Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_019724.1
Length=43741
Score E
Sequences producing significant alignments: (Bits) Value
seq768 123 7e-24
>seq768
Length=200800
Score = 123 bits (136), Expect = 7e-24
Identities = 255/372 (69%), Gaps = 8/372 (2%)
Strand=Plus/Plus
Query 26408 ACAGGTTTCTTCTCGGGCATACGGAAGCCGTTTCCAGTCCATAAGCAGGTCAGCTTCGGA 26467
||||| ||| | || ||||| ||| ||| |||||| | || || ||||||
Sbjct 199810 ACAGGCTTCCTTTCTGGCATGACAAAGTCGTCCGAAGTCCAAAGACAAGTTTTCTTCGGG 199869
Query 26468 TATGAATCGCG-GGCGTTGATGTATTCAGGGAAGAGCGGGTGTACGTCATCCTCTGGCAG 26526
|| | |||||| |||| || || ||||| |||||| |||||| ||| || ||
Sbjct 199870 TAAGCATCGCGCGGCGCA-ATATACATCGGGAACCAGGGGTGTGCGTCATTCTCAGGAAG 199928
Query 26527 ATATCCGCCATACTCCCACGGGTCAAACGAGTGGTCCGGCTTACGCCACTGGGTG--GAA 26584
||| |||||||||||||| || | || | |||||| | ||| ||||| || || ||
Sbjct 199929 ATAGCCGCCATACTCCCAGGGATTGAAAGTGTGGTCAGCCTTTCGCCA--GGCTGATGAC 199986
Query 26585 AGCACGCTGCGCGGATTCTCAATCATATATGGCACTTCGAAGAAATCACCCAGGTAAGCT 26644
|| ||||| |||||||||||| || || | ||| | | | |||||| | || ||
Sbjct 199987 AGGACGCTAACCGGATTCTCAATGATGTAAGTCACACCCAGGCTATCACCGATGTTCGCG 200046
Query 26645 GCGATCTTCGCGGTGCGCACCGCCTTAAGCTGGAAGGCAGGGTCGCGGGCGCGTTTGCGC 26704
|| ||| |||||| || || || |||||| || || || || ||||
Sbjct 200047 GCAATCCGGGCGGTGGCAACAGCTTTCTCCTGGAATAGCGGATCACGTTTACGCTTGC-T 200105
Query 26705 GGGAAAG-CTGGCGCACCGCTAACCGCCAGATCCGTACACGGAGGGAATGCGTAAATGAT 26763
|| |||| | | ||||| ||||| ||||| || || ||||| ||||| || |||||
Sbjct 200106 GGCAAAGTGTCGAGCACCACTAACGGCCAGGTCAGTGCACGGCGGGAAGGCCATAATGAA 200165
Query 26764 ATCCGGCGTGCC 26775
||||||| ||||
Sbjct 200166 ATCCGGCTTGCC 200177
Score = 102 bits (112), Expect = 2e-17
Identities = 249/371 (67%), Gaps = 6/371 (2%)
Strand=Plus/Plus
Query 26408 ACAGGTTTCTTCTCGGGCATACGGAAGCCGTTTCCAGTCCATAAGCAGGTCAGCTTCGGA 26467
|||||||| |||||||||| || ||| ||||| | || || ||||||
Sbjct 48809 ACAGGTTTTCTCTCGGGCATGACAAAATCGTCAGAGGTCCACAGACAAGTTTTCTTCGGG 48868
Query 26468 TATGAATCGCG-GGCGTTGATGTATTCAGGGAAGAGCGGGTGTACGTCATCCTCTGGCAG 26526
|| | |||||| |||| || || ||||| ||||| |||||||||| || ||
Sbjct 48869 TAAGCATCGCGCGGCGCA-ATATACATCGGGAACCAGGGGTGCGCGTCATCCTCAGGAAG 48927
Query 26527 ATATCCGCCATACTCCCACGGGTCAAACGAGTGGTCCGGCTTACGCCACTGGGTGGAAAG 26586
||| ||||| |||||||| || | || ||||| | || || | |||| | || ||
Sbjct 48928 ATAGCCGCCGTACTCCCAGGGATTGAAGGAGTGATTTGGTTTTCTCCACGCAGACGACAG 48987
Query 26587 CACGCTGCGCGGATTCTCAATCATATATGGCACTTCGAAGAAATCACCCAGGTAAGCTGC 26646
||||| |||||||||||| || || | ||| | | ||||| | || || ||
Sbjct 48988 GACGCTCACCGGATTCTCAATGATGTAAGTCACACCAAGCTCCTCACCAATGTTCGCAGC 49047
Query 26647 GATCTTCGCGGTGCGCACCGCCTTAAGCTGGAAGGCAGGGTCGCGGGCGCGTTTGCGCGG 26706
||| |||||| || ||||| |||||| || || || | || || | ||
Sbjct 49048 TATCCGAGCGGTGGCAACAGCCTTCTCCTGGAATAACGGATCACGTTCACGCTTAC-TGG 49106
Query 26707 GAAAGCTG--GCGCACCGCTAACCGCCAGATCCGTACACGGAGGGAATGCGTAAATGATA 26764
|||| || | ||||| ||||| ||||| || || || |||||||| || ||| | |
Sbjct 49107 CAAAG-TGACGAGCACCACTAACAGCCAGGTCAGTGCATGGAGGGAAAGCCATAATAAAA 49165
Query 26765 TCCGGCGTGCC 26775
|||||| ||||
Sbjct 49166 TCCGGCTTGCC 49176
Score = 102 bits (112), Expect = 2e-17
Identities = 249/371 (67%), Gaps = 6/371 (2%)
Strand=Plus/Plus
Query 26408 ACAGGTTTCTTCTCGGGCATACGGAAGCCGTTTCCAGTCCATAAGCAGGTCAGCTTCGGA 26467
|||||||| |||||||||| || ||| ||||| | || || ||||||
Sbjct 99145 ACAGGTTTTCTCTCGGGCATGACAAAATCGTCAGAGGTCCACAGACAAGTTTTCTTCGGG 99204
Query 26468 TATGAATCGCG-GGCGTTGATGTATTCAGGGAAGAGCGGGTGTACGTCATCCTCTGGCAG 26526
|| | |||||| |||| || || ||||| ||||| |||||||||| || ||
Sbjct 99205 TAAGCATCGCGCGGCGCA-ATATACATCGGGAACCAGGGGTGCGCGTCATCCTCAGGAAG 99263
Query 26527 ATATCCGCCATACTCCCACGGGTCAAACGAGTGGTCCGGCTTACGCCACTGGGTGGAAAG 26586
||| ||||| |||||||| || | || ||||| | || || | |||| | || ||
Sbjct 99264 ATAGCCGCCGTACTCCCAGGGATTGAAGGAGTGATTTGGTTTTCTCCACGCAGACGACAG 99323
Query 26587 CACGCTGCGCGGATTCTCAATCATATATGGCACTTCGAAGAAATCACCCAGGTAAGCTGC 26646
||||| |||||||||||| || || | ||| | | ||||| | || || ||
Sbjct 99324 GACGCTCACCGGATTCTCAATGATGTAAGTCACACCAAGCTCCTCACCAATGTTCGCAGC 99383
Query 26647 GATCTTCGCGGTGCGCACCGCCTTAAGCTGGAAGGCAGGGTCGCGGGCGCGTTTGCGCGG 26706
||| |||||| || ||||| |||||| || || || | || || | ||
Sbjct 99384 TATCCGAGCGGTGGCAACAGCCTTCTCCTGGAATAACGGATCACGTTCACGCTTAC-TGG 99442
Query 26707 GAAAGCTG--GCGCACCGCTAACCGCCAGATCCGTACACGGAGGGAATGCGTAAATGATA 26764
|||| || | ||||| ||||| ||||| || || || |||||||| || ||| | |
Sbjct 99443 CAAAG-TGACGAGCACCACTAACAGCCAGGTCAGTGCATGGAGGGAAAGCCATAATAAAA 99501
Query 26765 TCCGGCGTGCC 26775
|||||| ||||
Sbjct 99502 TCCGGCTTGCC 99512
Score = 84.2 bits (92), Expect = 6e-12
Identities = 118/163 (72%), Gaps = 2/163 (1%)
Strand=Plus/Minus
Query 38755 ATGAAAACCGAAATGGTTGATAAGCACGAAATCAAGATCGGAGATACGGTAGTCCACAAC 38814
|||||||| || | || |||| |||||||||||||| ||||| || | ||||||
Sbjct 199421 ATGAAAACGAAATTAGTGCATAAATCAGAAATCAAGATCGGCGATACTGTGATTCACAAC 199362
Query 38815 GGGGAGCTTCGCACTGTGTGCAAGCGAG-CGTTTAGCATCGATGAATTTATGGGCCTGCT 38873
|| || ||| ||||| | ||| ||| || | | || ||||||||||||||| ||| |
Sbjct 199361 GGAGAACTTAAAACTGTTGGTAAG-GAGTCGATAACCAACGATGAATTTATGGGTCTGTT 199303
Query 38874 ACTTTGGGGCGACAGCTACCGTTTAGGGTATAAACTGGTTGAG 38916
| | |||||| || || | || |||||| ||||||||
Sbjct 199302 GTTGTTCGGCGACTCATATCGCCTGGGTTATAAAATGGTTGAG 199260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139845976322052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |