Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1330 212 1e-49 seq801 212 1e-49 seq202 187 5e-42 >seq1330 Length=73179 Score = 212 bits (234), Expect = 1e-49 Identities = 570/861 (66%), Gaps = 18/861 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| || || || || | |||||||||||||| |||||||||| || ||| ||| Sbjct 27051 CTGATACTCGCCGACGCGCTTCTCAAAGAAGTTGGTCTTCCCCTGCAGGCTGATCAGCTC 26992 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGG-CCCATCTGTTCCAGCA 47957 ||| | ||| ||||| | || |||| | |||| |||| | |||||| Sbjct 26991 CATCCAATCGAACGGGTTCTGGACATTGTACATCT-TGTCGTATCCCAACGAGCCCAGCA 26933 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | ||||||| ||| |||||||||| | ||| || | |||||| || | || | Sbjct 26932 GCCGATCCGCCACGAACTCGATGTACGTGCCCATCAGATCGCCGTTCATCCCCACCAGCG 26873 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 |||||| || || | | |||||| |||| |||| ||| || | || || ||| Sbjct 26872 CACACGG-CAGCGCGTCGCACACGAACTCCCTCTCGATCTCCACCGCGTTCCGTACGATC 26814 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 |||||| || ||| | | || || | ||| | | ||| |||| || || Sbjct 26813 GACTTAACCCGATCCTCGCTGAGCTTCTTCCTCAGCAGT---GAATACAGCAAACACGCG 26757 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| | ||||||||| ||||| || ||| ||| |||||||||| || || ||| Sbjct 26756 AAGTCGCAGTGCAAGCCCTCGTCTCGCGAGATCAGCTCGTTGGAGAAAGTCAGTCCCGGC 26697 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 || | || | || ||| ||||| || || || |||| || |||||||| || ||| Sbjct 26696 ATTAAACCGCGCTTTTTAAGCCAAAATATCGCGCAGAAACTCCCCGAGAAGAAAATCCCC 26637 Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316 ||||| || || || || | ||| ||||||| || ||| |||||| Sbjct 26636 TCCACGCAGGCAAAGGCCACGATTCGCTCCGCGAAAGACTCGGAGCCGTC---GATCCAT 26580 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376 || ||||| | ||||||||| || ||| || || || || || || ||||||| Sbjct 26579 CTCAGGGCCCACTGGGCCTTCTTCGCGACGCAGGGGATGGTGTCGATCGCGTGGAAGAGG 26520 Query 48377 ---TTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 | ||| ||| | | |||| | || || ||| || ||||||||| Sbjct 26519 CGGTGCTT---CTCGTCGGAGTCCTTGATGTACGTCTCGAGAAGGAGGCTGTACATCTCG 26463 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||||||||||||||||| | |||||| ||||| Sbjct 26462 GAGTGGATGTTCTCAATGGCGATCTGGAACCCGTAGAAGGCGCGGGCCTCGGCGACCTGG 26403 Query 48494 ACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 || || | || ||| ||||| ||||| ||| ||| || ||||| || ||||| || Sbjct 26402 ACCTCCTTCATAAACCTC-CCAGCGAGATTTTCAAGGACGATGCCATCGGAGGCAGCGAA 26344 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTG 48612 |||||| || | || | ||| || | |||| || || || || | |||| | Sbjct 26343 GAAGGCGAGAATGTGCGAGACGAAGTGCCTCTCGCCGTCGGATAGGGCTTCCCAGTGGCG 26284 Query 48613 TACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672 | ||| | || ||||| || || || | ||||||||||| || || || ||||| Sbjct 26283 GATGTCCTGGCATAGGTCGACCTCCTCGGCGGTCCAGAAGGATGCCTCGGCCTTCTTGTA 26224 Query 48673 CATGCCCCATATGTCCGGATA 48693 ||| ||||||| ||||| || Sbjct 26223 CATTTCCCATATTTCCGGGTA 26203 Score = 212 bits (234), Expect = 1e-49 Identities = 570/861 (66%), Gaps = 18/861 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| || || || || | |||||||||||||| |||||||||| || ||| ||| Sbjct 46129 CTGATACTCGCCGACGCGCTTCTCAAAGAAGTTGGTCTTCCCCTGCAGGCTGATCAGCTC 46188 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGG-CCCATCTGTTCCAGCA 47957 ||| | ||| ||||| | || |||| | |||| |||| | |||||| Sbjct 46189 CATCCAATCGAACGGGTTCTGGACATTGTACATCT-TGTCGTATCCCAACGAGCCCAGCA 46247 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | ||||||| ||| |||||||||| | ||| || | |||||| || | || | Sbjct 46248 GCCGATCCGCCACGAACTCGATGTACGTGCCCATCAGATCGCCGTTCATCCCCACCAGCG 46307 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 |||||| || || | | |||||| |||| |||| ||| || | || || ||| Sbjct 46308 CACACGG-CAGCGCGTCGCACACGAACTCCCTCTCGATCTCCACCGCGTTCCGTACGATC 46366 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 |||||| || ||| | | || || | ||| | | ||| |||| || || Sbjct 46367 GACTTAACCCGATCCTCGCTGAGCTTCTTCCTCAGCAGT---GAATACAGCAAACACGCG 46423 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| | ||||||||| ||||| || ||| ||| |||||||||| || || ||| Sbjct 46424 AAGTCGCAGTGCAAGCCCTCGTCTCGCGAGATCAGCTCGTTGGAGAAAGTCAGTCCCGGC 46483 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 || | || | || ||| ||||| || || || |||| || |||||||| || ||| Sbjct 46484 ATTAAACCGCGCTTTTTAAGCCAAAATATCGCGCAGAAACTCCCCGAGAAGAAAATCCCC 46543 Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316 ||||| || || || || | ||| ||||||| || ||| |||||| Sbjct 46544 TCCACGCAGGCAAAGGCCACGATTCGCTCCGCGAAAGACTCGGAGCCGTC---GATCCAT 46600 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376 || ||||| | ||||||||| || ||| || || || || || || ||||||| Sbjct 46601 CTCAGGGCCCACTGGGCCTTCTTCGCGACGCAGGGGATGGTGTCGATCGCGTGGAAGAGG 46660 Query 48377 ---TTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 | ||| ||| | | |||| | || || ||| || ||||||||| Sbjct 46661 CGGTGCTT---CTCGTCGGAGTCCTTGATGTACGTCTCGAGAAGGAGGCTGTACATCTCG 46717 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||||||||||||||||| | |||||| ||||| Sbjct 46718 GAGTGGATGTTCTCAATGGCGATCTGGAACCCGTAGAAGGCGCGGGCCTCGGCGACCTGG 46777 Query 48494 ACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 || || | || ||| ||||| ||||| ||| ||| || ||||| || ||||| || Sbjct 46778 ACCTCCTTCATAAACCTC-CCAGCGAGATTTTCAAGGACGATGCCATCGGAGGCAGCGAA 46836 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTG 48612 |||||| || | || | ||| || | |||| || || || || | |||| | Sbjct 46837 GAAGGCGAGAATGTGCGAGACGAAGTGCCTCTCGCCGTCGGATAGGGCTTCCCAGTGGCG 46896 Query 48613 TACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672 | ||| | || ||||| || || || | ||||||||||| || || || ||||| Sbjct 46897 GATGTCCTGGCATAGGTCGACCTCCTCGGCGGTCCAGAAGGATGCCTCGGCCTTCTTGTA 46956 Query 48673 CATGCCCCATATGTCCGGATA 48693 ||| ||||||| ||||| || Sbjct 46957 CATTTCCCATATTTCCGGGTA 46977 >seq801 Length=188201 Score = 212 bits (234), Expect = 1e-49 Identities = 570/861 (66%), Gaps = 18/861 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| || || || || | |||||||||||||| |||||||||| || ||| ||| Sbjct 12052 CTGATACTCGCCGACGCGCTTCTCAAAGAAGTTGGTCTTCCCCTGCAGGCTGATCAGCTC 11993 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGG-CCCATCTGTTCCAGCA 47957 ||| | ||| ||||| | || |||| | |||| |||| | |||||| Sbjct 11992 CATCCAATCGAACGGGTTCTGGACATTGTACATCT-TGTCGTATCCCAACGAGCCCAGCA 11934 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | ||||||| ||| |||||||||| | ||| || | |||||| || | || | Sbjct 11933 GCCGATCCGCCACGAACTCGATGTACGTGCCCATCAGATCGCCGTTCATCCCCACCAGCG 11874 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 |||||| || || | | |||||| |||| |||| ||| || | || || ||| Sbjct 11873 CACACGG-CAGCGCGTCGCACACGAACTCCCTCTCGATCTCCACCGCGTTCCGTACGATC 11815 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 |||||| || ||| | | || || | ||| | | ||| |||| || || Sbjct 11814 GACTTAACCCGATCCTCGCTGAGCTTCTTCCTCAGCAGT---GAATACAGCAAACACGCG 11758 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| | ||||||||| ||||| || ||| ||| |||||||||| || || ||| Sbjct 11757 AAGTCGCAGTGCAAGCCCTCGTCTCGCGAGATCAGCTCGTTGGAGAAAGTCAGTCCCGGC 11698 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 || | || | || ||| ||||| || || || |||| || |||||||| || ||| Sbjct 11697 ATTAAACCGCGCTTTTTAAGCCAAAATATCGCGCAGAAACTCCCCGAGAAGAAAATCCCC 11638 Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316 ||||| || || || || | ||| ||||||| || ||| |||||| Sbjct 11637 TCCACGCAGGCAAAGGCCACGATTCGCTCCGCGAAAGACTCGGAGCCGTC---GATCCAT 11581 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376 || ||||| | ||||||||| || ||| || || || || || || ||||||| Sbjct 11580 CTCAGGGCCCACTGGGCCTTCTTCGCGACGCAGGGGATGGTGTCGATCGCGTGGAAGAGG 11521 Query 48377 ---TTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 | ||| ||| | | |||| | || || ||| || ||||||||| Sbjct 11520 CGGTGCTT---CTCGTCGGAGTCCTTGATGTACGTCTCGAGAAGGAGGCTGTACATCTCG 11464 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||||||||||||||||| | |||||| ||||| Sbjct 11463 GAGTGGATGTTCTCAATGGCGATCTGGAACCCGTAGAAGGCGCGGGCCTCGGCGACCTGG 11404 Query 48494 ACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 || || | || ||| ||||| ||||| ||| ||| || ||||| || ||||| || Sbjct 11403 ACCTCCTTCATAAACCTC-CCAGCGAGATTTTCAAGGACGATGCCATCGGAGGCAGCGAA 11345 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTG 48612 |||||| || | || | ||| || | |||| || || || || | |||| | Sbjct 11344 GAAGGCGAGAATGTGCGAGACGAAGTGCCTCTCGCCGTCGGATAGGGCTTCCCAGTGGCG 11285 Query 48613 TACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672 | ||| | || ||||| || || || | ||||||||||| || || || ||||| Sbjct 11284 GATGTCCTGGCATAGGTCGACCTCCTCGGCGGTCCAGAAGGATGCCTCGGCCTTCTTGTA 11225 Query 48673 CATGCCCCATATGTCCGGATA 48693 ||| ||||||| ||||| || Sbjct 11224 CATTTCCCATATTTCCGGGTA 11204 >seq202 Length=624202 Score = 187 bits (206), Expect = 5e-42 Identities = 565/864 (65%), Gaps = 24/864 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| || || || || | |||||||||||||| |||||||||| || ||| ||| Sbjct 31086 CTGATACTCGCCGACGCGCTTCTCAAAGAAGTTGGTCTTCCCCTGCAGGCTGATCAGCTC 31145 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTCAGGCCCATCTGTTCCA 47954 ||| || ||||||||| | || |||| | ||| || ||| | ||| Sbjct 31146 CATCCAGTCGAAGGGGTTCTGGACATTGTACATCTTGCCGTATC----CCAACGAGCCCA 31201 Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014 |||| ||||||| ||| |||||||||| | ||| || | |||||| || | | Sbjct 31202 GCAGCCGATCCGCCACGAACTCGATGTACGTGCCCATCAGATCGCCGTTCATCCCCACCA 31261 Query 48015 GGG-ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 | | |||||| || || | | ||||| |||| |||| ||| || | || || Sbjct 31262 GCGCACACGG-CAGCGCGTCGCACACGAACTCTCTCTCGATCTCCACCGCGTTCCGTACG 31320 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 ||| | | || || ||| | || || | ||| | | ||| |||| || Sbjct 31321 ATCGACATCACCCGATCCTCGCTCAGCTTCTTCCTCAGCAGT---GAATACAGCAAACAC 31377 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| | ||||||||| ||||| || ||| ||| |||||||||| || || Sbjct 31378 GCGAAGTCGCAGTGCAAGCCCTCGTCTCGCGAGATCAGCTCGTTGGAGAAAGTCAGTCCC 31437 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || ||| ||||| || || || |||| || |||||||| || Sbjct 31438 GGCATTAAACCGCGCTTTTTAAGCCAAAATATCGCGCAGAAACTCCCCGAGAAGAAAATC 31497 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 |||||||| || || || || | ||| ||||||| || ||| |||| Sbjct 31498 CCCTCCACGCAGGCAAAGGCTACGATTCGCTCCGCGAAAGACTCGGAGCCGTC---GATC 31554 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || || ||||| | ||||||||| || ||| || || || || || || ||||| Sbjct 31555 CATCTCAGGGCCCACTGGGCCTTCTTCGCGACGCAAGGGATGGTGTCGATCGCGTGGAAG 31614 Query 48374 AGC---TTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 || | ||| ||| | | |||| | || || ||| || ||||||| Sbjct 31615 AGGCGGTGCTT---CTCGTCGGAGTCCTTGATGTACGTCTCGAGAAGGAGGCTGTACATC 31671 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 || ||||| | ||||| || ||||||||||||||||||||||| | |||||| ||| Sbjct 31672 TCGGAGTGGATGTTCTCAATGGCGATCTGGAACCCGTAGAAGGCGCGGGCCTCGGCGACC 31731 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGC 48549 || || || | || ||| ||||| ||||| ||| ||| || || || || ||||| Sbjct 31732 TGGACCTCCTTCATAAACCTC-CCAGCGAGATTTTCAAGGACAATGCCGTCGGAGGCAGC 31790 Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCC 48609 |||||||| || | || | ||| || | |||| || || || || | ||| Sbjct 31791 GAAGAAGGCGAGAATGTGCGAGACGAAGTGCCTCTCGCCGTCGGATAGGGCTTCCCACTG 31850 Query 48610 CTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTT 48669 | | ||| | || ||||| || || || | ||||||||||| || || || || Sbjct 31851 GCGGATGTCCTGGCATAGGTCGACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTCTT 31910 Query 48670 GTACATGCCCCATATGTCCGGATA 48693 |||||| ||||||| || || || Sbjct 31911 GTACATTTCCCATATTTCTGGGTA 31934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931507392442880