Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq157 111 2e-19
seq222 86.0 8e-12
>seq157
Length=750868
Score = 111 bits (122), Expect = 2e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 6600 CTTGTGTAGGCTCAAACGCCTTGAAAGTATTTGATTGTTCACCATCTTCAAACAAAGTAT 6659
|||| || || | ||| || | ||| ||||||| |||| ||||||||| |||||||
Sbjct 399381 CTTGAGTTGGGTTAAA-GCATGGAATGTATTTGCACCATCACTATCTTCAAATAAAGTAT 399323
Query 6660 TCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCTCCACCTAAGATACCTGCTACAC 6719
|||||||||||||| |||||||| || | || || | || | | | | || |
Sbjct 399322 CTTCTACAGTAGCACCATGAATAGCGCATAACAGAGCAACGCCCTACACTTCAACAACTC 399263
Query 6720 CCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAGCCCT-GTAGGAAGAGTAAGAAG 6778
||||||||||||| | ||| | || || || || || || | | | || | | |||
Sbjct 399262 CCATCATATGAAATGAGTTCAATGTTCAATTATGAAACCCTTGGAAAAAAAAAGATGAAT 399203
Query 6779 CGGAATATCGCTGCAACACCAAACGACGGCGCAAAGAACCAACTGGACTG 6828
| ||||| ||||| |||||||| ||| ||||||||||||| |||||
Sbjct 399202 CAAAATATAGCTGCTACACCAAAATTGGGCACAAAGAACCAACTAGACTG 399153
>seq222
Length=596275
Score = 86.0 bits (94), Expect = 8e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 7742 GCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGAAGCGTATTGGAAGATCAGACGA 7801
|| ||||||||||| | ||||| | || ||||| ||| ||||| ||||||| |
Sbjct 106920 GCTAGGAAGAAGTGTAAAGAACGACAATTATTGAAACTAGCATATTGAAAGATCAATCAG 106861
Query 7802 CCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAA 7861
||||| || || ||| |||| ||||| |||||||| | ||| ||||| || || || |||
Sbjct 106860 CCAAAATAACCATGAACAGCTACGATATTGTAGGTTTTTTCCTCTTGCCCAAATTTGTAA 106801
Query 7862 CC 7863
||
Sbjct 106800 CC 106799
Score = 86.0 bits (94), Expect = 8e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 7742 GCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGAAGCGTATTGGAAGATCAGACGA 7801
|| ||||||||||| | ||||| | || ||||| ||| ||||| ||||||| |
Sbjct 179691 GCTAGGAAGAAGTGTAAAGAACGACAATTATTGAAACTAGCATATTGAAAGATCAATCAG 179750
Query 7802 CCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAA 7861
||||| || || ||| |||| ||||| |||||||| | ||| ||||| || || || |||
Sbjct 179751 CCAAAATAACCATGAACAGCTACGATATTGTAGGTTTTTTCCTCTTGCCCAAATTTGTAA 179810
Query 7862 CC 7863
||
Sbjct 179811 CC 179812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622107831546080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |