Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 1e-24
seq15 127 5e-24
seq819 123 6e-23
seq580 123 6e-23
seq54 123 6e-23
seq146 122 2e-22
seq59 118 3e-21
seq215 114 3e-20
seq1309 113 1e-19
seq139 109 1e-18
seq281 104 6e-17
seq100 104 6e-17
seq687 102 2e-16
seq269 86.0 1e-11
>seq1
Length=4167794
Score = 129 bits (142), Expect = 1e-24
Identities = 171/235 (73%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||| | ||| || | ||||| ||| ||||| ||||| || ||||
Sbjct 1162373 CATG-CCACCACGGAGACGAAGCACCAAATGAAGAGTGGACTCTTTCTGGATGTTGTAGT 1162431
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|||| || ||||| ||||| || | || |||||||| ||||| || | ||| ||
Sbjct 1162432 CGGCAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGCCTCTGCTGGTCCG 1162491
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418
|||||| || || || || || || || || |||||||| || || | ||| |||
Sbjct 1162492 GTGGGATGCCCTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTC- 1162550
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| |||||||| || || ||||||||||| || |||||
Sbjct 1162551 --TCCACCTCAAGGGTGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATTTGCAT 1162603
>seq15
Length=1624393
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || ||||| | ||| |||||||| | || ||||| || || || || || ||
Sbjct 1057157 CCGCCACGGAGACGAAGAACGAGATGGAGGGTAGACTCTTTCTGAATGTTGTAATCCGCA 1057216
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || |||| ||||| || |||||||||| | ||| || | ||||
Sbjct 1057217 AGGGTACGACCATCCTCTAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGTGGG 1057276
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || || || ||||| || || ||||| || || || |||| || |||| ||
Sbjct 1057277 ATCCCCTCCTTGTCCTGAATCTTAGCTTTGACATTGTCAATAGTGTCAGAGCTC---TCA 1057333
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| |||||||||||||| ||||| ||||| || |||||||||||
Sbjct 1057334 ACCTCGAGAGTGATCGTCTTCCCTGTCAGTGTCTTCACAAATATCTGCAT 1057383
Score = 127 bits (140), Expect = 5e-24
Identities = 174/242 (72%), Gaps = 6/242 (2%)
Strand=Plus/Plus
Query 288236 TTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATAT 288295
|||| | || || || ||||| | ||| |||||||| | || || || ||||| |
Sbjct 1074594 TTCAGAAATCACCGCCACGGAGACGAAGGACGAGATGGAGGGTAGACTCCTTCTGGATGT 1074653
Query 288296 TATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTT 288355
|||| || || || ||||| || || || | ||||| || || |||||||| | ||| |
Sbjct 1074654 TATAATCTGCAAGTGTGCGACCATCCTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCT 1074713
Query 288356 GAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC-- 288413
| |||||| ||||| ||||||||||| || ||||| || || || |||| ||
Sbjct 1074714 GGTCCGGTGGGATCCCTTCCTTATCCTGGATCTTAGCTTTGACATTGTCAATAGTGTCAG 1074773
Query 288414 -GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA 288472
|||| || || || || || || || ||||| || || ||||| |||||||||||||
Sbjct 1074774 AGCTC---TCAACCTCCAGGGTAATTGTTTTCCCAGTTAGGGTCTTCACGAATATCTGCA 1074830
Query 288473 TT 288474
||
Sbjct 1074831 TT 1074832
Score = 123 bits (136), Expect = 6e-23
Identities = 147/197 (75%), Gaps = 12/197 (6%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| || |||||||| ||||| || || || || || || || || ||||| || |||
Sbjct 1075325 TCTTTCTGAATATTATAATCGGCTAGGGTTCGGCCATCCTCCAACTGCTTTCCGGCAAAG 1075384
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| | ||| || || ||| ||||| || ||||| ||||| || || || |||
Sbjct 1075385 ATCAGCCTCTGCTGG---TCCGGGGGAATTCCCTCCTTATCTTGGATCTTGGCCTTGACG 1075441
Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| || |||| || |||| || ||||| || || |||||||||||||| || ||
Sbjct 1075442 TTGTCAATAGTGTCCGAGCTC---TCGACTTCCAGAGTAATCGTCTTCCCGGTTAGGGTT 1075498
Query 288457 TTGACGAATATCTGCAT 288473
|||||||| ||||||||
Sbjct 1075499 TTGACGAAGATCTGCAT 1075515
Score = 113 bits (124), Expect = 1e-19
Identities = 142/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || |||||||| || ||||| ||||| || ||||| || || ||||||
Sbjct 1057878 TCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACCGTCCTCCAATTGCTTGCCGGCGAAG 1057937
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || || || || || ||||| ||||| || || || |||||
Sbjct 1057938 ATAAGCCTCTGCTGGTCCGGAGGAATCCCCTCCTTATCTTGGATCTTGGCCTTGACGTTG 1057997
Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || | |||| ||| || || || | || |||||||||||||| || || |||
Sbjct 1057998 TCGATCGTATCGGAGCTC---TCGACCTCCAAAGTTATCGTCTTCCCGGTTAGGGTTTTG 1058054
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 1058055 ACGAAGATCTGCAT 1058068
Score = 111 bits (122), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || ||||| | || || ||||||| || ||| || |||||||| || || ||
Sbjct 1075517 CCTCCTCGGAGACGGAGGACAAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCCGCC 1075576
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || ||||| ||||| || || |||||||| || | ||| ||| ||
Sbjct 1075577 AAGGTTCGGCCATCTTCCAATTGCTTGCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 1075636
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT--A 288424
|| || || ||||||||||| || || || ||||| || || | || || | ||| |
Sbjct 1075637 ATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTAT--CTGAACTCTCGA 1075694
Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || | || |||||||||||||| || || || ||||| ||||||||
Sbjct 1075695 CCTCCAAGGTTATCGTCTTCCCGGTTAGGGTTTTAACGAAAATCTGCAT 1075743
Score = 107 bits (118), Expect = 5e-18
Identities = 143/195 (73%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || || || || | || | |||||| || ||||| || || |||||
Sbjct 1075097 TCCTTTTGGATGTTGTAATCCGCCAATGTCCTTCCGTCCTCCAATTGCTTACCAGCGAAA 1075156
Query 288343 ATCAGACGCTGTTGAGAATC-TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||| | ||| | || | ||||||||| || ||||||||||| || || ||||| ||
Sbjct 1075157 ATCAATCTCTGCT-AGTCTGGTGGGATTCCCTCCTTATCCTGGATCTTGGCCTTCACATT 1075215
Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || | ||| |||| || || ||||| || || |||||||| || || || ||
Sbjct 1075216 ATCGATGGTATCAGAGCTC---TCGACCTCGAGAGTAATTGTCTTCCCCGTTAGGGTTTT 1075272
Query 288459 GACGAATATCTGCAT 288473
||| || ||||||||
Sbjct 1075273 GACAAAAATCTGCAT 1075287
Score = 84.2 bits (92), Expect = 5e-11
Identities = 136/195 (70%), Gaps = 7/195 (4%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || || || || || || | || || || ||||| || || || ||
Sbjct 1057649 TCCTTTTGGATGTTGTAATCCGCAAGAGTCCTGCCATCCTCCAATTGCTTACCAGCAAAA 1057708
Query 288343 ATCAGACGCTGTTGAGAATCTGGG----ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|| | | ||| || |||||| ||||| || ||||| ||||| || || || ||
Sbjct 1057709 ATTAATCTCTGCTGG---TCTGGGGGGGATTCCCTCCTTATCTTGGATCTTTGCCTTGAC 1057765
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||| || || | ||| ||| || || | || || |||||||||||||| || ||
Sbjct 1057766 GTTATCGATCGTATCAGAACTTTCGACCTCCAAAGTAATTGTCTTCCCGGTCAGGGTTTT 1057825
Query 288459 GACGAATATCTGCAT 288473
||| || ||||||||
Sbjct 1057826 GACAAAGATCTGCAT 1057840
>seq819
Length=180711
Score = 123 bits (136), Expect = 6e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | ||||| ||||||| ||| || || ||||| || |||||||||
Sbjct 10414 CCACCGCGGAGGCGGAGTACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 10355
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| || || | || || ||||| ||||||| | ||| || ||
Sbjct 10354 AGGGTCCTTCCATCCTCGAGCTGCTTACCTGCAAAGATCAACCTCTGCTGGTCCGGAGGA 10295
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423
|| || || || ||||||||||| || || || || || |||| ||| ||| ||
Sbjct 10294 ATGCCCTCCTTGTCCTGGATTTTAGCCTTGACATTGTCAATAGTGTCGGAGCTC---TCC 10238
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | || || ||||||||||| || ||||||||||| || |||||
Sbjct 10237 ACTTCCAAAGTAATGGTCTTCCCGGTAAGGGTCTTGACGAAGATTTGCAT 10188
Score = 123 bits (136), Expect = 6e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | ||||| ||||||| ||| || || ||||| || |||||||||
Sbjct 177840 CCACCGCGGAGGCGGAGTACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 177899
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| || || | || || ||||| ||||||| | ||| || ||
Sbjct 177900 AGGGTCCTTCCATCCTCGAGCTGCTTACCTGCAAAGATCAACCTCTGCTGGTCCGGAGGA 177959
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || || || ||||||||||| || || || || || |||| || |||| ||
Sbjct 177960 ATGCCCTCCTTGTCCTGGATTTTAGCCTTGACATTGTCAATAGTGTCGGAGCTC---TCC 178016
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | || || ||||||||||| || ||||||||||| || |||||
Sbjct 178017 ACTTCCAAAGTAATGGTCTTCCCGGTAAGGGTCTTGACGAAGATTTGCAT 178066
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || || || | ||| || || ||||| || |||||||||
Sbjct 10186 CCACCACGGAGACGGAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 10127
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || || || ||||| | || || ||||||
Sbjct 10126 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAATATCAGCCTTTGCTG---GTCTGGG 10070
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||| || || ||||| || ||||| || || || || | ||| |||
Sbjct 10069 GGAATACCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCA 10010
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| |||||||| || || || || ||||||||
Sbjct 10009 ACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTTTTCACAAAGATCTGCAT 9960
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || || || | ||| || || ||||| || |||||||||
Sbjct 178068 CCACCACGGAGACGGAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 178127
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || || || ||||| | || || ||||||
Sbjct 178128 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAATATCAGCCTTTGCTG---GTCTGGG 178184
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||| || || ||||| || ||||| || || || || | ||| |||
Sbjct 178185 GGAATACCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCA 178244
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| |||||||| || || || || ||||||||
Sbjct 178245 ACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTTTTCACAAAGATCTGCAT 178294
>seq580
Length=281551
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || ||||| || || || || || ||||| | || ||||| ||||||
Sbjct 199585 TCCTTTTGGATGTTGTAGTCTGCAAGGGTTCGGCCATCTTCGAGCTGCTTTCCAGCGAAG 199526
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || ||||| ||||| || |||||||| || || || |||||
Sbjct 199525 ATCAGACGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 199466
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || || || ||||| ||||| ||||| ||||| ||||| || |||
Sbjct 199465 TCGATGGTGTCAGATGACTCCACCTCGAGGGTGATGGTCTTGCCGGTAAGAGTTTTCACG 199406
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 199405 AAGATTTGCAT 199395
Score = 118 bits (130), Expect = 3e-21
Identities = 144/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || || || || || || ||||| | || ||||| ||||||
Sbjct 199813 TCTTTCTGGATGTTGTAATCCGCAAGGGTACGGCCATCTTCGAGCTGCTTTCCAGCGAAG 199754
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||||| || ||||| || || ||||| || || || |||
Sbjct 199753 ATCAGACGCTGCTG---GTCTGGGGGAATCCCTTCCTTGTCTTGGATCTTGGCCTTGACG 199697
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || || || ||||| ||||| ||||| ||||| || |||||
Sbjct 199696 TTGTCGATGGTGTCAGATGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTA 199637
Query 288460 ACGAATATCTGCATT 288474
|| || |||||||||
Sbjct 199636 ACAAAGATCTGCATT 199622
Score = 114 bits (126), Expect = 3e-20
Identities = 168/235 (71%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||| | | || | ||| | ||| || || ||||| || ||||
Sbjct 200309 CATG-CCACCACGGAGACGCAAAACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGT 200251
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|||| || ||||| ||||| || | || ||||| || ||||| || | ||| ||
Sbjct 200250 CGGCAAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCTG 200191
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418
|||||| || || ||||| || || || || |||||||| || || | ||| |||
Sbjct 200190 GTGGGATGCCCTCCTTATCTTGAATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTC- 200132
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||||||||| || ||||||||||| || |||||
Sbjct 200131 --TCGACCTCAAGGGTGATGGTCTTCCCGGTAAGGGTCTTGACGAAGATTTGCAT 200079
>seq54
Length=1192742
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || ||||| || || || || || ||||| | || ||||| ||||||
Sbjct 263236 TCCTTTTGGATGTTGTAGTCTGCAAGGGTTCGGCCATCTTCGAGCTGCTTTCCAGCGAAG 263177
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || ||||| ||||| || |||||||| || || || |||||
Sbjct 263176 ATCAGACGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 263117
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || || || ||||| ||||| ||||| ||||| ||||| || |||
Sbjct 263116 TCGATGGTGTCAGATGACTCCACCTCGAGGGTGATGGTCTTGCCGGTAAGAGTTTTCACG 263057
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 263056 AAGATTTGCAT 263046
Score = 118 bits (130), Expect = 3e-21
Identities = 144/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || || || || || || ||||| | || ||||| ||||||
Sbjct 263464 TCTTTCTGGATGTTGTAATCCGCAAGGGTACGGCCATCTTCGAGCTGCTTTCCAGCGAAG 263405
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||||| || ||||| || || ||||| || || || |||
Sbjct 263404 ATCAGACGCTGCTG---GTCTGGGGGAATCCCTTCCTTGTCTTGGATCTTGGCCTTGACG 263348
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || || || ||||| ||||| ||||| ||||| || |||||
Sbjct 263347 TTGTCGATGGTGTCAGATGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTA 263288
Query 288460 ACGAATATCTGCATT 288474
|| || |||||||||
Sbjct 263287 ACAAAGATCTGCATT 263273
Score = 114 bits (126), Expect = 3e-20
Identities = 168/235 (71%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||| | | || | ||| | ||| || || ||||| || ||||
Sbjct 263960 CATG-CCACCACGGAGACGCAAAACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGT 263902
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|||| || ||||| ||||| || | || ||||| || ||||| || | ||| ||
Sbjct 263901 CGGCAAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCTG 263842
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418
|||||| || || ||||| || || || || |||||||| || || | ||| |||
Sbjct 263841 GTGGGATGCCCTCCTTATCTTGAATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTC- 263783
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||||||||| || ||||||||||| || |||||
Sbjct 263782 --TCGACCTCAAGGGTGATGGTCTTCCCGGTAAGGGTCTTGACGAAGATTTGCAT 263730
>seq146
Length=786261
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | || || || || | || || || ||||| || |||||||||
Sbjct 97633 CCACCGCGGAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 97574
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | || || || |||||||| || ||||| || ||||
Sbjct 97573 AGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGG 97514
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || || ||||| || || || | ||| || || ||
Sbjct 97513 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACC 97454
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||||||||| || || || || ||||| ||||||||
Sbjct 97453 TCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 97407
>seq59
Length=1152742
Score = 118 bits (130), Expect = 3e-21
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | ||||| ||||||| ||| || || ||||| || ||||| |||
Sbjct 892911 CCACCGCGGAGGCGGAGTACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 892970
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| || || | || || ||||| ||||||| | ||| || ||
Sbjct 892971 AGGGTCCTTCCATCCTCGAGCTGCTTACCTGCAAAGATCAACCTCTGCTGGTCCGGAGGA 893030
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || || || ||||||||||| || || || || || |||| || |||| ||
Sbjct 893031 ATGCCCTCCTTGTCCTGGATTTTAGCCTTGACATTGTCAATAGTGTCGGAGCTC---TCC 893087
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | || || ||||||||||| || ||||||||||| || |||||
Sbjct 893088 ACTTCCAAAGTAATGGTCTTCCCGGTAAGGGTCTTGACGAAGATTTGCAT 893137
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || || || | ||| || || ||||| || |||||||||
Sbjct 893139 CCACCACGGAGACGGAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 893198
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || || || ||||| | || || ||||||
Sbjct 893199 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAATATCAGCCTTTGCTG---GTCTGGG 893255
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||| || || ||||| || ||||| || || || || | ||| |||
Sbjct 893256 GGAATACCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCA 893315
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| |||||||| || || || || ||||||||
Sbjct 893316 ACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTTTTCACAAAGATCTGCAT 893365
Score = 102 bits (112), Expect = 2e-16
Identities = 143/198 (72%), Gaps = 12/198 (6%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || ||||| || || |||||||| || ||||| | || || || |||||
Sbjct 731016 TTCCTTTTGAATGTTATAATCAGCAAGCGTGCGACCATCTTCAAGCTGCTTACCAGCGAA 730957
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||| || | ||| || || ||| || || || ||||||||||| || || || ||
Sbjct 730956 GATGAGCCTCTGCTGG---TCCGGGGGAATGCCCTCCTTATCCTGGATCTTTGCCTTAAC 730900
Query 288399 GTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455
|| || || | ||| ||| ||| ||||| | ||||| ||||| ||||| || ||
Sbjct 730899 ATTATCAATGGTATCCGAGCT---TTCAACTTCCAAGGTGATTGTCTTACCGGTAAGGGT 730843
Query 288456 CTTGACGAATATCTGCAT 288473
|||||| || || |||||
Sbjct 730842 CTTGACAAAGATTTGCAT 730825
>seq215
Length=606900
Score = 114 bits (126), Expect = 3e-20
Identities = 142/193 (74%), Gaps = 6/193 (3%)
Strand=Plus/Plus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343
|||| ||||| || ||||| || || || || |||||||| | || || || |||||||
Sbjct 55606 CTTTCTGGATGTTGTAGTCAGCTAGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGA 55665
Query 288344 TCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGT 288400
|||| ||||| || || ||| || || || || |||||||| || || || || |
Sbjct 55666 TCAGGCGCTGCTG---GTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACAT 55722
Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460
| || |||| ||||| || || || || ||||| ||||||||||| || || || |
Sbjct 55723 TGTCGATAGTGTCGCTGCTCTCGACCTCAAGAGTGATGGTCTTCCCGGTTAGGGTTTTCA 55782
Query 288461 CGAATATCTGCAT 288473
|||| ||||||||
Sbjct 55783 CGAAAATCTGCAT 55795
>seq1309
Length=78448
Score = 113 bits (124), Expect = 1e-19
Identities = 139/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343
|||| ||||| || ||||| || || ||||| |||||||| | || || || |||||||
Sbjct 62323 CTTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGA 62382
Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403
| || ||||| || || || || || || |||||||| || || || || || |
Sbjct 62383 TGAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 62442
Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
| || | ||||| || || ||||| ||||| ||||||||||| || || || ||||
Sbjct 62443 CAATGGTGTCGCTGCTCTCGACCTCGAGGGTGATGGTCTTCCCGGTTAGGGTTTTCACGA 62502
Query 288464 ATATCTGCAT 288473
| ||||||||
Sbjct 62503 AAATCTGCAT 62512
>seq139
Length=803459
Score = 109 bits (120), Expect = 1e-18
Identities = 137/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||| || || ||||| |||||||| | || || || ||||||||
Sbjct 751895 TTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATG 751954
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || || || || || || |||||||| || || || || || ||
Sbjct 751955 AGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 752014
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAT 288465
|| | ||||| || || ||||| ||||| ||||||||||| || || || |||||
Sbjct 752015 ATGGTGTCGCTGCTCTCGACCTCGAGAGTGATGGTCTTCCCGGTTAGGGTTTTCACGAAA 752074
Query 288466 ATCTGCAT 288473
||||||||
Sbjct 752075 ATCTGCAT 752082
>seq281
Length=531459
Score = 104 bits (114), Expect = 6e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | || || || || | || || || ||||| || ||||||||
Sbjct 453603 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCA 453544
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | || || || |||||||| || ||||| || |||
Sbjct 453543 AGGGTCCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGCGGG 453484
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || || ||||| || || || | || || || ||
Sbjct 453483 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCTGAAGACTCAACC 453424
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||||||||| || || || || ||||| ||||||||
Sbjct 453423 TCCAGAGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 453377
>seq100
Length=933141
Score = 104 bits (114), Expect = 6e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | || || || || | || || || ||||| || ||||| ||
Sbjct 405037 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCA 404978
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | || || || |||||||| || ||||| || |||
Sbjct 404977 AGGGTCCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 404918
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || || ||||| || || || | ||| || || ||
Sbjct 404917 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACC 404858
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||||||||| || || || || ||||| ||||||||
Sbjct 404857 TCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 404811
>seq687
Length=229775
Score = 102 bits (112), Expect = 2e-16
Identities = 143/198 (72%), Gaps = 12/198 (6%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || ||||| || || |||||||| || ||||| | || || || |||||
Sbjct 53535 TTCCTTTTGAATGTTATAATCAGCAAGCGTGCGACCATCTTCAAGCTGCTTACCAGCGAA 53476
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||| || | ||| || || ||| || || || ||||||||||| || || || ||
Sbjct 53475 GATGAGCCTCTGCTGG---TCCGGGGGAATGCCCTCCTTATCCTGGATCTTTGCCTTAAC 53419
Query 288399 GTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455
|| || || | ||| ||| ||| ||||| | ||||| ||||| ||||| || ||
Sbjct 53418 ATTATCAATGGTATCCGAGCT---TTCAACTTCCAAGGTGATTGTCTTACCGGTAAGGGT 53362
Query 288456 CTTGACGAATATCTGCAT 288473
|||||| || || |||||
Sbjct 53361 CTTGACAAAGATTTGCAT 53344
>seq269
Length=538530
Score = 86.0 bits (94), Expect = 1e-11
Identities = 185/273 (68%), Gaps = 4/273 (1%)
Strand=Plus/Minus
Query 167079 CACATCTCGATTCCGGCGATTTTCGCTATCGCGTATGGTTTGTTAGTGGGTTCGAGAAAT 167138
||||||| ||| |||||||| || || || ||||| | ||| || || || || |
Sbjct 485216 CACATCTTGATCCCGGCGATCTTGGCAATGGCGTACCACTCGTTGGTAGGCTCCAGTGGT 485157
Query 167139 CCTGTCATCAGATA--TTCTTCCTTGATAGGATTTTGAGCTTCTTTTGGGTAAATGCAAC 167196
|| |||| || || |||| || ||| || | |||| ||| |||||||||||
Sbjct 485156 CCCGTCAGCA-ATGCGTTCT-CCGGGATGGGCTGAGGAGCGAATTTGGGGTAAATGCAGG 485099
Query 167197 TGCTACCGAGAAACACGAGTTTTTTCACTCCGAACATTTTGGACGCATGAATGACATTCG 167256
| || ||||||| ||| || || ||||| || | || || | |||||||| |
Sbjct 485098 AGGAGCCAAGAAACAAGAGCTTCTTGACTCCAAATCGGTAGGCGGCGTCTATGACATTGG 485039
Query 167257 TCTGAATCATCAGATTATCGTGAATAAAATCGCCCCCGAAGGAGTTGTTCGCGTGAATAC 167316
|||| ||| ||||| || || ||||| || | | | |||||| |||||||| |
Sbjct 485038 TCTGGATCTGGAGATTGACGGCGATGAAATCCGCCGGGTACGTGTTGTTGGCGTGAATGC 484979
Query 167317 CTCCTACTTTTGCAGCCGCGAGAAATACGTATT 167349
| || ||||| || || || || | ||| |||
Sbjct 484978 CGCCGACTTTAGCGGCGGCAAGGATCACGAATT 484946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179621420549396
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |