Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq222 93.3 1e-14 seq435 84.2 6e-12 >seq222 Length=596275 Score = 93.3 bits (102), Expect = 1e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 26075 CAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAACTCGCATACTGAAAAATT 26134 |||| ||| || ||||| || | |||||| | ||||| ||||| ||||| ||||| || Sbjct 106926 CAAGAAGCTAGGAAGAAGTGTAAAGAACGACAATTATTGAAACTAGCATATTGAAAGATC 106867 Query 26135 AATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTCTCTTCATCTTGCCCAAAC 26194 |||| ||||| || || || |||| || ||||| || || | ||| ||||||||||| Sbjct 106866 AATCAGCCAAAATAACCATGAACAGCTACGATATTGTAGGTTTTTTCCTCTTGCCCAAAT 106807 Query 26195 TTATAGCCATAATT 26208 || || || | ||| Sbjct 106806 TTGTAACCTTCATT 106793 Score = 93.3 bits (102), Expect = 1e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 26075 CAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAACTCGCATACTGAAAAATT 26134 |||| ||| || ||||| || | |||||| | ||||| ||||| ||||| ||||| || Sbjct 179685 CAAGAAGCTAGGAAGAAGTGTAAAGAACGACAATTATTGAAACTAGCATATTGAAAGATC 179744 Query 26135 AATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTCTCTTCATCTTGCCCAAAC 26194 |||| ||||| || || || |||| || ||||| || || | ||| ||||||||||| Sbjct 179745 AATCAGCCAAAATAACCATGAACAGCTACGATATTGTAGGTTTTTTCCTCTTGCCCAAAT 179804 Query 26195 TTATAGCCATAATT 26208 || || || | ||| Sbjct 179805 TTGTAACCTTCATT 179818 >seq435 Length=389137 Score = 84.2 bits (92), Expect = 6e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 26075 CAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAACTCGCATACTGAAAAATT 26134 |||| ||| || ||||| | | |||||| | ||||| ||||| ||||| ||||||||| Sbjct 3205 CAAGAAGCTAGGAAGAAGTCTAAAGAACGACAATTATTGAAACTAGCATATTGAAAAATT 3146 Query 26135 AATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTCTCTTCATCTTGCCCAAAC 26194 ||| ||||| || || || |||| || |||| || | ||||| |||||||| || Sbjct 3145 AATAAGCCAAAATAACCATGAACAGCTACGATATAGTAGATTTCTTCCTCTTGCCCGAAT 3086 Query 26195 TTATAGCCATAATT 26208 || || || | ||| Sbjct 3085 TTGTAACCTTCATT 3072 Score = 84.2 bits (92), Expect = 6e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 26075 CAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAACTCGCATACTGAAAAATT 26134 |||| ||| || ||||| | | |||||| | ||||| ||||| ||||| ||||||||| Sbjct 109134 CAAGAAGCTAGGAAGAAGTCTAAAGAACGACAATTATTGAAACTAGCATATTGAAAAATT 109193 Query 26135 AATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTCTCTTCATCTTGCCCAAAC 26194 ||| ||||| || || || |||| || |||| || | ||||| |||||||| || Sbjct 109194 AATAAGCCAAAATAACCATGAACAGCTACGATATAGTAGATTTCTTCCTCTTGCCCGAAT 109253 Query 26195 TTATAGCCATAATT 26208 || || || | ||| Sbjct 109254 TTGTAACCTTCATT 109267 Score = 84.2 bits (92), Expect = 6e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 26075 CAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAACTCGCATACTGAAAAATT 26134 |||| ||| || ||||| | | |||||| | ||||| ||||| ||||| ||||||||| Sbjct 171570 CAAGAAGCTAGGAAGAAGTCTAAAGAACGACAATTATTGAAACTAGCATATTGAAAAATT 171511 Query 26135 AATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTCTCTTCATCTTGCCCAAAC 26194 ||| ||||| || || || |||| || |||| || | ||||| |||||||| || Sbjct 171510 AATAAGCCAAAATAACCATGAACAGCTACGATATAGTAGATTTCTTCCTCTTGCCCGAAT 171451 Query 26195 TTATAGCCATAATT 26208 || || || | ||| Sbjct 171450 TTGTAACCTTCATT 171437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147708172597440