Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq157 105 8e-18 seq222 82.4 9e-11 >seq157 Length=750868 Score = 105 bits (116), Expect = 8e-18 Identities = 167/234 (71%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 183627 TCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTATT 183686 ||||||| |||||||||| || | ||| || |||||||| || ||| ||||| | || Sbjct 399152 TCAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTT 399211 Query 183687 GTTCCTTC--AGGGTTTCCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCT 183744 || ||| |||||||| | || || || || ||| | || |||||||||||||||| | Sbjct 399212 TTTTTTTCCAAGGGTTTC-ATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTT 399270 Query 183745 G--GTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGTAGAGAATACAT 183802 | || || || | || || | | ||||| ||||||| || ||||| |||| | Sbjct 399271 GAAGTGTA--GGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACTT 399328 Query 183803 TGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCACTCAAG 183856 | | ||||||| | || ||||| |||||| | || ||| | | ||||||| Sbjct 399329 TATTTGAAGATAGTGATGGTGCAAATACATTCCATGC-TTTAACCCAACTCAAG 399381 >seq222 Length=596275 Score = 82.4 bits (90), Expect = 9e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 182451 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTC 182510 |||||||| || || ||||| ||| | ||||| || ||||| || | ||||| || || Sbjct 106799 GGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGTTATTTT 106858 Query 182511 GGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 182570 || | |||||||| ||||| || ||||| || | ||||| || ||||||||||| Sbjct 106859 GGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTA 106918 Query 182571 GCT 182573 ||| Sbjct 106919 GCT 106921 Score = 82.4 bits (90), Expect = 9e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 182451 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTC 182510 |||||||| || || ||||| ||| | ||||| || ||||| || | ||||| || || Sbjct 179812 GGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGTTATTTT 179753 Query 182511 GGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 182570 || | |||||||| ||||| || ||||| || | ||||| || ||||||||||| Sbjct 179752 GGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTA 179693 Query 182571 GCT 182573 ||| Sbjct 179692 GCT 179690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611679315991600