Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_015281.1
Length=179563
Score E
Sequences producing significant alignments: (Bits) Value
seq222 100 3e-16
>seq222
Length=596275
Score = 100 bits (110), Expect = 3e-16
Identities = 96/123 (78%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 168520 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 168579
|||||||| || || ||||| ||| |||| ||||| |||||||| | ||||||||| ||
Sbjct 106799 GGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGTTATTTT 106858
Query 168580 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTT 168639
|| | |||||||| ||||| ||| ||||| || | || || || |||||||||||
Sbjct 106859 GGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTA 106918
Query 168640 GCT 168642
|||
Sbjct 106919 GCT 106921
Score = 100 bits (110), Expect = 3e-16
Identities = 96/123 (78%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 168520 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 168579
|||||||| || || ||||| ||| |||| ||||| |||||||| | ||||||||| ||
Sbjct 179812 GGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGTTATTTT 179753
Query 168580 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTT 168639
|| | |||||||| ||||| ||| ||||| || | || || || |||||||||||
Sbjct 179752 GGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTA 179693
Query 168640 GCT 168642
|||
Sbjct 179692 GCT 179690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 574457931232560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |