Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1330 163 5e-35
seq801 163 5e-35
seq202 163 5e-35
>seq1330
Length=73179
Score = 163 bits (180), Expect = 5e-35
Identities = 483/736 (66%), Gaps = 18/736 (2%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
|||||| || ||||||||||| |||| || | || ||||| | |||| |||||
Sbjct 27033 CTTCTCAAAGAAGTTGGTCTTCCCCTGCAGGCTGATCAGCTCCATCCAATCGAACGGGTT 26974
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGA--GAGCCGCCAGCAACCTGTCTGCCACAAAT 159766
|| || | || ||| |||| | ||||| ||||| || || ||||| ||
Sbjct 26973 CTGGACATTGTACATCTTGTCGTATCCCAACGAGCC--CAGCAGCCGATCCGCCACGAAC 26916
Query 159767 TCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826
|||||||| | | |||| | || | ||| ||||||| |||| | || ||||| ||
Sbjct 26915 TCGATGTACGTGCCCATCAGATCGCCGTTCATCCCCACCAGCGCACACGGCAGCGCGTCG 26856
Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGC-TTCGGTCACAATCTGCGAGACACGTTCGTA 159885
||| |||||| |||| ||||| ||||| ||| || || ||| | || || || |
Sbjct 26855 CACACGAACTCCCTCTCGATCTCCACCGCGTTCCGT-ACGATCGACTTAACCCGATCCTC 26797
Query 159886 CCCCGGCTTG--CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943
| |||| || | ||| | |||| | ||||| |||||||||||||
Sbjct 26796 GCTGAGCTTCTTCCTCAGCAGTGA-----ATACAGCAAACACGCGAAGTCGCAGTGCAAG 26742
Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003
|||||||| || ||||| | ||||||||| | | || |||||||| | || ||| |
Sbjct 26741 CCCTCGTCTCGCGAGATCAGCTCGTTGGAGAAAGTCAGTCCCGGCATTAAACCGCGCTTT 26682
Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCAAA 160062
|| |||||||| || | |||| || | || | | || || |||||||||||| |||||
Sbjct 26681 TTAAGCCAAAATATCG-CGCAGAAACTCCCCGAGAAGAAAATCCCCTCCACGCAGGCAAA 26623
Query 160063 CGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTC 160122
||||||| | ||| | ||||| | || | | | | |||| || |||||| |
Sbjct 26622 GGCCACGATTCGCTCCGCGAAAGA---CTCGGAGCCGTCGATCCATCTCAGGGCCCACTG 26566
Query 160123 AGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTT 160182
|||||||| |||| ||| || ||| |||| |||| || | | || || ||| |
Sbjct 26565 GGCCTTCTTCGCGACGCAGGGGATGGTGTCGATCGCGTGGAAGAGGCGGTGCTTCTCGTC 26506
Query 160183 CACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGAT 160242
|||||||| || | | || |||||| || | ||| | || || ||
Sbjct 26505 GGAGTCCTTGATGTACGTCTCGAGAAGGAGGCTGTACATCTCGGAGTGGATGTTCTCAAT 26446
Query 160243 GGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCT 160302
||| ||||| || |||||| ||||| ||| ||||||| | |||||
Sbjct 26445 GGCGATCTGGAACCCGTAGAAGGCGCGGGCCTCGGCGACCTGGACCTCCTTCATAAACCT 26386
Query 160303 TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGA 160362
| | ||||| || || | || |||| ||| || ||||| || | | ||| ||
Sbjct 26385 CCCAGCGAGATTTTCAAGGACGATGCCATCGGAGGCAGCGAAGAAGGCGAGAATGTGCGA 26326
Query 160363 GATGAAATGTCTCTCG 160378
|| ||| || ||||||
Sbjct 26325 GACGAAGTGCCTCTCG 26310
Score = 163 bits (180), Expect = 5e-35
Identities = 483/736 (66%), Gaps = 18/736 (2%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
|||||| || ||||||||||| |||| || | || ||||| | |||| |||||
Sbjct 46147 CTTCTCAAAGAAGTTGGTCTTCCCCTGCAGGCTGATCAGCTCCATCCAATCGAACGGGTT 46206
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGA--GAGCCGCCAGCAACCTGTCTGCCACAAAT 159766
|| || | || ||| |||| | ||||| ||||| || || ||||| ||
Sbjct 46207 CTGGACATTGTACATCTTGTCGTATCCCAACGAGCC--CAGCAGCCGATCCGCCACGAAC 46264
Query 159767 TCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826
|||||||| | | |||| | || | ||| ||||||| |||| | || ||||| ||
Sbjct 46265 TCGATGTACGTGCCCATCAGATCGCCGTTCATCCCCACCAGCGCACACGGCAGCGCGTCG 46324
Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGC-TTCGGTCACAATCTGCGAGACACGTTCGTA 159885
||| |||||| |||| ||||| ||||| ||| || || ||| | || || || |
Sbjct 46325 CACACGAACTCCCTCTCGATCTCCACCGCGTTCCGT-ACGATCGACTTAACCCGATCCTC 46383
Query 159886 CCCCGGCTTG--CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943
| |||| || | ||| | |||| | ||||| |||||||||||||
Sbjct 46384 GCTGAGCTTCTTCCTCAGCAGTGA-----ATACAGCAAACACGCGAAGTCGCAGTGCAAG 46438
Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003
|||||||| || ||||| | ||||||||| | | || |||||||| | || ||| |
Sbjct 46439 CCCTCGTCTCGCGAGATCAGCTCGTTGGAGAAAGTCAGTCCCGGCATTAAACCGCGCTTT 46498
Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCAAA 160062
|| |||||||| || | |||| || | || | | || || |||||||||||| |||||
Sbjct 46499 TTAAGCCAAAATATCG-CGCAGAAACTCCCCGAGAAGAAAATCCCCTCCACGCAGGCAAA 46557
Query 160063 CGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTC 160122
||||||| | ||| | ||||| | || | | | | |||| || |||||| |
Sbjct 46558 GGCCACGATTCGCTCCGCGAAAGA---CTCGGAGCCGTCGATCCATCTCAGGGCCCACTG 46614
Query 160123 AGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTT 160182
|||||||| |||| ||| || ||| |||| |||| || | | || || ||| |
Sbjct 46615 GGCCTTCTTCGCGACGCAGGGGATGGTGTCGATCGCGTGGAAGAGGCGGTGCTTCTCGTC 46674
Query 160183 CACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGAT 160242
|||||||| || | | || |||||| || | ||| | || || ||
Sbjct 46675 GGAGTCCTTGATGTACGTCTCGAGAAGGAGGCTGTACATCTCGGAGTGGATGTTCTCAAT 46734
Query 160243 GGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCT 160302
||| ||||| || |||||| ||||| ||| ||||||| | |||||
Sbjct 46735 GGCGATCTGGAACCCGTAGAAGGCGCGGGCCTCGGCGACCTGGACCTCCTTCATAAACCT 46794
Query 160303 TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGA 160362
| | ||||| || || | || |||| ||| || ||||| || | | ||| ||
Sbjct 46795 CCCAGCGAGATTTTCAAGGACGATGCCATCGGAGGCAGCGAAGAAGGCGAGAATGTGCGA 46854
Query 160363 GATGAAATGTCTCTCG 160378
|| ||| || ||||||
Sbjct 46855 GACGAAGTGCCTCTCG 46870
>seq801
Length=188201
Score = 163 bits (180), Expect = 5e-35
Identities = 483/736 (66%), Gaps = 18/736 (2%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
|||||| || ||||||||||| |||| || | || ||||| | |||| |||||
Sbjct 12034 CTTCTCAAAGAAGTTGGTCTTCCCCTGCAGGCTGATCAGCTCCATCCAATCGAACGGGTT 11975
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGA--GAGCCGCCAGCAACCTGTCTGCCACAAAT 159766
|| || | || ||| |||| | ||||| ||||| || || ||||| ||
Sbjct 11974 CTGGACATTGTACATCTTGTCGTATCCCAACGAGCC--CAGCAGCCGATCCGCCACGAAC 11917
Query 159767 TCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826
|||||||| | | |||| | || | ||| ||||||| |||| | || ||||| ||
Sbjct 11916 TCGATGTACGTGCCCATCAGATCGCCGTTCATCCCCACCAGCGCACACGGCAGCGCGTCG 11857
Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGC-TTCGGTCACAATCTGCGAGACACGTTCGTA 159885
||| |||||| |||| ||||| ||||| ||| || || ||| | || || || |
Sbjct 11856 CACACGAACTCCCTCTCGATCTCCACCGCGTTCCGT-ACGATCGACTTAACCCGATCCTC 11798
Query 159886 CCCCGGCTTG--CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943
| |||| || | ||| | |||| | ||||| |||||||||||||
Sbjct 11797 GCTGAGCTTCTTCCTCAGCAGTGA-----ATACAGCAAACACGCGAAGTCGCAGTGCAAG 11743
Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003
|||||||| || ||||| | ||||||||| | | || |||||||| | || ||| |
Sbjct 11742 CCCTCGTCTCGCGAGATCAGCTCGTTGGAGAAAGTCAGTCCCGGCATTAAACCGCGCTTT 11683
Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCAAA 160062
|| |||||||| || | |||| || | || | | || || |||||||||||| |||||
Sbjct 11682 TTAAGCCAAAATATCG-CGCAGAAACTCCCCGAGAAGAAAATCCCCTCCACGCAGGCAAA 11624
Query 160063 CGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTC 160122
||||||| | ||| | ||||| | || | | | | |||| || |||||| |
Sbjct 11623 GGCCACGATTCGCTCCGCGAAAGA---CTCGGAGCCGTCGATCCATCTCAGGGCCCACTG 11567
Query 160123 AGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTT 160182
|||||||| |||| ||| || ||| |||| |||| || | | || || ||| |
Sbjct 11566 GGCCTTCTTCGCGACGCAGGGGATGGTGTCGATCGCGTGGAAGAGGCGGTGCTTCTCGTC 11507
Query 160183 CACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGAT 160242
|||||||| || | | || |||||| || | ||| | || || ||
Sbjct 11506 GGAGTCCTTGATGTACGTCTCGAGAAGGAGGCTGTACATCTCGGAGTGGATGTTCTCAAT 11447
Query 160243 GGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCT 160302
||| ||||| || |||||| ||||| ||| ||||||| | |||||
Sbjct 11446 GGCGATCTGGAACCCGTAGAAGGCGCGGGCCTCGGCGACCTGGACCTCCTTCATAAACCT 11387
Query 160303 TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGA 160362
| | ||||| || || | || |||| ||| || ||||| || | | ||| ||
Sbjct 11386 CCCAGCGAGATTTTCAAGGACGATGCCATCGGAGGCAGCGAAGAAGGCGAGAATGTGCGA 11327
Query 160363 GATGAAATGTCTCTCG 160378
|| ||| || ||||||
Sbjct 11326 GACGAAGTGCCTCTCG 11311
>seq202
Length=624202
Score = 163 bits (180), Expect = 5e-35
Identities = 483/736 (66%), Gaps = 18/736 (2%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
|||||| || ||||||||||| |||| || | || ||||| | |||| |||||
Sbjct 31104 CTTCTCAAAGAAGTTGGTCTTCCCCTGCAGGCTGATCAGCTCCATCCAGTCGAAGGGGTT 31163
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGA--GAGCCGCCAGCAACCTGTCTGCCACAAAT 159766
|| || | || ||| |||| | ||||| ||||| || || ||||| ||
Sbjct 31164 CTGGACATTGTACATCTTGCCGTATCCCAACGAGCC--CAGCAGCCGATCCGCCACGAAC 31221
Query 159767 TCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826
|||||||| | | |||| | || | ||| ||||||| |||| | || ||||| ||
Sbjct 31222 TCGATGTACGTGCCCATCAGATCGCCGTTCATCCCCACCAGCGCACACGGCAGCGCGTCG 31281
Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGC-TTCGGTCACAATCTGCGAGACACGTTCGTA 159885
||| ||||| |||| ||||| ||||| ||| || || ||| | || || || |
Sbjct 31282 CACACGAACTCTCTCTCGATCTCCACCGCGTTCCGT-ACGATCGACATCACCCGATCCTC 31340
Query 159886 CCCCGGCTTG--CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943
| | |||| || | ||| | |||| | ||||| |||||||||||||
Sbjct 31341 GCTCAGCTTCTTCCTCAGCAGTGA-----ATACAGCAAACACGCGAAGTCGCAGTGCAAG 31395
Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003
|||||||| || ||||| | ||||||||| | | || |||||||| | || ||| |
Sbjct 31396 CCCTCGTCTCGCGAGATCAGCTCGTTGGAGAAAGTCAGTCCCGGCATTAAACCGCGCTTT 31455
Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCAAA 160062
|| |||||||| || | |||| || | || | | || || |||||||||||| |||||
Sbjct 31456 TTAAGCCAAAATATCG-CGCAGAAACTCCCCGAGAAGAAAATCCCCTCCACGCAGGCAAA 31514
Query 160063 CGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTC 160122
|| |||| | ||| | ||||| | || | | | | |||| || |||||| |
Sbjct 31515 GGCTACGATTCGCTCCGCGAAAGA---CTCGGAGCCGTCGATCCATCTCAGGGCCCACTG 31571
Query 160123 AGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTT 160182
|||||||| |||| ||| || ||| |||| |||| || | | || || ||| |
Sbjct 31572 GGCCTTCTTCGCGACGCAAGGGATGGTGTCGATCGCGTGGAAGAGGCGGTGCTTCTCGTC 31631
Query 160183 CACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGAT 160242
|||||||| || | | || |||||| || | ||| | || || ||
Sbjct 31632 GGAGTCCTTGATGTACGTCTCGAGAAGGAGGCTGTACATCTCGGAGTGGATGTTCTCAAT 31691
Query 160243 GGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCT 160302
||| ||||| || |||||| ||||| ||| ||||||| | |||||
Sbjct 31692 GGCGATCTGGAACCCGTAGAAGGCGCGGGCCTCGGCGACCTGGACCTCCTTCATAAACCT 31751
Query 160303 TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGA 160362
| | ||||| || || | ||||||| ||| || ||||| || | | ||| ||
Sbjct 31752 CCCAGCGAGATTTTCAAGGACAATGCCGTCGGAGGCAGCGAAGAAGGCGAGAATGTGCGA 31811
Query 160363 GATGAAATGTCTCTCG 160378
|| ||| || ||||||
Sbjct 31812 GACGAAGTGCCTCTCG 31827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795133512141920
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