Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq222 89.7 6e-13 >seq222 Length=596275 Score = 89.7 bits (98), Expect = 6e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 169111 AATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGA 169170 |||| | || || || || | |||||| || | |||||||| || || ||||| || Sbjct 106762 AATCTGGGAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGA 106821 Query 169171 AGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGC 169230 | ||||||| ||||| || || | ||||| || || || |||| ||||| || ||||| Sbjct 106822 AAAAACCTACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGC 106881 Query 169231 AAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269 |||||||| || | | | | |||||||||||||| Sbjct 106882 TAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTAGC 106920 Score = 89.7 bits (98), Expect = 6e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 169111 AATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGA 169170 |||| | || || || || | |||||| || | |||||||| || || ||||| || Sbjct 179849 AATCTGGGAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGA 179790 Query 169171 AGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGC 169230 | ||||||| ||||| || || | ||||| || || || |||| ||||| || ||||| Sbjct 179789 AAAAACCTACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGC 179730 Query 169231 AAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269 |||||||| || | | | | |||||||||||||| Sbjct 179729 TAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTAGC 179691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564426204855360