Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq435 82.4 2e-11 >seq435 Length=389137 Score = 82.4 bits (90), Expect = 2e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 5393 CAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATG 5452 |||| ||| |||||||| | |||| ||| | ||| || || |||||||| || || || Sbjct 3205 CAAGAAGCTAGGAAGAAGTCTAAAGAACGACAATTATTGAAACTAGCATATTGAAAAATT 3146 Query 5453 AGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAAT 5512 | | ||||| || |||||| | || || || | || ||||||||||||| |||||| Sbjct 3145 AATAAGCCAAAATAACCATGAACAGCTACGATATAGTAGATTTCTTCCTCTTGCCCGAAT 3086 Query 5513 TTATATCC 5520 || || || Sbjct 3085 TTGTAACC 3078 Score = 82.4 bits (90), Expect = 2e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 5393 CAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATG 5452 |||| ||| |||||||| | |||| ||| | ||| || || |||||||| || || || Sbjct 109134 CAAGAAGCTAGGAAGAAGTCTAAAGAACGACAATTATTGAAACTAGCATATTGAAAAATT 109193 Query 5453 AGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAAT 5512 | | ||||| || |||||| | || || || | || ||||||||||||| |||||| Sbjct 109194 AATAAGCCAAAATAACCATGAACAGCTACGATATAGTAGATTTCTTCCTCTTGCCCGAAT 109253 Query 5513 TTATATCC 5520 || || || Sbjct 109254 TTGTAACC 109261 Score = 82.4 bits (90), Expect = 2e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 5393 CAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATG 5452 |||| ||| |||||||| | |||| ||| | ||| || || |||||||| || || || Sbjct 171570 CAAGAAGCTAGGAAGAAGTCTAAAGAACGACAATTATTGAAACTAGCATATTGAAAAATT 171511 Query 5453 AGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAAT 5512 | | ||||| || |||||| | || || || | || ||||||||||||| |||||| Sbjct 171510 AATAAGCCAAAATAACCATGAACAGCTACGATATAGTAGATTTCTTCCTCTTGCCCGAAT 171451 Query 5513 TTATATCC 5520 || || || Sbjct 171450 TTGTAACC 171443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152645644658052