Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq222 105 7e-18 seq157 100 3e-16 >seq222 Length=596275 Score = 105 bits (116), Expect = 7e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 164412 GAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACA 164471 |||||||| |||| ||| || || | |||||||| ||||| ||||| ||| |||| Sbjct 106769 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 106828 Query 164472 TACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTC 164531 ||||| || || || | ||| ||||| ||||| | ||||||| ||||| ||| ||| Sbjct 106829 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 106888 Query 164532 AACAACTCCCGTTCCTTGCACTTCTTCCTTGCT 164564 || || | ||||| || ||||||||||| ||| Sbjct 106889 AATAATTGTCGTTCTTTACACTTCTTCCTAGCT 106921 Score = 105 bits (116), Expect = 7e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 164412 GAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACA 164471 |||||||| |||| ||| || || | |||||||| ||||| ||||| ||| |||| Sbjct 179842 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 179783 Query 164472 TACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTC 164531 ||||| || || || | ||| ||||| ||||| | ||||||| ||||| ||| ||| Sbjct 179782 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 179723 Query 164532 AACAACTCCCGTTCCTTGCACTTCTTCCTTGCT 164564 || || | ||||| || ||||||||||| ||| Sbjct 179722 AATAATTGTCGTTCTTTACACTTCTTCCTAGCT 179690 >seq157 Length=750868 Score = 100 bits (110), Expect = 3e-16 Identities = 166/235 (71%), Gaps = 10/235 (4%) Strand=Plus/Plus Query 165640 TCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCAGGTTCCT-TC 165698 ||| || |||||||| || | || ||| || || ||||| || || | ||| | | Sbjct 399152 TCAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTT 399211 Query 165699 TCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCATATGATGGG---TGTTG 165755 | || | ||||| || ||||| || || ||||| | |||||||||||||| ||||| Sbjct 399212 TTTTTTTCCAAGGGTTTCATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTTG 399271 Query 165756 CAG-GTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAATACT 165814 || ||| ||| | ||| || | | || || ||||||| ||| ||||| ||||| Sbjct 399272 AAGTGTA----GGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACT 399327 Query 165815 CTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCTACTCAAG 165869 | | | ||||| |||| | ||||||||| ||| | || ||| || | ||||||| Sbjct 399328 TTATTTGAAGATAGTGATGGTGCAAATACATTCCATGC-TTTAACCCAACTCAAG 399381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556909609876080