Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq202 152 6e-32
seq1330 150 2e-31
seq801 150 2e-31
seq162 91.5 2e-13
seq52 91.5 2e-13
seq408 89.7 6e-13
seq3 87.8 2e-12
seq308 86.0 7e-12
seq139 86.0 7e-12
seq83 84.2 2e-11
seq12 84.2 2e-11
>seq202
Length=624202
Score = 152 bits (168), Expect = 6e-32
Identities = 404/609 (66%), Gaps = 11/609 (2%)
Strand=Plus/Plus
Query 93083 TACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTG 93142
|||| || ||||| |||||| || || || |||||||| || |||| ||| ||| |
Sbjct 31366 TACAGCAAACACGCGAAGTCGCAGTGCAAGCCCTCGTCTCGCGAGATCAGCTCGTTGGAG 31425
Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTACC 93201
|| || | || || | | || || || || ||||||||||| | ||| ||||| ||
Sbjct 31426 AAAGTCAGTCCCGGCATTAAACCGCGCTTTTTAAGCCAAAATATCG-CGCAGAAACTCCC 31484
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
|| || || || || |||||| ||||| || || || || || || ||| ||||
Sbjct 31485 CGAGAAGAAAATCCCCTCCACGCAGGCAAAGGCTACGATTCGCTCCGCGAAAGACTCGGA 31544
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
| | ||||||| | | ||||| | ||| || ||| | ||||| | || ||
Sbjct 31545 ---GCCGTCGATCCATCTCAGGGCCCACTGGGCCTTCTTCGCGACGCAAGGGATGGTGTC 31601
Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381
||| |||| || ||| | |||||| || || ||||| || |||| | ||
Sbjct 31602 GATCGCGTGGAAGAGGCGGTGCTTCTCGTCGGAGTCCTTGATGTACGTCTCGAGAAGGAG 31661
Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441
||||| || || |||| ||||| || || || ||||| |||||||| | ||
Sbjct 31662 GCTGTACATCTCGGAGTGGATGTTCTCAATGGCGATCTGGAACCCGTAGAAGGCGCGGGC 31721
Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501
|| | || ||| || || | ||| ||| | ||||||||||| ||| || || ||
Sbjct 31722 CTCGGCGACCTGGACCTCCTTCATAAACCTCCCAGCGAGATTTTCAAGGACAATGCCGTC 31781
Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTT 93561
||| || || || || || | || ||| | || || |||| | || ||
Sbjct 31782 GGAGGCAGCGAAGAAGGCGAGAATGTGCGAGACGAAGTGCCTCTCGCCGTCGGATAGGGC 31841
Query 93562 ATCCCAAT--CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619
||||| | ||||| || | | || ||||| || ||| | ||||| || || ||
Sbjct 31842 TTCCCACTGGCGGAT--GTCCTGGCATAGGTCGACCTCCTCGGCGGTCCAGAAGGAGGCC 31899
Query 93620 TCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACA-AAACG 93678
|| || || |||||||| |||||||| ||| | || || || ||||| || ||| || ||
Sbjct 31900 TCGGCCTTCTTGTACATTTCCCATATTTCTGGGTACTGGATCGGAAACAT-ACAGAAGCG 31958
Query 93679 ATTAGGGTT 93687
|| ||||||
Sbjct 31959 ATCAGGGTT 31967
>seq1330
Length=73179
Score = 150 bits (166), Expect = 2e-31
Identities = 415/628 (66%), Gaps = 11/628 (2%)
Strand=Plus/Minus
Query 93083 TACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTG 93142
|||| || ||||| |||||| || || || |||||||| || |||| ||| ||| |
Sbjct 26771 TACAGCAAACACGCGAAGTCGCAGTGCAAGCCCTCGTCTCGCGAGATCAGCTCGTTGGAG 26712
Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTACC 93201
|| || | || || | | || || || || ||||||||||| | ||| ||||| ||
Sbjct 26711 AAAGTCAGTCCCGGCATTAAACCGCGCTTTTTAAGCCAAAATATCG-CGCAGAAACTCCC 26653
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
|| || || || || |||||| ||||| ||||| || || || || ||| ||||
Sbjct 26652 CGAGAAGAAAATCCCCTCCACGCAGGCAAAGGCCACGATTCGCTCCGCGAAAGACTCGGA 26593
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
| | ||||||| | | ||||| | ||| || ||| | || || | || ||
Sbjct 26592 ---GCCGTCGATCCATCTCAGGGCCCACTGGGCCTTCTTCGCGACGCAGGGGATGGTGTC 26536
Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381
||| |||| || ||| | |||||| || || ||||| || |||| | ||
Sbjct 26535 GATCGCGTGGAAGAGGCGGTGCTTCTCGTCGGAGTCCTTGATGTACGTCTCGAGAAGGAG 26476
Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441
||||| || || |||| ||||| || || || ||||| |||||||| | ||
Sbjct 26475 GCTGTACATCTCGGAGTGGATGTTCTCAATGGCGATCTGGAACCCGTAGAAGGCGCGGGC 26416
Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501
|| | || ||| || || | ||| ||| | ||||||||||| ||| || |||||
Sbjct 26415 CTCGGCGACCTGGACCTCCTTCATAAACCTCCCAGCGAGATTTTCAAGGACGATGCCATC 26356
Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTT 93561
||| || || || || || | || ||| | || || |||| | || ||
Sbjct 26355 GGAGGCAGCGAAGAAGGCGAGAATGTGCGAGACGAAGTGCCTCTCGCCGTCGGATAGGGC 26296
Query 93562 ATCCCAAT--CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619
||||| | ||||| || | | || ||||| || ||| | ||||| || |||||
Sbjct 26295 TTCCCAGTGGCGGAT--GTCCTGGCATAGGTCGACCTCCTCGGCGGTCCAGAAGGATGCC 26238
Query 93620 TCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACA-AAACG 93678
|| || || |||||||| |||||||| || | || || || ||||| || ||| || ||
Sbjct 26237 TCGGCCTTCTTGTACATTTCCCATATTTCCGGGTACTGGATCGGAAACAT-ACAGAAGCG 26179
Query 93679 ATTAGGGTTATCTTTTAGTAACGGCTCT 93706
| |||||| ||| | |||||||
Sbjct 26178 GTCCGGGTTAGGAGCTAGCAGCGGCTCT 26151
Score = 150 bits (166), Expect = 2e-31
Identities = 415/628 (66%), Gaps = 11/628 (2%)
Strand=Plus/Plus
Query 93083 TACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTG 93142
|||| || ||||| |||||| || || || |||||||| || |||| ||| ||| |
Sbjct 46409 TACAGCAAACACGCGAAGTCGCAGTGCAAGCCCTCGTCTCGCGAGATCAGCTCGTTGGAG 46468
Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTACC 93201
|| || | || || | | || || || || ||||||||||| | ||| ||||| ||
Sbjct 46469 AAAGTCAGTCCCGGCATTAAACCGCGCTTTTTAAGCCAAAATATCG-CGCAGAAACTCCC 46527
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
|| || || || || |||||| ||||| ||||| || || || || ||| ||||
Sbjct 46528 CGAGAAGAAAATCCCCTCCACGCAGGCAAAGGCCACGATTCGCTCCGCGAAAGACTCGGA 46587
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
| | ||||||| | | ||||| | ||| || ||| | || || | || ||
Sbjct 46588 ---GCCGTCGATCCATCTCAGGGCCCACTGGGCCTTCTTCGCGACGCAGGGGATGGTGTC 46644
Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381
||| |||| || ||| | |||||| || || ||||| || |||| | ||
Sbjct 46645 GATCGCGTGGAAGAGGCGGTGCTTCTCGTCGGAGTCCTTGATGTACGTCTCGAGAAGGAG 46704
Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441
||||| || || |||| ||||| || || || ||||| |||||||| | ||
Sbjct 46705 GCTGTACATCTCGGAGTGGATGTTCTCAATGGCGATCTGGAACCCGTAGAAGGCGCGGGC 46764
Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501
|| | || ||| || || | ||| ||| | ||||||||||| ||| || |||||
Sbjct 46765 CTCGGCGACCTGGACCTCCTTCATAAACCTCCCAGCGAGATTTTCAAGGACGATGCCATC 46824
Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTT 93561
||| || || || || || | || ||| | || || |||| | || ||
Sbjct 46825 GGAGGCAGCGAAGAAGGCGAGAATGTGCGAGACGAAGTGCCTCTCGCCGTCGGATAGGGC 46884
Query 93562 ATCCCAAT--CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619
||||| | ||||| || | | || ||||| || ||| | ||||| || |||||
Sbjct 46885 TTCCCAGTGGCGGAT--GTCCTGGCATAGGTCGACCTCCTCGGCGGTCCAGAAGGATGCC 46942
Query 93620 TCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACA-AAACG 93678
|| || || |||||||| |||||||| || | || || || ||||| || ||| || ||
Sbjct 46943 TCGGCCTTCTTGTACATTTCCCATATTTCCGGGTACTGGATCGGAAACAT-ACAGAAGCG 47001
Query 93679 ATTAGGGTTATCTTTTAGTAACGGCTCT 93706
| |||||| ||| | |||||||
Sbjct 47002 GTCCGGGTTAGGAGCTAGCAGCGGCTCT 47029
>seq801
Length=188201
Score = 150 bits (166), Expect = 2e-31
Identities = 415/628 (66%), Gaps = 11/628 (2%)
Strand=Plus/Minus
Query 93083 TACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTG 93142
|||| || ||||| |||||| || || || |||||||| || |||| ||| ||| |
Sbjct 11772 TACAGCAAACACGCGAAGTCGCAGTGCAAGCCCTCGTCTCGCGAGATCAGCTCGTTGGAG 11713
Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTACC 93201
|| || | || || | | || || || || ||||||||||| | ||| ||||| ||
Sbjct 11712 AAAGTCAGTCCCGGCATTAAACCGCGCTTTTTAAGCCAAAATATCG-CGCAGAAACTCCC 11654
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
|| || || || || |||||| ||||| ||||| || || || || ||| ||||
Sbjct 11653 CGAGAAGAAAATCCCCTCCACGCAGGCAAAGGCCACGATTCGCTCCGCGAAAGACTCGGA 11594
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
| | ||||||| | | ||||| | ||| || ||| | || || | || ||
Sbjct 11593 ---GCCGTCGATCCATCTCAGGGCCCACTGGGCCTTCTTCGCGACGCAGGGGATGGTGTC 11537
Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381
||| |||| || ||| | |||||| || || ||||| || |||| | ||
Sbjct 11536 GATCGCGTGGAAGAGGCGGTGCTTCTCGTCGGAGTCCTTGATGTACGTCTCGAGAAGGAG 11477
Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441
||||| || || |||| ||||| || || || ||||| |||||||| | ||
Sbjct 11476 GCTGTACATCTCGGAGTGGATGTTCTCAATGGCGATCTGGAACCCGTAGAAGGCGCGGGC 11417
Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501
|| | || ||| || || | ||| ||| | ||||||||||| ||| || |||||
Sbjct 11416 CTCGGCGACCTGGACCTCCTTCATAAACCTCCCAGCGAGATTTTCAAGGACGATGCCATC 11357
Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTT 93561
||| || || || || || | || ||| | || || |||| | || ||
Sbjct 11356 GGAGGCAGCGAAGAAGGCGAGAATGTGCGAGACGAAGTGCCTCTCGCCGTCGGATAGGGC 11297
Query 93562 ATCCCAAT--CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619
||||| | ||||| || | | || ||||| || ||| | ||||| || |||||
Sbjct 11296 TTCCCAGTGGCGGAT--GTCCTGGCATAGGTCGACCTCCTCGGCGGTCCAGAAGGATGCC 11239
Query 93620 TCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACA-AAACG 93678
|| || || |||||||| |||||||| || | || || || ||||| || ||| || ||
Sbjct 11238 TCGGCCTTCTTGTACATTTCCCATATTTCCGGGTACTGGATCGGAAACAT-ACAGAAGCG 11180
Query 93679 ATTAGGGTTATCTTTTAGTAACGGCTCT 93706
| |||||| ||| | |||||||
Sbjct 11179 GTCCGGGTTAGGAGCTAGCAGCGGCTCT 11152
>seq162
Length=725586
Score = 91.5 bits (100), Expect = 2e-13
Identities = 73/87 (84%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGA 126320
||||||||| ||||||||||||||||||||||||| | ||| |||||| | || || |
Sbjct 649998 ACAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGG 650057
Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347
|||||||||| || ||||| ||||||
Sbjct 650058 GCGTGGGTTCAAATCCCACTTCTGACA 650084
>seq52
Length=1194851
Score = 91.5 bits (100), Expect = 2e-13
Identities = 73/87 (84%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGCG 126323
|||||| ||||||||||||||||||||||||| | ||| |||||| | || || | |||
Sbjct 1165250 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCG 1165309
Query 126324 TGGGTTCGAACCCCACACCTGACAAAT 126350
||||||| || ||||| |||||||||
Sbjct 1165310 TGGGTTCAAATCCCACTTCTGACAAAT 1165336
>seq408
Length=406475
Score = 89.7 bits (98), Expect = 6e-13
Identities = 83/103 (81%), Gaps = 3/103 (3%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGCG 126323
|||||| ||||||||||||||||||||||||| | ||| |||||| | || || | |||
Sbjct 396016 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCG 396075
Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366
||||||| || ||||| ||||| | || |||| |||||||
Sbjct 396076 TGGGTTCAAATCCCACTTCTGAC-ATTTGCTATTTTAATTTTT 396117
>seq3
Length=3914344
Score = 87.8 bits (96), Expect = 2e-12
Identities = 71/85 (84%), Gaps = 2/85 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322
||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | ||
Sbjct 2862343 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGC 2862284
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
|||||||| || ||||| ||||||
Sbjct 2862283 GTGGGTTCAAATCCCACTTCTGACA 2862259
>seq308
Length=496331
Score = 86.0 bits (94), Expect = 7e-12
Identities = 70/84 (83%), Gaps = 2/84 (2%)
Strand=Plus/Minus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGCG 126323
|||||| ||||||||||||||||||||||||| | ||| |||||| | || || | |||
Sbjct 873 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCG 814
Query 126324 TGGGTTCGAACCCCACACCTGACA 126347
||||||| || ||||| ||||||
Sbjct 813 TGGGTTCAAATCCCACTTCTGACA 790
>seq139
Length=803459
Score = 86.0 bits (94), Expect = 7e-12
Identities = 70/84 (83%), Gaps = 2/84 (2%)
Strand=Plus/Minus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| |||||||||||||||||||||||||||||| | |||||| || | |||||||
Sbjct 764595 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 764538
Query 126328 TTCGAACCCCACACCTGACAAATT 126351
||| || |||||| ||| ||||||
Sbjct 764537 TTCAAATCCCACAGCTGTCAAATT 764514
>seq83
Length=992008
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/85 (82%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324
|| ||| |||||||||||||||||||||||||||||| | |||||| || | ||||
Sbjct 860746 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGGAAGGGCGT 860803
Query 126325 GGGTTCGAACCCCACACCTGACAAA 126349
|||||| || |||||| ||| ||||
Sbjct 860804 GGGTTCAAATCCCACAGCTGTCAAA 860828
>seq12
Length=1676446
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/88 (82%), Gaps = 2/88 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCTCGGGAGC 126322
||||||| ||||||||||||||||||||||||| | ||| ||||| ||| | | ||
Sbjct 461661 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGAAAGAGGGC 461720
Query 126323 GTGGGTTCGAACCCCACACCTGACAAAT 126350
|||||||| || ||||| |||||||||
Sbjct 461721 GTGGGTTCAAATCCCACTTCTGACAAAT 461748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556845611621680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |