Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq157 98.7 1e-15 seq146 86.0 8e-12 >seq157 Length=750868 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 9/220 (4%) Strand=Plus/Minus Query 102061 AATGCTTTGAAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACA 102120 || || | ||| || ||||| ||||| ||||||| | | ||| | || ||||| || Sbjct 399368 AAAGCATGGAATGTATTTGCACCATCACTATCTTCAAATAAAGTATCTTCTACAGTAGCA 399309 Query 102121 CCGTGGATTGCTGACAGCAGTGCTCCTCCCAGGATAC-CTGCAACA---CCCATCATATG 102176 || || || || | | ||| || | ||| ||| || ||||| ||||||||||| Sbjct 399308 CCATGAATAGCGCATAACAGAGCAACGCCC----TACACTTCAACAACTCCCATCATATG 399253 Query 102177 GAATGGGTTGAGCGTCCAGTTATGGAAGCCCTGTAGGAAGAGT-AGGAATCTAAATATCG 102235 |||| ||| | || || ||||| || || || | || | | ||||| |||||| | Sbjct 399252 AAATGAGTTCAATGTTCAATTATGAAACCCTTGGAAAAAAAAAGATGAATCAAAATATAG 399193 Query 102236 CTGCAACACCAAACGAGGGCGCAAAGAACCAACTGGACTG 102275 |||| |||||||| |||| ||||||||||||| ||||| Sbjct 399192 CTGCTACACCAAAATTGGGCACAAAGAACCAACTAGACTG 399153 >seq146 Length=786261 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/139 (74%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 102585 GGTATACCAGGAAGTAGCAAACGTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGC 102644 ||||||||| ||||| |||| || || || || | ||| ||||| | |||| ||| || Sbjct 94732 GGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATATGC 94791 Query 102645 AGTGGGAAAAAGAAGTAGTCCAGACCAACCC-ACAAAGACAAAGCGATCTCGTTTAATCC 102703 | ||||| || | ||| |||||||||||| ||||| || ||||| || | | || Sbjct 94792 ACAAGGAAAGAGTAATAGGCCAGACCAACCCTACAAAAACGAAGCGGTCCCTCCGTAACC 94851 Query 102704 AGTCATCCAGGATGTCAAA 102722 ||||||||| || ||||| Sbjct 94852 AGTCATCCATAATATCAAA 94870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633496320916560