Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq269 86.0 1e-11 >seq269 Length=538530 Score = 86.0 bits (94), Expect = 1e-11 Identities = 185/273 (68%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 149223 CACATCTCGATTCCGGCGATTTTCGCTATCGCGTATGGTTTGTTAGTGGGTTCGAGAAAT 149282 ||||||| ||| |||||||| || || || ||||| | ||| || || || || | Sbjct 485216 CACATCTTGATCCCGGCGATCTTGGCAATGGCGTACCACTCGTTGGTAGGCTCCAGTGGT 485157 Query 149283 CCTGTCATCAGATA--TTCTTCCTTGATAGGATTTTGAGCTTCTTTTGGGTAAATGCAAC 149340 || |||| || || |||| || ||| || | |||| ||| ||||||||||| Sbjct 485156 CCCGTCAGCA-ATGCGTTCT-CCGGGATGGGCTGAGGAGCGAATTTGGGGTAAATGCAGG 485099 Query 149341 TGCTACCGAGAAACACGAGTTTTTTCACTCCGAACATTTTGGACGCATGAATGACATTCG 149400 | || ||||||| ||| || || ||||| || | || || | |||||||| | Sbjct 485098 AGGAGCCAAGAAACAAGAGCTTCTTGACTCCAAATCGGTAGGCGGCGTCTATGACATTGG 485039 Query 149401 TCTGAATCATCAGATTATCGTGAATAAAATCGCCCCCGAAGGAGTTGTTCGCGTGAATAC 149460 |||| ||| ||||| || || ||||| || | | | |||||| |||||||| | Sbjct 485038 TCTGGATCTGGAGATTGACGGCGATGAAATCCGCCGGGTACGTGTTGTTGGCGTGAATGC 484979 Query 149461 CTCCTACTTTTGCAGCCGCGAGAAATACGTATT 149493 | || ||||| || || || || | ||| ||| Sbjct 484978 CGCCGACTTTAGCGGCGGCAAGGATCACGAATT 484946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102849166921700