Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_008296.2
Length=177300
Score E
Sequences producing significant alignments: (Bits) Value
seq222 107 2e-18
seq157 105 8e-18
>seq222
Length=596275
Score = 107 bits (118), Expect = 2e-18
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 166681 GAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACC 166740
|| ||||| |||| ||| ||| || | |||||||| ||||| ||||| ||| | |||
Sbjct 106769 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 106828
Query 166741 TACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 166800
||||| ||||| |||| ||||||||| || || | ||||||| ||||| ||| |||
Sbjct 106829 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 106888
Query 166801 AACAACTCTCGCTCGCTGCACTTCTTCCTCGC 166832
|| || | ||| || | ||||||||||| ||
Sbjct 106889 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 106920
Score = 107 bits (118), Expect = 2e-18
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 166681 GAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACC 166740
|| ||||| |||| ||| ||| || | |||||||| ||||| ||||| ||| | |||
Sbjct 179842 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 179783
Query 166741 TACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 166800
||||| ||||| |||| ||||||||| || || | ||||||| ||||| ||| |||
Sbjct 179782 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 179723
Query 166801 AACAACTCTCGCTCGCTGCACTTCTTCCTCGC 166832
|| || | ||| || | ||||||||||| ||
Sbjct 179722 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 179691
>seq157
Length=750868
Score = 105 bits (116), Expect = 8e-18
Identities = 155/217 (71%), Gaps = 3/217 (1%)
Strand=Plus/Plus
Query 167747 CAGTCCAGTTGGTTCTTTGCACCGTCGTTTGGTGTTGCAGCGATATTTAGATTCCTACTA 167806
||||| ||||||||||||| || |||||||| ||||| |||||| ||||| | |
Sbjct 399153 CAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTTT 399212
Query 167807 TTCCTAC--AGGGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTTGCTG 167864
|| | | |||||||| |||| || || | ||| | || |||||||||||||||| ||
Sbjct 399213 TTTTTTCCAAGGGTTTC-ATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTTG 399271
Query 167865 GTATCCTAGGCGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTCTGT 167924
| |||| ||| || | | || || ||||||| ||| ||||| ||||| | |
Sbjct 399272 AAGTGTAGGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACTTTAT 399331
Query 167925 ATGAAGATGGTGAGCAAGCAAACACTTTCAAAGCATT 167961
||||||| |||| ||||| || ||| | || ||
Sbjct 399332 TTGAAGATAGTGATGGTGCAAATACATTCCATGCTTT 399368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567216528747200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |