Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq269 86.0 1e-11
>seq269
Length=538530
Score = 86.0 bits (94), Expect = 1e-11
Identities = 185/273 (68%), Gaps = 4/273 (1%)
Strand=Plus/Minus
Query 149223 CACATCTCGATTCCGGCGATTTTCGCTATCGCGTATGGTTTGTTAGTGGGTTCGAGAAAT 149282
||||||| ||| |||||||| || || || ||||| | ||| || || || || |
Sbjct 485216 CACATCTTGATCCCGGCGATCTTGGCAATGGCGTACCACTCGTTGGTAGGCTCCAGTGGT 485157
Query 149283 CCTGTCATCAGATA--TTCTTCCTTGATAGGATTTTGAGCTTCTTTTGGGTAAATGCAAC 149340
|| |||| || || |||| || ||| || | |||| ||| |||||||||||
Sbjct 485156 CCCGTCAGCA-ATGCGTTCT-CCGGGATGGGCTGAGGAGCGAATTTGGGGTAAATGCAGG 485099
Query 149341 TGCTACCGAGAAACACGAGTTTTTTCACTCCGAACATTTTGGACGCATGAATGACATTCG 149400
| || ||||||| ||| || || ||||| || | || || | |||||||| |
Sbjct 485098 AGGAGCCAAGAAACAAGAGCTTCTTGACTCCAAATCGGTAGGCGGCGTCTATGACATTGG 485039
Query 149401 TCTGAATCATCAGATTATCGTGAATAAAATCGCCCCCGAAGGAGTTGTTCGCGTGAATAC 149460
|||| ||| ||||| || || ||||| || | | | |||||| |||||||| |
Sbjct 485038 TCTGGATCTGGAGATTGACGGCGATGAAATCCGCCGGGTACGTGTTGTTGGCGTGAATGC 484979
Query 149461 CTCCTACTTTTGCAGCCGCGAGAAATACGTATT 149493
| || ||||| || || || || | ||| |||
Sbjct 484978 CGCCGACTTTAGCGGCGGCAAGGATCACGAATT 484946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102849166921700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |