Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_012740.1
Length=166418
Score E
Sequences producing significant alignments: (Bits) Value
seq768 114 1e-20
>seq768
Length=200800
Score = 114 bits (126), Expect = 1e-20
Identities = 123/162 (76%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 61143 TCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCCTGCTTCAACTTTCTGTTTAGCG 61202
|| || || ||||| || || || ||||| ||| | || || || || ||||| || ||
Sbjct 199474 TCGTCGTTAGGCATCGCCTTGACAGCCAGGTCATAACCAGCCTCTACCTTCTGCTTTGCT 199533
Query 61203 GATTCTTCGTTATAACCCCAGATTACCAGAATAGCTACTACGTTTTCTTTGCTTACTGCT 61262
||||||||||| || ||||| || ||||| || ||||||||||||||| | | ||
Sbjct 199534 GATTCTTCGTTGTATCCCCAAATAACCAGGATTTTAACTACGTTTTCTTTGTTCAGAACT 199593
Query 61263 TTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATTCTCC 61304
|| || ||||||||||||||||||||| |||| || |||
Sbjct 199594 TTAAGGTATTTAGTGATGCGACGTGCCAT--TTTGTTTTTCC 199633
Score = 111 bits (122), Expect = 2e-19
Identities = 135/183 (74%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 61122 TAGTTTGCCAGTCCGACAGAGTCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCCT 61181
|||||||| | || || ||| || || |||||||| || | ||||| ||| | ||
Sbjct 48452 TAGTTTGCAATACCTTTAGCGTCGTCGTTAGGCATTGCCTTGATAGCCAGGTCATAACCA 48511
Query 61182 GCTTCAACTTTCTGTTTAGCGGATTCTTCGTTATAACCCCAGATTACCAGAATAGCTACT 61241
| || || ||||| || || || |||||||| || ||||| || ||| | || |||
Sbjct 48512 TCCTCGACCTTCTGCTTTGCTGACTCTTCGTTGTATCCCCAAATAACCGGGATCTTAACT 48571
Query 61242 ACGTTTTCTTTGCTTACTGCTTTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATTC 61301
|||||||||||| | | |||| || |||||||||||||||||||||| |||| ||
Sbjct 48572 ACGTTTTCTTTGTTCAGAACTTTAAGGTCTTTAGTGATGCGACGTGCCAT--TTTGTTTT 48629
Query 61302 TCC 61304
|||
Sbjct 48630 TCC 48632
Score = 111 bits (122), Expect = 2e-19
Identities = 135/183 (74%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 61122 TAGTTTGCCAGTCCGACAGAGTCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCCT 61181
|||||||| | || || ||| || || |||||||| || | ||||| ||| | ||
Sbjct 98788 TAGTTTGCAATACCTTTAGCGTCGTCGTTAGGCATTGCCTTGATAGCCAGGTCATAACCA 98847
Query 61182 GCTTCAACTTTCTGTTTAGCGGATTCTTCGTTATAACCCCAGATTACCAGAATAGCTACT 61241
| || || ||||| || || || |||||||| || ||||| || ||| | || |||
Sbjct 98848 TCCTCGACCTTCTGCTTTGCTGACTCTTCGTTGTATCCCCAAATAACCGGGATCTTAACT 98907
Query 61242 ACGTTTTCTTTGCTTACTGCTTTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATTC 61301
|||||||||||| | | |||| || |||||||||||||||||||||| |||| ||
Sbjct 98908 ACGTTTTCTTTGTTCAGAACTTTAAGGTCTTTAGTGATGCGACGTGCCAT--TTTGTTTT 98965
Query 61302 TCC 61304
|||
Sbjct 98966 TCC 98968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 532395078528160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |