Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_020855.1
Length=192497
Score E
Sequences producing significant alignments: (Bits) Value
seq222 86.0 8e-12
>seq222
Length=596275
Score = 86.0 bits (94), Expect = 8e-12
Identities = 117/161 (73%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 8094 AGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAACGATGCATACTGGAAGATTAATC 8152
||| ||||||||||| | | | || || || |||| | ||||| || ||||| ||||
Sbjct 106921 AGCTAGGAAGAAGTGTAAAGAACGACAATTATTGAAACTA-GCATATTGAAAGATCAATC 106863
Query 8153 TACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTCTTCTTCTTGACCAAACTTAT 8212
||||| || |||||| |||| || ||||| ||||| | ||| ||||| ||||| || |
Sbjct 106862 AGCCAAAATAACCATGAACAGCTACGATATTGTAGGTTTTTTCCTCTTGCCCAAATTTGT 106803
Query 8213 AACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGATT 8253
|||| | || ||| || | ||| || || || | ||||
Sbjct 106802 AACCTTCATTGGTAGATTCATTTTCTGTGGTTTCCCAGATT 106762
Score = 86.0 bits (94), Expect = 8e-12
Identities = 117/161 (73%), Gaps = 2/161 (1%)
Strand=Plus/Plus
Query 8094 AGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAACGATGCATACTGGAAGATTAATC 8152
||| ||||||||||| | | | || || || |||| | ||||| || ||||| ||||
Sbjct 179690 AGCTAGGAAGAAGTGTAAAGAACGACAATTATTGAAACTA-GCATATTGAAAGATCAATC 179748
Query 8153 TACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTCTTCTTCTTGACCAAACTTAT 8212
||||| || |||||| |||| || ||||| ||||| | ||| ||||| ||||| || |
Sbjct 179749 AGCCAAAATAACCATGAACAGCTACGATATTGTAGGTTTTTTCCTCTTGCCCAAATTTGT 179808
Query 8213 AACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGATT 8253
|||| | || ||| || | ||| || || || | ||||
Sbjct 179809 AACCTTCATTGGTAGATTCATTTTCTGTGGTTTCCCAGATT 179849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615845602353040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |