Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_013600.1
Length=45169
Score E
Sequences producing significant alignments: (Bits) Value
seq768 98.7 3e-16
>seq768
Length=200800
Score = 98.7 bits (108), Expect = 3e-16
Identities = 121/163 (74%), Gaps = 2/163 (1%)
Strand=Plus/Minus
Query 40658 ATGAAAACCGAAATGGTTGATAAGCACGAAATCAAGATCGGCGATACGGTAGTTCACAAC 40717
|||||||| || | || |||| |||||||||||||||||||| || ||||||||
Sbjct 199421 ATGAAAACGAAATTAGTGCATAAATCAGAAATCAAGATCGGCGATACTGTGATTCACAAC 199362
Query 40718 GGGGAGCTCCGCACTGTGTGCAAGCGAG-CGTTTAGCATCGATGAATTTATGGGCCTGCT 40776
|| || || ||||| | ||| ||| || | | || ||||||||||||||| ||| |
Sbjct 199361 GGAGAACTTAAAACTGTTGGTAAG-GAGTCGATAACCAACGATGAATTTATGGGTCTGTT 199303
Query 40777 ACTTTGGGGCGACAGCTATCGTCTAGGGTATAAACTGGTTGAG 40819
| | |||||| ||||| || || |||||| ||||||||
Sbjct 199302 GTTGTTCGGCGACTCATATCGCCTGGGTTATAAAATGGTTGAG 199260
Score = 95.1 bits (104), Expect = 3e-15
Identities = 250/370 (68%), Gaps = 14/370 (4%)
Strand=Plus/Plus
Query 26898 ACGGGTTTCTTCTCTGGCATACGGAAGCCGTTGCCG--GTCCATAAGCAGGTCAGCTTCG 26955
|| || ||| | |||||||| ||| ||| ||| ||||| | || || |||||
Sbjct 199810 ACAGGCTTCCTTTCTGGCATGACAAAGTCGT--CCGAAGTCCAAAGACAAGTTTTCTTCG 199867
Query 26956 GATATGAATCGCG-GGCGTTGATGTATTCCGGGAAGAGCGGGTGTACGTCATCATCCGGC 27014
| || | |||||| |||| || || |||||| |||||| |||||| || ||
Sbjct 199868 GGTAAGCATCGCGCGGCGCA-ATATACATCGGGAACCAGGGGTGTGCGTCATTCTCAGGA 199926
Query 27015 AGATATCCCCCATACTCCCACGGGTCGAATGAGTGATCCGGTTTGCGCCACTGGGTG--G 27072
||||| || ||||||||||| || | ||| | ||| || | || ||||| || || |
Sbjct 199927 AGATAGCCGCCATACTCCCAGGGATTGAAAGTGTGGTCAGCCTTTCGCCA--GGCTGATG 199984
Query 27073 ATAGCACACTGCGCGGATTCTCAATCATATATGGCACTTCGAAGAAGTCACCCAGGTAAG 27132
| || || || |||||||||||| || || | ||| | | | ||||| | || |
Sbjct 199985 ACAGGACGCTAACCGGATTCTCAATGATGTAAGTCACACCCAGGCTATCACCGATGTTCG 200044
Query 27133 CGGCGATCTTCGCGGTGCGCACCGCCTTAAGCTGAAAGGCTGGGTCTTTTGCACGCTTGC 27192
|||| ||| |||||| || || || ||| || || || | ||||||||
Sbjct 200045 CGGCAATCCGGGCGGTGGCAACAGCTTTCTCCTGGAATAGCGGATCACGTTTACGCTTGC 200104
Query 27193 GCGGGAAAG-CTGGCGCACCGCTCACTGCCAGATCCGTGCACGGAGGAAACG-CATAGAT 27250
|| |||| | | ||||| || || ||||| || |||||||| || || | |||| ||
Sbjct 200105 -TGGCAAAGTGTCGAGCACCACTAACGGCCAGGTCAGTGCACGGCGGGAAGGCCATA-AT 200162
Query 27251 GATATCTGGC 27260
|| ||| |||
Sbjct 200163 GAAATCCGGC 200172
Score = 87.8 bits (96), Expect = 5e-13
Identities = 224/332 (67%), Gaps = 8/332 (2%)
Strand=Plus/Plus
Query 26933 GGTCCATAAGCAGGTCAGCTTCGGATATGAATCGCG-GGCGTTGATGTATTCCGGGAAGA 26991
|||||| | || || |||||| || | |||||| |||| || || ||||||
Sbjct 48844 GGTCCACAGACAAGTTTTCTTCGGGTAAGCATCGCGCGGCGCA-ATATACATCGGGAACC 48902
Query 26992 GCGGGTGTACGTCATCATCCGGCAGATATCCCCCATACTCCCACGGGTCGAATGAGTGAT 27051
||||| ||||||| || || ||||| || || |||||||| || | ||| |||||||
Sbjct 48903 AGGGGTGCGCGTCATCCTCAGGAAGATAGCCGCCGTACTCCCAGGGATTGAAGGAGTGAT 48962
Query 27052 CCGGTTTGCGCCACTGGGTGGATAGCACACTGCGCGGATTCTCAATCATATATGGCACTT 27111
||||| | |||| | || || || || |||||||||||| || || | |||
Sbjct 48963 TTGGTTTTCTCCACGCAGACGACAGGACGCTCACCGGATTCTCAATGATGTAAGTCACAC 49022
Query 27112 CGAAGAAGTCACCCAGGTAAGCGGCGATCTTCGCGGTGCGCACCGCCTTAAGCTGAAAGG 27171
| | ||||| | || || || ||| |||||| || ||||| ||| ||
Sbjct 49023 CAAGCTCCTCACCAATGTTCGCAGCTATCCGAGCGGTGGCAACAGCCTTCTCCTGGAATA 49082
Query 27172 CTGGGTCTTTTGCACGCTTGCGCGGGAAAGCTG--GCGCACCGCTCACTGCCAGATCCGT 27229
|| || | ||||||| | || |||| || | ||||| || || ||||| || ||
Sbjct 49083 ACGGATCACGTTCACGCTTAC-TGGCAAAG-TGACGAGCACCACTAACAGCCAGGTCAGT 49140
Query 27230 GCACGGA-GGAAACGCATAGATGATATCTGGC 27260
||| ||| ||||| |||| || | ||| |||
Sbjct 49141 GCATGGAGGGAAAGCCATA-ATAAAATCCGGC 49171
Score = 87.8 bits (96), Expect = 5e-13
Identities = 224/332 (67%), Gaps = 8/332 (2%)
Strand=Plus/Plus
Query 26933 GGTCCATAAGCAGGTCAGCTTCGGATATGAATCGCG-GGCGTTGATGTATTCCGGGAAGA 26991
|||||| | || || |||||| || | |||||| |||| || || ||||||
Sbjct 99180 GGTCCACAGACAAGTTTTCTTCGGGTAAGCATCGCGCGGCGCA-ATATACATCGGGAACC 99238
Query 26992 GCGGGTGTACGTCATCATCCGGCAGATATCCCCCATACTCCCACGGGTCGAATGAGTGAT 27051
||||| ||||||| || || ||||| || || |||||||| || | ||| |||||||
Sbjct 99239 AGGGGTGCGCGTCATCCTCAGGAAGATAGCCGCCGTACTCCCAGGGATTGAAGGAGTGAT 99298
Query 27052 CCGGTTTGCGCCACTGGGTGGATAGCACACTGCGCGGATTCTCAATCATATATGGCACTT 27111
||||| | |||| | || || || || |||||||||||| || || | |||
Sbjct 99299 TTGGTTTTCTCCACGCAGACGACAGGACGCTCACCGGATTCTCAATGATGTAAGTCACAC 99358
Query 27112 CGAAGAAGTCACCCAGGTAAGCGGCGATCTTCGCGGTGCGCACCGCCTTAAGCTGAAAGG 27171
| | ||||| | || || || ||| |||||| || ||||| ||| ||
Sbjct 99359 CAAGCTCCTCACCAATGTTCGCAGCTATCCGAGCGGTGGCAACAGCCTTCTCCTGGAATA 99418
Query 27172 CTGGGTCTTTTGCACGCTTGCGCGGGAAAGCTG--GCGCACCGCTCACTGCCAGATCCGT 27229
|| || | ||||||| | || |||| || | ||||| || || ||||| || ||
Sbjct 99419 ACGGATCACGTTCACGCTTAC-TGGCAAAG-TGACGAGCACCACTAACAGCCAGGTCAGT 99476
Query 27230 GCACGGA-GGAAACGCATAGATGATATCTGGC 27260
||| ||| ||||| |||| || | ||| |||
Sbjct 99477 GCATGGAGGGAAAGCCATA-ATAAAATCCGGC 99507
Score = 86.0 bits (94), Expect = 2e-12
Identities = 116/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 40658 ATGAAAACCGAAATGGTTGATAAGCACGAAATCAAGATCGGCGATACGGTAGTTCACAAC 40717
|||||||| || | || |||| || ||||||||||||||||| | ||||||||
Sbjct 48420 ATGAAAACGAAATTAGTGCATAAATCAGAGATCAAGATCGGCGATACCATCATTCACAAC 48361
Query 40718 GGGGAGCTCCGCACTGTGTGCAAGCGAGCGTTTAGCATCGATGAATTTATGGGCCTGCTA 40777
|| ||||| ||||| ||||| | | || | |||||||||||||| ||| |
Sbjct 48360 GGAGAGCTTAAAACTGTTGGCAAGGATTCAATAAGTAGAGATGAATTTATGGGTCTGTTG 48301
Query 40778 CTTTGGGGCGACAGCTATCGTCTAGGGTATAAACTGGTTGAG 40819
||| || ||| |||||| || || || ||| ||||||||
Sbjct 48300 TTTTTCGGGGACTCCTATCGACTTGGTTACAAAATGGTTGAG 48259
Score = 86.0 bits (94), Expect = 2e-12
Identities = 116/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 40658 ATGAAAACCGAAATGGTTGATAAGCACGAAATCAAGATCGGCGATACGGTAGTTCACAAC 40717
|||||||| || | || |||| || ||||||||||||||||| | ||||||||
Sbjct 98756 ATGAAAACGAAATTAGTGCATAAATCAGAGATCAAGATCGGCGATACCATCATTCACAAC 98697
Query 40718 GGGGAGCTCCGCACTGTGTGCAAGCGAGCGTTTAGCATCGATGAATTTATGGGCCTGCTA 40777
|| ||||| ||||| ||||| | | || | |||||||||||||| ||| |
Sbjct 98696 GGAGAGCTTAAAACTGTTGGCAAGGATTCAATAAGTAGAGATGAATTTATGGGTCTGTTG 98637
Query 40778 CTTTGGGGCGACAGCTATCGTCTAGGGTATAAACTGGTTGAG 40819
||| || ||| |||||| || || || ||| ||||||||
Sbjct 98636 TTTTTCGGGGACTCCTATCGACTTGGTTACAAAATGGTTGAG 98595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144415457918004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |