Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq41 93.3 5e-14 seq157 84.2 2e-11 seq1136 82.4 9e-11 >seq41 Length=1285553 Score = 93.3 bits (102), Expect = 5e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 164054 GAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTGT 164113 ||||| ||||||||| ||||| || || || |||||| |||| | ||||| || Sbjct 342933 GAGGACGTATACATTCTCGACGCGGCGGAGGAGGCAGGAATTGACCTGCCCTACTCCTGC 342992 Query 164114 CGTGCTGGTGCTTGCTCCTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGT 164173 | || || |||||||||| || || || || |||| ||| | ||| |||||| Sbjct 342993 AGGGCAGGGTCTTGCTCCTCGTGCGCCGGCAAGGTTGTGAGTGGGAGTGTGGATCAGTCG 343052 Query 164174 GATCAGTCATTCCTAGACGATGATCAGATTGCAGCAGGATTCGTGCTTACGTGTGTAGCA 164233 || ||| || || || ||||||||||||| | ||||| ||||| || || || || Sbjct 343053 GACCAGAGCTTTCTGGATGATGATCAGATTGGCGGTGGATTTGTGCTGACCTGCGTGGCT 343112 Query 164234 TATCCAACATCTGA 164247 ||||| | ||||| Sbjct 343113 TATCCGTCGTCTGA 343126 >seq157 Length=750868 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 165053 TCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTT 165112 |||||| |||||||| || | || ||||| || ||||| || ||| ||||| | || Sbjct 399152 TCAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTT 399211 Query 165113 GTTCCTTC-AAGGATTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGTGTTGCAG 165171 || ||| |||| || || || || || | ||| | || ||||||||||| |||| | Sbjct 399212 TTTTTTTCCAAGGGTTTCATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTTG 399271 Query 165172 GTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGTTGAAAATACATTAT 165231 | | ||| | || || ||| ||||||||||| | || || ||| |||| |||| Sbjct 399272 AAGTGTAGGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACTTTAT 399331 Query 165232 ACGAGGATGGAGAGCAGGCAAATACCTT 165259 || ||| | || |||||||| || Sbjct 399332 TTGAAGATAGTGATGGTGCAAATACATT 399359 >seq1136 Length=104545 Score = 82.4 bits (90), Expect = 9e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 164063 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTGTCGTGCTGGT 164122 |||||||| ||||| || || || || || |||| | ||||| || | || || Sbjct 34013 TACATTCTCGACGCGGCGGAGGAGGCCGGGATTGACCTGCCCTACTCCTGCAGGGCAGGG 34072 Query 164123 GCTTGCTCCTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCA 164182 |||||||||| || || || ||| | || ||| ||| |||||| || ||| Sbjct 34073 TCTTGCTCCTCGTGCGCCGGCAAAGTCGTGAGTGGGGGTGTGGATCAGTCGGACCAGAGC 34132 Query 164183 TTCCTAGACGATGATCAGATTGCAGCAGGATTCGTGCTTACGTGTGTAGCATATCCAACA 164242 || || || ||||| ||||||| | ||||||||||| || ||||| || ||||| | Sbjct 34133 TTTCTGGATGATGAGCAGATTGATGGTGGATTCGTGCTCACTTGTGTGGCTTATCCGTCG 34192 Query 164243 TCTGA 164247 ||||| Sbjct 34193 TCTGA 34197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563194238458160