Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq222 100 8e-17 >seq222 Length=596275 Score = 100 bits (110), Expect = 8e-17 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 21674 AGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTGGAAGATAAGCCG 21733 ||| || ||||| || | | ||| ||||||| || ||||||||||| ||||| | | Sbjct 106921 AGCTAGGAAGAAGTGTAAAGAACGACAATTATTGAAACTAGCATATTGAAAGATCAATCA 106862 Query 21734 ACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTTGACCAAACTTGTA 21793 |||||||| || ||| |||| || |||||||| || | ||||||||| ||||| ||||| Sbjct 106861 GCCAAAATAACCATGAACAGCTACGATATTGTAGGTTTTTTCCTCTTGCCCAAATTTGTA 106802 Query 21794 ACC 21796 ||| Sbjct 106801 ACC 106799 Score = 100 bits (110), Expect = 8e-17 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 21674 AGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTGGAAGATAAGCCG 21733 ||| || ||||| || | | ||| ||||||| || ||||||||||| ||||| | | Sbjct 179690 AGCTAGGAAGAAGTGTAAAGAACGACAATTATTGAAACTAGCATATTGAAAGATCAATCA 179749 Query 21734 ACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTTGACCAAACTTGTA 21793 |||||||| || ||| |||| || |||||||| || | ||||||||| ||||| ||||| Sbjct 179750 GCCAAAATAACCATGAACAGCTACGATATTGTAGGTTTTTTCCTCTTGCCCAAATTTGTA 179809 Query 21794 ACC 21796 ||| Sbjct 179810 ACC 179812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146204211567960