Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_016656.1
Length=45890
Score E
Sequences producing significant alignments: (Bits) Value
seq222 93.3 1e-14
seq435 84.2 6e-12
>seq222
Length=596275
Score = 93.3 bits (102), Expect = 1e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 26453 AATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGG 26512
||| | || || || ||||||||||| ||| | || || ||||| || |||| || ||
Sbjct 106793 AATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGT 106852
Query 26513 TACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTC 26572
|| ||||| |||| || ||||| ||||| ||||| ||||| | |||||| | || |||
Sbjct 106853 TATTTTGGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTC 106912
Query 26573 TTTCTTGCTACTTG 26586
|| || ||| ||||
Sbjct 106913 TTCCTAGCTTCTTG 106926
Score = 93.3 bits (102), Expect = 1e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 26453 AATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGG 26512
||| | || || || ||||||||||| ||| | || || ||||| || |||| || ||
Sbjct 179818 AATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGT 179759
Query 26513 TACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTC 26572
|| ||||| |||| || ||||| ||||| ||||| ||||| | |||||| | || |||
Sbjct 179758 TATTTTGGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTC 179699
Query 26573 TTTCTTGCTACTTG 26586
|| || ||| ||||
Sbjct 179698 TTCCTAGCTTCTTG 179685
>seq435
Length=389137
Score = 84.2 bits (92), Expect = 6e-12
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 26453 AATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGG 26512
||| | || || || || |||||||| ||||| | || |||| || |||| || ||
Sbjct 3072 AATGAAGGTTACAAATTCGGGCAAGAGGAAGAAATCTACTATATCGTAGCTGTTCATGGT 3131
Query 26513 TACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTC 26572
|| ||||| |||||||||||| ||||| ||||| ||||| | |||||| | | |||
Sbjct 3132 TATTTTGGCTTATTAATTTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTAGACTTC 3191
Query 26573 TTTCTTGCTACTTG 26586
|| || ||| ||||
Sbjct 3192 TTCCTAGCTTCTTG 3205
Score = 84.2 bits (92), Expect = 6e-12
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 26453 AATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGG 26512
||| | || || || || |||||||| ||||| | || |||| || |||| || ||
Sbjct 109267 AATGAAGGTTACAAATTCGGGCAAGAGGAAGAAATCTACTATATCGTAGCTGTTCATGGT 109208
Query 26513 TACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTC 26572
|| ||||| |||||||||||| ||||| ||||| ||||| | |||||| | | |||
Sbjct 109207 TATTTTGGCTTATTAATTTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTAGACTTC 109148
Query 26573 TTTCTTGCTACTTG 26586
|| || ||| ||||
Sbjct 109147 TTCCTAGCTTCTTG 109134
Score = 84.2 bits (92), Expect = 6e-12
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 26453 AATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGG 26512
||| | || || || || |||||||| ||||| | || |||| || |||| || ||
Sbjct 171437 AATGAAGGTTACAAATTCGGGCAAGAGGAAGAAATCTACTATATCGTAGCTGTTCATGGT 171496
Query 26513 TACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTC 26572
|| ||||| |||||||||||| ||||| ||||| ||||| | |||||| | | |||
Sbjct 171497 TATTTTGGCTTATTAATTTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTAGACTTC 171556
Query 26573 TTTCTTGCTACTTG 26586
|| || ||| ||||
Sbjct 171557 TTCCTAGCTTCTTG 171570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146722598135568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |