Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_016658.1
Length=47741
Score E
Sequences producing significant alignments: (Bits) Value
seq435 82.4 2e-11
>seq435
Length=389137
Score = 82.4 bits (90), Expect = 2e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 5393 CAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATG 5452
|||| ||| |||||||| | |||| ||| | ||| || || |||||||| || || ||
Sbjct 3205 CAAGAAGCTAGGAAGAAGTCTAAAGAACGACAATTATTGAAACTAGCATATTGAAAAATT 3146
Query 5453 AGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAAT 5512
| | ||||| || |||||| | || || || | || ||||||||||||| ||||||
Sbjct 3145 AATAAGCCAAAATAACCATGAACAGCTACGATATAGTAGATTTCTTCCTCTTGCCCGAAT 3086
Query 5513 TTATATCC 5520
|| || ||
Sbjct 3085 TTGTAACC 3078
Score = 82.4 bits (90), Expect = 2e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 5393 CAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATG 5452
|||| ||| |||||||| | |||| ||| | ||| || || |||||||| || || ||
Sbjct 109134 CAAGAAGCTAGGAAGAAGTCTAAAGAACGACAATTATTGAAACTAGCATATTGAAAAATT 109193
Query 5453 AGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAAT 5512
| | ||||| || |||||| | || || || | || ||||||||||||| ||||||
Sbjct 109194 AATAAGCCAAAATAACCATGAACAGCTACGATATAGTAGATTTCTTCCTCTTGCCCGAAT 109253
Query 5513 TTATATCC 5520
|| || ||
Sbjct 109254 TTGTAACC 109261
Score = 82.4 bits (90), Expect = 2e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 5393 CAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATG 5452
|||| ||| |||||||| | |||| ||| | ||| || || |||||||| || || ||
Sbjct 171570 CAAGAAGCTAGGAAGAAGTCTAAAGAACGACAATTATTGAAACTAGCATATTGAAAAATT 171511
Query 5453 AGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAAT 5512
| | ||||| || |||||| | || || || | || ||||||||||||| ||||||
Sbjct 171510 AATAAGCCAAAATAACCATGAACAGCTACGATATAGTAGATTTCTTCCTCTTGCCCGAAT 171451
Query 5513 TTATATCC 5520
|| || ||
Sbjct 171450 TTGTAACC 171443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152645644658052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |