Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq222 107 2e-18 seq157 105 8e-18 >seq222 Length=596275 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 166681 GAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACC 166740 || ||||| |||| ||| ||| || | |||||||| ||||| ||||| ||| | ||| Sbjct 106769 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 106828 Query 166741 TACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 166800 ||||| ||||| |||| ||||||||| || || | ||||||| ||||| ||| ||| Sbjct 106829 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 106888 Query 166801 AACAACTCTCGCTCGCTGCACTTCTTCCTCGC 166832 || || | ||| || | ||||||||||| || Sbjct 106889 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 106920 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 166681 GAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACC 166740 || ||||| |||| ||| ||| || | |||||||| ||||| ||||| ||| | ||| Sbjct 179842 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 179783 Query 166741 TACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 166800 ||||| ||||| |||| ||||||||| || || | ||||||| ||||| ||| ||| Sbjct 179782 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 179723 Query 166801 AACAACTCTCGCTCGCTGCACTTCTTCCTCGC 166832 || || | ||| || | ||||||||||| || Sbjct 179722 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 179691 >seq157 Length=750868 Score = 105 bits (116), Expect = 8e-18 Identities = 155/217 (71%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 167747 CAGTCCAGTTGGTTCTTTGCACCGTCGTTTGGTGTTGCAGCGATATTTAGATTCCTACTA 167806 ||||| ||||||||||||| || |||||||| ||||| |||||| ||||| | | Sbjct 399153 CAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTTT 399212 Query 167807 TTCCTAC--AGGGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTTGCTG 167864 || | | |||||||| |||| || || | ||| | || |||||||||||||||| || Sbjct 399213 TTTTTTCCAAGGGTTTC-ATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTTG 399271 Query 167865 GTATCCTAGGCGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTCTGT 167924 | |||| ||| || | | || || ||||||| ||| ||||| ||||| | | Sbjct 399272 AAGTGTAGGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACTTTAT 399331 Query 167925 ATGAAGATGGTGAGCAAGCAAACACTTTCAAAGCATT 167961 ||||||| |||| ||||| || ||| | || || Sbjct 399332 TTGAAGATAGTGATGGTGCAAATACATTCCATGCTTT 399368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567216528747200