Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq202 322 9e-83
seq1330 313 5e-80
seq801 313 5e-80
>seq202
Length=624202
Score = 322 bits (356), Expect = 9e-83
Identities = 596/865 (69%), Gaps = 12/865 (1%)
Strand=Plus/Minus
Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343
|||| || ||| || || ||| |||||||||||||| || |||| |||||||||
Sbjct 31941 GATCCAGTACCCAGAAATATGGGAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGC 31882
Query 42344 CGAGGAGATTGACCTGGCCAAGGACA-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAA 42402
||||||| | ||||| | |||||| | ||| | ||||| | || || || ||| |
Sbjct 31881 CGAGGAGGTCGACCTATGCCAGGACATCCGCCAG-TGGGAAGCCCTATCCGACGGCGAGA 31823
Query 42403 AGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGA 42462
| ||| || |||| || ||||||||||| ||||| |||||||| ||| ||| |
Sbjct 31822 GGCACTTCGTCTCGCACATTCTCGCCTTCTTCGCTGCCTCCGACGGCATTGTCCTTGAAA 31763
Query 42463 ACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCT 42522
| || || ||||| ||||| ||||| ||| | ||||| ||| ||||||||| |
Sbjct 31762 ATCTCGCTGGGAGGTTTATGAAGGAGGTCCAGGTCGCCGAGGCCCGCGCCTTCTACGGGT 31703
Query 42523 TCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACA 42582
||||||| ||||| |||||| | ||||| ||| ||||| | || ||| | |||||||
Sbjct 31702 TCCAGATCGCCATTGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTCGAGACGTACA 31643
Query 42583 TCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCA 42642
|| ||| ||| |||| || | || ||| | || || || || || || ||| ||
Sbjct 31642 TCAAGGACTCCGACGAGAAGCACCGCCTCTTCCACGCGATCGACACCATCCCTTGCGTCG 31583
Query 42643 AGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGA 42702
||||||||| | ||||| || | |||||||| | |||| | |||| |||
Sbjct 31582 CGAAGAAGGCCCAGTGGGCCCTGAGATGGATCGACGGCTCCGA---GTCTTTCGCGGAGC 31526
Query 42703 GGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCT 42762
| | ||||||||| || ||| ||||| || ||||||||||| ||| | | || |
Sbjct 31525 GAATCGTAGCCTTTGCCTGCGTGGAGGGGATTTTCTTCTCGGGGAGTTTCTGCGCGATAT 31466
Query 42763 TCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822
| ||||| || || | | ||||| ||||| || ||||| ||||| || |||
Sbjct 31465 TTTGGCTTAAAAAGCGCGGTTTAATGCCGGGACTGACTTTCTCCAACGAGCTGATCTCGC 31406
Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA 42882
| |||||||| |||| | ||||| || || | |||| || | || ||| | |
Sbjct 31405 GAGACGAGGGCTTGCACTGCGACTTCGCGTGTTTGCTGTATTC---ACTGCTGAGGAAGA 31349
Query 42883 AGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGG-AGGCCGTGGAGATCGAGAAGGAG 42941
||| |||| ||||| | | ||| | |||| | || ||||||||||||| |||
Sbjct 31348 AGCTGAGCGAGGATCGGGTGATGTCGATCGT-ACGGAACGCGGTGGAGATCGAGAGAGAG 31290
Query 42942 TTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAA 43000
||| | | ||||| |||||| | ||||| || |||||| ||| || ||| |||
Sbjct 31289 TTCGTGTGCGACGCGCTG-CCGTGTGCGCTGGTGGGGATGAACGGCGATCTGATGGGCAC 31231
Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAA 43060
||||||| ||| ||| || || | || ||| || | |||| | || | |||||
Sbjct 31230 GTACATCGAGTTCGTGGCGGATCGGCTGCTGGGCTCGTTGGGATACGGCAAGATGTACAA 31171
Query 43061 CACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120
| | ||||||||||| |||||| ||| || |||| ||||||||||| ||
Sbjct 31170 TGTCCAGAACCCCTTCGACTGGATGGAGCTGATCAGCCTGCAGGGGAAGACCAACTTCTT 31111
Query 43121 CGAGAAGCGCGTCGCCGACTACCAG 43145
||||||||||||| ||| || |||
Sbjct 31110 TGAGAAGCGCGTCGGCGAGTATCAG 31086
>seq1330
Length=73179
Score = 313 bits (346), Expect = 5e-80
Identities = 594/865 (69%), Gaps = 12/865 (1%)
Strand=Plus/Plus
Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343
|||| || ||| ||| || ||| |||||||||||||| || ||| |||||||||
Sbjct 26196 GATCCAGTACCCGGAAATATGGGAAATGTACAAGAAGGCCGAGGCATCCTTCTGGACCGC 26255
Query 42344 CGAGGAGATTGACCTGGCCAAGGACA-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAA 42402
||||||| | ||||| | |||||| | ||| |||||| | || || || ||| |
Sbjct 26256 CGAGGAGGTCGACCTATGCCAGGACATCCGCCA-CTGGGAAGCCCTATCCGACGGCGAGA 26314
Query 42403 AGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGA 42462
| ||| || |||| || ||||||||||| ||||| || ||||| ||| ||| |
Sbjct 26315 GGCACTTCGTCTCGCACATTCTCGCCTTCTTCGCTGCCTCCGATGGCATCGTCCTTGAAA 26374
Query 42463 ACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCT 42522
| || || ||||| ||||| ||||| ||| | ||||| ||| ||||||||| |
Sbjct 26375 ATCTCGCTGGGAGGTTTATGAAGGAGGTCCAGGTCGCCGAGGCCCGCGCCTTCTACGGGT 26434
Query 42523 TCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACA 42582
||||||| ||||| |||||| | ||||| ||| ||||| | || ||| | |||||||
Sbjct 26435 TCCAGATCGCCATTGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTCGAGACGTACA 26494
Query 42583 TCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCA 42642
|| ||| ||| |||| || | || ||| | || || || || || |||||| ||
Sbjct 26495 TCAAGGACTCCGACGAGAAGCACCGCCTCTTCCACGCGATCGACACCATCCCCTGCGTCG 26554
Query 42643 AGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGA 42702
||||||||| | ||||| || | |||||||| | |||| | |||| |||
Sbjct 26555 CGAAGAAGGCCCAGTGGGCCCTGAGATGGATCGACGGCTCCGA---GTCTTTCGCGGAGC 26611
Query 42703 GGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCT 42762
| | || |||||| || ||| ||||| || ||||||||||| ||| | | || |
Sbjct 26612 GAATCGTGGCCTTTGCCTGCGTGGAGGGGATTTTCTTCTCGGGGAGTTTCTGCGCGATAT 26671
Query 42763 TCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822
| ||||| || || | | ||||| ||||| || ||||| ||||| || |||
Sbjct 26672 TTTGGCTTAAAAAGCGCGGTTTAATGCCGGGACTGACTTTCTCCAACGAGCTGATCTCGC 26731
Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA 42882
| |||||||| |||| | ||||| || || | |||| || | || ||| | |
Sbjct 26732 GAGACGAGGGCTTGCACTGCGACTTCGCGTGTTTGCTGTATTC---ACTGCTGAGGAAGA 26788
Query 42883 AGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGG-AGGCCGTGGAGATCGAGAAGGAG 42941
||| | |||| ||||| | | ||| | |||| | || ||||||||||||| ||||
Sbjct 26789 AGCTCAGCGAGGATCGGGTTAAGTCGATCGT-ACGGAACGCGGTGGAGATCGAGAGGGAG 26847
Query 42942 TTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAA 43000
||| | | ||||| |||||| | ||||| || |||||| ||| || ||| |||
Sbjct 26848 TTCGTGTGCGACGCGCTG-CCGTGTGCGCTGGTGGGGATGAACGGCGATCTGATGGGCAC 26906
Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAA 43060
||||||| ||| ||| || || | || ||| || | |||| | | | |||||
Sbjct 26907 GTACATCGAGTTCGTGGCGGATCGGCTGCTGGGCTCGTTGGGATACGACAAGATGTACAA 26966
Query 43061 CACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120
| | ||| ||||| | |||||| ||| || |||| ||||||||||| ||
Sbjct 26967 TGTCCAGAACCCGTTCGATTGGATGGAGCTGATCAGCCTGCAGGGGAAGACCAACTTCTT 27026
Query 43121 CGAGAAGCGCGTCGCCGACTACCAG 43145
||||||||||||| ||| || |||
Sbjct 27027 TGAGAAGCGCGTCGGCGAGTATCAG 27051
Score = 313 bits (346), Expect = 5e-80
Identities = 594/865 (69%), Gaps = 12/865 (1%)
Strand=Plus/Minus
Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343
|||| || ||| ||| || ||| |||||||||||||| || ||| |||||||||
Sbjct 46984 GATCCAGTACCCGGAAATATGGGAAATGTACAAGAAGGCCGAGGCATCCTTCTGGACCGC 46925
Query 42344 CGAGGAGATTGACCTGGCCAAGGACA-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAA 42402
||||||| | ||||| | |||||| | ||| |||||| | || || || ||| |
Sbjct 46924 CGAGGAGGTCGACCTATGCCAGGACATCCGCCA-CTGGGAAGCCCTATCCGACGGCGAGA 46866
Query 42403 AGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGA 42462
| ||| || |||| || ||||||||||| ||||| || ||||| ||| ||| |
Sbjct 46865 GGCACTTCGTCTCGCACATTCTCGCCTTCTTCGCTGCCTCCGATGGCATCGTCCTTGAAA 46806
Query 42463 ACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCT 42522
| || || ||||| ||||| ||||| ||| | ||||| ||| ||||||||| |
Sbjct 46805 ATCTCGCTGGGAGGTTTATGAAGGAGGTCCAGGTCGCCGAGGCCCGCGCCTTCTACGGGT 46746
Query 42523 TCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACA 42582
||||||| ||||| |||||| | ||||| ||| ||||| | || ||| | |||||||
Sbjct 46745 TCCAGATCGCCATTGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTCGAGACGTACA 46686
Query 42583 TCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCA 42642
|| ||| ||| |||| || | || ||| | || || || || || |||||| ||
Sbjct 46685 TCAAGGACTCCGACGAGAAGCACCGCCTCTTCCACGCGATCGACACCATCCCCTGCGTCG 46626
Query 42643 AGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGA 42702
||||||||| | ||||| || | |||||||| | |||| | |||| |||
Sbjct 46625 CGAAGAAGGCCCAGTGGGCCCTGAGATGGATCGACGGCTCCGA---GTCTTTCGCGGAGC 46569
Query 42703 GGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCT 42762
| | || |||||| || ||| ||||| || ||||||||||| ||| | | || |
Sbjct 46568 GAATCGTGGCCTTTGCCTGCGTGGAGGGGATTTTCTTCTCGGGGAGTTTCTGCGCGATAT 46509
Query 42763 TCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822
| ||||| || || | | ||||| ||||| || ||||| ||||| || |||
Sbjct 46508 TTTGGCTTAAAAAGCGCGGTTTAATGCCGGGACTGACTTTCTCCAACGAGCTGATCTCGC 46449
Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA 42882
| |||||||| |||| | ||||| || || | |||| || | || ||| | |
Sbjct 46448 GAGACGAGGGCTTGCACTGCGACTTCGCGTGTTTGCTGTATTC---ACTGCTGAGGAAGA 46392
Query 42883 AGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGG-AGGCCGTGGAGATCGAGAAGGAG 42941
||| | |||| ||||| | | ||| | |||| | || ||||||||||||| ||||
Sbjct 46391 AGCTCAGCGAGGATCGGGTTAAGTCGATCGT-ACGGAACGCGGTGGAGATCGAGAGGGAG 46333
Query 42942 TTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAA 43000
||| | | ||||| |||||| | ||||| || |||||| ||| || ||| |||
Sbjct 46332 TTCGTGTGCGACGCGCTG-CCGTGTGCGCTGGTGGGGATGAACGGCGATCTGATGGGCAC 46274
Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAA 43060
||||||| ||| ||| || || | || ||| || | |||| | | | |||||
Sbjct 46273 GTACATCGAGTTCGTGGCGGATCGGCTGCTGGGCTCGTTGGGATACGACAAGATGTACAA 46214
Query 43061 CACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120
| | ||| ||||| | |||||| ||| || |||| ||||||||||| ||
Sbjct 46213 TGTCCAGAACCCGTTCGATTGGATGGAGCTGATCAGCCTGCAGGGGAAGACCAACTTCTT 46154
Query 43121 CGAGAAGCGCGTCGCCGACTACCAG 43145
||||||||||||| ||| || |||
Sbjct 46153 TGAGAAGCGCGTCGGCGAGTATCAG 46129
>seq801
Length=188201
Score = 313 bits (346), Expect = 5e-80
Identities = 594/865 (69%), Gaps = 12/865 (1%)
Strand=Plus/Plus
Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343
|||| || ||| ||| || ||| |||||||||||||| || ||| |||||||||
Sbjct 11197 GATCCAGTACCCGGAAATATGGGAAATGTACAAGAAGGCCGAGGCATCCTTCTGGACCGC 11256
Query 42344 CGAGGAGATTGACCTGGCCAAGGACA-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAA 42402
||||||| | ||||| | |||||| | ||| |||||| | || || || ||| |
Sbjct 11257 CGAGGAGGTCGACCTATGCCAGGACATCCGCCA-CTGGGAAGCCCTATCCGACGGCGAGA 11315
Query 42403 AGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGA 42462
| ||| || |||| || ||||||||||| ||||| || ||||| ||| ||| |
Sbjct 11316 GGCACTTCGTCTCGCACATTCTCGCCTTCTTCGCTGCCTCCGATGGCATCGTCCTTGAAA 11375
Query 42463 ACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCT 42522
| || || ||||| ||||| ||||| ||| | ||||| ||| ||||||||| |
Sbjct 11376 ATCTCGCTGGGAGGTTTATGAAGGAGGTCCAGGTCGCCGAGGCCCGCGCCTTCTACGGGT 11435
Query 42523 TCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACA 42582
||||||| ||||| |||||| | ||||| ||| ||||| | || ||| | |||||||
Sbjct 11436 TCCAGATCGCCATTGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTCGAGACGTACA 11495
Query 42583 TCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCA 42642
|| ||| ||| |||| || | || ||| | || || || || || |||||| ||
Sbjct 11496 TCAAGGACTCCGACGAGAAGCACCGCCTCTTCCACGCGATCGACACCATCCCCTGCGTCG 11555
Query 42643 AGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGA 42702
||||||||| | ||||| || | |||||||| | |||| | |||| |||
Sbjct 11556 CGAAGAAGGCCCAGTGGGCCCTGAGATGGATCGACGGCTCCGA---GTCTTTCGCGGAGC 11612
Query 42703 GGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCT 42762
| | || |||||| || ||| ||||| || ||||||||||| ||| | | || |
Sbjct 11613 GAATCGTGGCCTTTGCCTGCGTGGAGGGGATTTTCTTCTCGGGGAGTTTCTGCGCGATAT 11672
Query 42763 TCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822
| ||||| || || | | ||||| ||||| || ||||| ||||| || |||
Sbjct 11673 TTTGGCTTAAAAAGCGCGGTTTAATGCCGGGACTGACTTTCTCCAACGAGCTGATCTCGC 11732
Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA 42882
| |||||||| |||| | ||||| || || | |||| || | || ||| | |
Sbjct 11733 GAGACGAGGGCTTGCACTGCGACTTCGCGTGTTTGCTGTATTC---ACTGCTGAGGAAGA 11789
Query 42883 AGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGG-AGGCCGTGGAGATCGAGAAGGAG 42941
||| | |||| ||||| | | ||| | |||| | || ||||||||||||| ||||
Sbjct 11790 AGCTCAGCGAGGATCGGGTTAAGTCGATCGT-ACGGAACGCGGTGGAGATCGAGAGGGAG 11848
Query 42942 TTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAA 43000
||| | | ||||| |||||| | ||||| || |||||| ||| || ||| |||
Sbjct 11849 TTCGTGTGCGACGCGCTG-CCGTGTGCGCTGGTGGGGATGAACGGCGATCTGATGGGCAC 11907
Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAA 43060
||||||| ||| ||| || || | || ||| || | |||| | | | |||||
Sbjct 11908 GTACATCGAGTTCGTGGCGGATCGGCTGCTGGGCTCGTTGGGATACGACAAGATGTACAA 11967
Query 43061 CACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120
| | ||| ||||| | |||||| ||| || |||| ||||||||||| ||
Sbjct 11968 TGTCCAGAACCCGTTCGATTGGATGGAGCTGATCAGCCTGCAGGGGAAGACCAACTTCTT 12027
Query 43121 CGAGAAGCGCGTCGCCGACTACCAG 43145
||||||||||||| ||| || |||
Sbjct 12028 TGAGAAGCGCGTCGGCGAGTATCAG 12052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944313443148320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |