Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq768 114 1e-20 >seq768 Length=200800 Score = 114 bits (126), Expect = 1e-20 Identities = 123/162 (76%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 61143 TCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCCTGCTTCAACTTTCTGTTTAGCG 61202 || || || ||||| || || || ||||| ||| | || || || || ||||| || || Sbjct 199474 TCGTCGTTAGGCATCGCCTTGACAGCCAGGTCATAACCAGCCTCTACCTTCTGCTTTGCT 199533 Query 61203 GATTCTTCGTTATAACCCCAGATTACCAGAATAGCTACTACGTTTTCTTTGCTTACTGCT 61262 ||||||||||| || ||||| || ||||| || ||||||||||||||| | | || Sbjct 199534 GATTCTTCGTTGTATCCCCAAATAACCAGGATTTTAACTACGTTTTCTTTGTTCAGAACT 199593 Query 61263 TTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATTCTCC 61304 || || ||||||||||||||||||||| |||| || ||| Sbjct 199594 TTAAGGTATTTAGTGATGCGACGTGCCAT--TTTGTTTTTCC 199633 Score = 111 bits (122), Expect = 2e-19 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 61122 TAGTTTGCCAGTCCGACAGAGTCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCCT 61181 |||||||| | || || ||| || || |||||||| || | ||||| ||| | || Sbjct 48452 TAGTTTGCAATACCTTTAGCGTCGTCGTTAGGCATTGCCTTGATAGCCAGGTCATAACCA 48511 Query 61182 GCTTCAACTTTCTGTTTAGCGGATTCTTCGTTATAACCCCAGATTACCAGAATAGCTACT 61241 | || || ||||| || || || |||||||| || ||||| || ||| | || ||| Sbjct 48512 TCCTCGACCTTCTGCTTTGCTGACTCTTCGTTGTATCCCCAAATAACCGGGATCTTAACT 48571 Query 61242 ACGTTTTCTTTGCTTACTGCTTTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATTC 61301 |||||||||||| | | |||| || |||||||||||||||||||||| |||| || Sbjct 48572 ACGTTTTCTTTGTTCAGAACTTTAAGGTCTTTAGTGATGCGACGTGCCAT--TTTGTTTT 48629 Query 61302 TCC 61304 ||| Sbjct 48630 TCC 48632 Score = 111 bits (122), Expect = 2e-19 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 61122 TAGTTTGCCAGTCCGACAGAGTCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCCT 61181 |||||||| | || || ||| || || |||||||| || | ||||| ||| | || Sbjct 98788 TAGTTTGCAATACCTTTAGCGTCGTCGTTAGGCATTGCCTTGATAGCCAGGTCATAACCA 98847 Query 61182 GCTTCAACTTTCTGTTTAGCGGATTCTTCGTTATAACCCCAGATTACCAGAATAGCTACT 61241 | || || ||||| || || || |||||||| || ||||| || ||| | || ||| Sbjct 98848 TCCTCGACCTTCTGCTTTGCTGACTCTTCGTTGTATCCCCAAATAACCGGGATCTTAACT 98907 Query 61242 ACGTTTTCTTTGCTTACTGCTTTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATTC 61301 |||||||||||| | | |||| || |||||||||||||||||||||| |||| || Sbjct 98908 ACGTTTTCTTTGTTCAGAACTTTAAGGTCTTTAGTGATGCGACGTGCCAT--TTTGTTTT 98965 Query 61302 TCC 61304 ||| Sbjct 98966 TCC 98968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532395078528160