Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_015288.1
Length=191195
Score E
Sequences producing significant alignments: (Bits) Value
seq157 105 8e-18
seq222 82.4 9e-11
>seq157
Length=750868
Score = 105 bits (116), Expect = 8e-18
Identities = 167/234 (71%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 183627 TCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTATT 183686
||||||| |||||||||| || | ||| || |||||||| || ||| ||||| | ||
Sbjct 399152 TCAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTT 399211
Query 183687 GTTCCTTC--AGGGTTTCCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCT 183744
|| ||| |||||||| | || || || || ||| | || |||||||||||||||| |
Sbjct 399212 TTTTTTTCCAAGGGTTTC-ATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTT 399270
Query 183745 G--GTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGTAGAGAATACAT 183802
| || || || | || || | | ||||| ||||||| || ||||| |||| |
Sbjct 399271 GAAGTGTA--GGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACTT 399328
Query 183803 TGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCACTCAAG 183856
| | ||||||| | || ||||| |||||| | || ||| | | |||||||
Sbjct 399329 TATTTGAAGATAGTGATGGTGCAAATACATTCCATGC-TTTAACCCAACTCAAG 399381
>seq222
Length=596275
Score = 82.4 bits (90), Expect = 9e-11
Identities = 92/123 (75%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 182451 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTC 182510
|||||||| || || ||||| ||| | ||||| || ||||| || | ||||| || ||
Sbjct 106799 GGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGTTATTTT 106858
Query 182511 GGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 182570
|| | |||||||| ||||| || ||||| || | ||||| || |||||||||||
Sbjct 106859 GGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTA 106918
Query 182571 GCT 182573
|||
Sbjct 106919 GCT 106921
Score = 82.4 bits (90), Expect = 9e-11
Identities = 92/123 (75%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 182451 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTC 182510
|||||||| || || ||||| ||| | ||||| || ||||| || | ||||| || ||
Sbjct 179812 GGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGTTATTTT 179753
Query 182511 GGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 182570
|| | |||||||| ||||| || ||||| || | ||||| || |||||||||||
Sbjct 179752 GGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTA 179693
Query 182571 GCT 182573
|||
Sbjct 179692 GCT 179690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611679315991600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |