTACAACATCCAGAAGGAGTCCACCCTCCA 893163
Score = 84.2 bits (92), Expect = 2e-11
Identities = 154/222 (69%), Gaps = 9/222 (4%)
Strand=Plus/Plus
Query 24994 GAACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052
||||| ||||| || ||||| || || | || || || ||||||| |||| || ||
Sbjct 730363 GAACAGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTCGAGGTTGAA 730422
Query 25053 TCGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCC 25108
||||||||||| || |||| |||| || ||| ||||| || || |||||
Sbjct 730423 AGCTCTGACACTATTGATAATGTCA---AAGC-CAAGATCCAAGACAAGGAGGGCATTCC 730478
Query 25109 ACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGG 25168
|| ||||| || || | || ||||| ||||| || | || |||| ||||| | |
Sbjct 730479 CCCAGACCAGCAAAGGCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTGC 730538
Query 25169 CGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| ||||| || || || || ||||| || || | |||||
Sbjct 730539 CGACTACAACATACAGAAGGAGTCCACCCTCCACCTGGTGCT 730580
>seq819
Length=180711
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/211 (70%), Gaps = 7/211 (3%)
Strand=Plus/Plus
Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053
|||| ||||| || ||||| || || ||||||| || ||||||| |||| || ||
Sbjct 9955 AACAGATGCAGATCTTTGTGAAAACCCTGACCGGAAAGACCATCACCCTCGAGGTTGAAA 10014
Query 25054 CGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110
|| ||||| || || || || |||| || | || ||||| ||||| ||||| |
Sbjct 10015 GCTCCGACACCATTGA--CAATGTCAAAGCCAAGATCCAA-GACAAGGAAGGTATTCCCC 10071
Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170
| ||||| || || | || ||||||||||| || | || || | ||||| | | ||
Sbjct 10072 CAGACCAGCAAAGGCTGATATTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCG 10131
Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACA 25201
| ||||| || || || || ||||| || ||
Sbjct 10132 ACTACAACATCCAGAAGGAGTCCACCCTCCA 10162
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/211 (70%), Gaps = 7/211 (3%)
Strand=Plus/Minus
Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053
|||| ||||| || ||||| || || ||||||| || ||||||| |||| || ||
Sbjct 178299 AACAGATGCAGATCTTTGTGAAAACCCTGACCGGAAAGACCATCACCCTCGAGGTTGAAA 178240
Query 25054 CGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110
|| ||||| || || || || |||| || | || ||||| ||||| ||||| |
Sbjct 178239 GCTCCGACACCATTGA--CAATGTCAAAGCCAAGATCCAA-GACAAGGAAGGTATTCCCC 178183
Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170
| ||||| || || | || ||||||||||| || | || || | ||||| | | ||
Sbjct 178182 CAGACCAGCAAAGGCTGATATTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCG 178123
Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACA 25201
| ||||| || || || || ||||| || ||
Sbjct 178122 ACTACAACATCCAGAAGGAGTCCACCCTCCA 178092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433316476454330
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