Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_016071.1 Length=145964 Score E Sequences producing significant alignments: (Bits) Value seq768 118 1e-21 >seq768 Length=200800 Score = 118 bits (130), Expect = 1e-21 Identities = 311/467 (67%), Gaps = 16/467 (3%) Strand=Plus/Minus Query 6253 AAGCCAGATATTATCTTTGCATTTCCGCCATGTACCGATATGGCAGTTAGCGGTGCTGCT 6312 ||||| ||| | || | || || ||||| || || || |||| ||||| |||||| Sbjct 200174 AAGCCGGATTTCATTATGGCCTTCCCGCCGTGCACTGACCTGGCCGTTAGTGGTGCTCGA 200115 Query 6313 CATTTTGCCTCAAAAGCAGCC--AAA---GACCCTCTTTTTCAGGTCAAAGCCGTGAATA 6367 || |||||| |||| | ||| || || || || |||| ||||| || | Sbjct 200114 CACTTTGCC-----AGCAAGCGTAAACGTGATCCGCTATTCCAGGAGAAAGCTGTTGCCA 200060 Query 6368 CAGCTAAGGTTGCAGCAATGTTAGGAGATAAGTACGGGTGTC-CATACATGATAGAGAAC 6426 | || | |||| || | | || |||| | |||||| | ||||| || ||||| Sbjct 200059 CCGCCCGGATTGCCGCGAACATCGGTGATA-GCCTGGGTGTGACTTACATCATTGAGAAT 200001 Query 6427 CCTGTGAGTGTTCTGTCCTCCAAATGGAGGAGACCGAACCACATGTTCCATCCGTATGAA 6486 || || || || ||||| || ||| | | | |||||| ||| |||| | || Sbjct 200000 CCGGTTAGCGTCCTGTCATCAGCCTGGCGAAAGGCTGACCACACTTTCAATCCCTGGGAG 199941 Query 6487 TATGGGGGTTATCTACCCCATGATGATGTTCATCCGTTCTTCCCTGAGTATATTAATCCG 6546 ||||| || ||||| || | |||| | || || | ||||| ||||||| ||| Sbjct 199940 TATGGCGGCTATCTTCCTGAGAATGACGCACACCCCTGGTTCCCGATGTATATTGCGCCG 199881 Query 6547 CGAGACTCATACCCTAAAAAGACGTGTCTTTGGACGGGTAATGGTTTTAAAATGCCACCC 6606 || || | ||||| || || || ||||||||||| | | ||| |||||| Sbjct 199880 CGCGATGCTTACCCGAAGAAAACTTGTCTTTGGACTTCGGACGACTTTGTCATGCCAGAA 199821 Query 6607 GCAAAGCCCGTTGCGGTAGC--GAAGGGTTACTCAGAACAGCATAAAAAGCTGGGAGGAA 6664 ||||| || | || || |||| |||| | |||||| || |||||||| || | Sbjct 199820 AGGAAGCCTGTAAACCT-GCATGACGGGT-ACTCTGCACAGCAAAACAAGCTGGGCGGCA 199763 Query 6665 AGTCTGCCAAAACAAAACTGATACGTTCTTTAACACCCCGTGGTTTT 6711 ||||||||||||| || ||||||||||| ||| | || ||||| ||| Sbjct 199762 AGTCTGCCAAAACGAAGCTGATACGTTCCTTATCTCCTCGTGGATTT 199716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466944063753280