Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq222 93.3 1e-14 seq435 84.2 6e-12 >seq222 Length=596275 Score = 93.3 bits (102), Expect = 1e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 26453 AATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGG 26512 ||| | || || || ||||||||||| ||| | || || ||||| || |||| || || Sbjct 106793 AATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGT 106852 Query 26513 TACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTC 26572 || ||||| |||| || ||||| ||||| ||||| ||||| | |||||| | || ||| Sbjct 106853 TATTTTGGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTC 106912 Query 26573 TTTCTTGCTACTTG 26586 || || ||| |||| Sbjct 106913 TTCCTAGCTTCTTG 106926 Score = 93.3 bits (102), Expect = 1e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 26453 AATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGG 26512 ||| | || || || ||||||||||| ||| | || || ||||| || |||| || || Sbjct 179818 AATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGT 179759 Query 26513 TACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTC 26572 || ||||| |||| || ||||| ||||| ||||| ||||| | |||||| | || ||| Sbjct 179758 TATTTTGGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTC 179699 Query 26573 TTTCTTGCTACTTG 26586 || || ||| |||| Sbjct 179698 TTCCTAGCTTCTTG 179685 >seq435 Length=389137 Score = 84.2 bits (92), Expect = 6e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 26453 AATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGG 26512 ||| | || || || || |||||||| ||||| | || |||| || |||| || || Sbjct 3072 AATGAAGGTTACAAATTCGGGCAAGAGGAAGAAATCTACTATATCGTAGCTGTTCATGGT 3131 Query 26513 TACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTC 26572 || ||||| |||||||||||| ||||| ||||| ||||| | |||||| | | ||| Sbjct 3132 TATTTTGGCTTATTAATTTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTAGACTTC 3191 Query 26573 TTTCTTGCTACTTG 26586 || || ||| |||| Sbjct 3192 TTCCTAGCTTCTTG 3205 Score = 84.2 bits (92), Expect = 6e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 26453 AATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGG 26512 ||| | || || || || |||||||| ||||| | || |||| || |||| || || Sbjct 109267 AATGAAGGTTACAAATTCGGGCAAGAGGAAGAAATCTACTATATCGTAGCTGTTCATGGT 109208 Query 26513 TACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTC 26572 || ||||| |||||||||||| ||||| ||||| ||||| | |||||| | | ||| Sbjct 109207 TATTTTGGCTTATTAATTTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTAGACTTC 109148 Query 26573 TTTCTTGCTACTTG 26586 || || ||| |||| Sbjct 109147 TTCCTAGCTTCTTG 109134 Score = 84.2 bits (92), Expect = 6e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 26453 AATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGG 26512 ||| | || || || || |||||||| ||||| | || |||| || |||| || || Sbjct 171437 AATGAAGGTTACAAATTCGGGCAAGAGGAAGAAATCTACTATATCGTAGCTGTTCATGGT 171496 Query 26513 TACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTC 26572 || ||||| |||||||||||| ||||| ||||| ||||| | |||||| | | ||| Sbjct 171497 TATTTTGGCTTATTAATTTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTAGACTTC 171556 Query 26573 TTTCTTGCTACTTG 26586 || || ||| |||| Sbjct 171557 TTCCTAGCTTCTTG 171570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146722598135568