Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq157 111 2e-19 seq222 86.0 8e-12 >seq157 Length=750868 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 6600 CTTGTGTAGGCTCAAACGCCTTGAAAGTATTTGATTGTTCACCATCTTCAAACAAAGTAT 6659 |||| || || | ||| || | ||| ||||||| |||| ||||||||| ||||||| Sbjct 399381 CTTGAGTTGGGTTAAA-GCATGGAATGTATTTGCACCATCACTATCTTCAAATAAAGTAT 399323 Query 6660 TCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCTCCACCTAAGATACCTGCTACAC 6719 |||||||||||||| |||||||| || | || || | || | | | | || | Sbjct 399322 CTTCTACAGTAGCACCATGAATAGCGCATAACAGAGCAACGCCCTACACTTCAACAACTC 399263 Query 6720 CCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAGCCCT-GTAGGAAGAGTAAGAAG 6778 ||||||||||||| | ||| | || || || || || || | | | || | | ||| Sbjct 399262 CCATCATATGAAATGAGTTCAATGTTCAATTATGAAACCCTTGGAAAAAAAAAGATGAAT 399203 Query 6779 CGGAATATCGCTGCAACACCAAACGACGGCGCAAAGAACCAACTGGACTG 6828 | ||||| ||||| |||||||| ||| ||||||||||||| ||||| Sbjct 399202 CAAAATATAGCTGCTACACCAAAATTGGGCACAAAGAACCAACTAGACTG 399153 >seq222 Length=596275 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 7742 GCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGAAGCGTATTGGAAGATCAGACGA 7801 || ||||||||||| | ||||| | || ||||| ||| ||||| ||||||| | Sbjct 106920 GCTAGGAAGAAGTGTAAAGAACGACAATTATTGAAACTAGCATATTGAAAGATCAATCAG 106861 Query 7802 CCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAA 7861 ||||| || || ||| |||| ||||| |||||||| | ||| ||||| || || || ||| Sbjct 106860 CCAAAATAACCATGAACAGCTACGATATTGTAGGTTTTTTCCTCTTGCCCAAATTTGTAA 106801 Query 7862 CC 7863 || Sbjct 106800 CC 106799 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 7742 GCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGAAGCGTATTGGAAGATCAGACGA 7801 || ||||||||||| | ||||| | || ||||| ||| ||||| ||||||| | Sbjct 179691 GCTAGGAAGAAGTGTAAAGAACGACAATTATTGAAACTAGCATATTGAAAGATCAATCAG 179750 Query 7802 CCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAA 7861 ||||| || || ||| |||| ||||| |||||||| | ||| ||||| || || || ||| Sbjct 179751 CCAAAATAACCATGAACAGCTACGATATTGTAGGTTTTTTCCTCTTGCCCAAATTTGTAA 179810 Query 7862 CC 7863 || Sbjct 179811 CC 179812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622107831546080