Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq15 89.7 4e-13 >seq15 Length=1624393 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| || ||||| ||||| || | || ||||| || |||||||||||||| Sbjct 1075289 CCTCCTCTTAATCGCAGAACCAAGTGGAGGGTCGACTCTTTCTGAATATTATAATCGGCT 1075348 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | || |||| ||||| || || ||| |||| || | | |||||| |||| ||| Sbjct 1075349 AGGGTTCGGCCATCCTCCAACTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 1075408 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACT-GTGTCTGCGCTTTCCAC 39671 | || || || || || || || | ||| | | | ||||| | ||| || || Sbjct 1075409 ATTCCCTCCTTATCTTGGATCTTGGCCTTGA-CGTTGTCAATAGTGTCCGAGCTCTCGAC 1075467 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||| |||||| || || || |||| ||||| |||||||||||||| Sbjct 1075468 TTCCAGAGTAATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 1075515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347360362356806