Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq1296 156 1e-33 >seq1296 Length=80039 Score = 156 bits (172), Expect = 1e-33 Identities = 227/321 (71%), Gaps = 0/321 (0%) Strand=Plus/Minus Query 14644 TGGGTGCGCAACTATTGTTGGTGATGAAACGCAACTTGTGCAAGTGAACAGCAATCCTTC 14703 ||| || ||||| || || ||||| |||| || | | | || | || |||||||| || Sbjct 28566 TGGCTGTGCAACGATAGTGGGTGAAAAAACTCAGCGTATACAGATTAATAGCAATCCGTC 28507 Query 14704 TGGCGCGAGCTTTAAGGTAAAAGATGAGTCAGGTGTGATTGTTGCGCAAGGTAAGACCCC 14763 |||||| ||| || |||||||| || ||| |||| ||||| || || || Sbjct 28506 TGGCGCTGAATTTTCCGTCAAAGATGAAAAGGGATCGATCATTGCTCAAGGAAAAACACC 28447 Query 14764 ACAAGGTGTAACGCTCGCCAAGTCAGATGGTAGCTATTTTGGCAAAAAGAGCTACCAGAT 14823 || || | || | | || || || ||| | |||||||| ||||| || || | || Sbjct 28446 TCAGGGAATTACATTAGAAAAATCTGAGGGTGGTTATTTTGGTAAAAAAAGTTATGAAAT 28387 Query 14824 CACTATGGAGAAGGATGGGTATGAACCAGTTACCCTGCCAATCAAAGCCAATGCTAATGG 14883 ||| || ||||| || | |||| |||||| | || | ||||| | ||||||||| Sbjct 28386 TACTTTGACAAAGGAAGGATTAAAACCGGTTACCTTACCGTTAAAAGCGAGTGCTAATGG 28327 Query 14884 TTGGTATATTGGTGGGAACCTTGTGTTTGGTGGGTTAATTGGTTGGCTTGCTGTAGATCC 14943 |||||| ||| ||| || || | |||||||| ||||| |||||| | ||| || || Sbjct 28326 ATGGTATGTTGCTGGTAATTTTTTCTTTGGTGGATTAATAGGTTGGTTAATTGTTGACCC 28267 Query 14944 ATTTAATGGTGGAATGTATAC 14964 |||||||||||| |||||||| Sbjct 28266 ATTTAATGGTGGTATGTATAC 28246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137526036436152