Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq157 86.0 7e-12 >seq157 Length=750868 Score = 86.0 bits (94), Expect = 7e-12 Identities = 163/235 (69%), Gaps = 10/235 (4%) Strand=Plus/Plus Query 166607 TCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCT 166666 ||| || |||||||| || | || ||| || || |||| || || ||||| || | Sbjct 399152 TCAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTT 399211 Query 166667 TTTCCTTC-AAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGG---TGTAG 166722 ||| ||| |||| || || || || ||| ||||| |||||||||||||||| ||| | Sbjct 399212 TTTTTTTCCAAGGGTTTCATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTTG 399271 Query 166723 CAG-GTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACT 166781 || ||| || | ||| || | | || || ||||||| ||| ||||| | ||| Sbjct 399272 AAGTGTA----GGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACT 399327 Query 166782 CTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAG 166836 | | | ||||| |||| |||||||| ||| | || || || | ||||||| Sbjct 399328 TTATTTGAAGATAGTGATGGTGCAAATACATTCCATGC-TTTAACCCAACTCAAG 399381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563645426151680