Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq157 91.5 2e-13 >seq157 Length=750868 Score = 91.5 bits (100), Expect = 2e-13 Identities = 153/218 (70%), Gaps = 5/218 (2%) Strand=Plus/Plus Query 10262 CAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTCCT-TCT 10320 ||||||||||||||||||| ||| | ||| || || || || || || | ||| | | | Sbjct 399153 CAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTTT 399212 Query 10321 CTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTTGCTG- 10379 || |||| || ||||||||||| || | || | || |||||||||||||||| || Sbjct 399213 TTTTTTCCAAGGGTTTCATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTTGA 399272 Query 10380 -GTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACACACTT 10438 || || ||| | || || ||| || || || || | ||||||||| | || | Sbjct 399273 AGTGTA--GGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACTTTA 399330 Query 10439 TATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTT 10476 | | ||||| | || ||||| || ||| | ||||| Sbjct 399331 TTTGAAGATAGTGATGGTGCAAATACATTCCATGCTTT 399368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516465913008000