Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3 100 3e-16 seq146 87.8 2e-12 >seq3 Length=3914344 Score = 100 bits (110), Expect = 3e-16 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 || |||| ||| ||| | ||| ||||||||| |||| ||||| || |||||||||||| Sbjct 1733679 GATATTGTTGTTGGTTCTGCGCAGAGGTTTGGTGTTCCAATGGGGTATGGAGGTCCTCAT 1733620 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAG-- 158539 || || ||| | || || || | |||| ||||| | ||| || || |||||| | | Sbjct 1733619 GCGGCTTTCCTCGCCACCTCACAAGAGTACAAGAGGATGATGCCAGGGAGAATTATCGGT 1733560 Query 158540 GTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGC 158599 || ||| || || | ||| || || | | | || | ||||| || |||| Sbjct 1733559 GTTAGT--GTTGACTCCTCAGGGAAGCCTGCGTTGCGTATGGCGATGCAGACAAGGGAGC 1733502 Query 158600 AGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACA 158645 |||||||| | || ||||| || ||||| ||||| ||||| || || Sbjct 1733501 AGCATATCCGGAGGGACAAGGCTACCAGCAACATTTGCACTGCTCA 1733456 >seq146 Length=786261 Score = 87.8 bits (96), Expect = 2e-12 Identities = 103/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGAT-GGTCTGG 173009 |||||| || | || ||||||||| ||| || || ||||| || | || | ||||||| Sbjct 94870 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGGTTGGTCTGG 94811 Query 173010 TCTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTT 173069 || ||||| | |||||||| || | || | || ||||||||| ||| || ||||| Sbjct 94810 CCTATTACTCTTTCCTTGTGCATATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTT 94751 Query 173070 CGTTACATCATGGTATAC 173087 || || ||||||||||| Sbjct 94750 TGTAACTTCATGGTATAC 94733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588035160903520