Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq15 107 4e-18
seq615 96.9 7e-15
seq687 95.1 2e-14
seq59 95.1 2e-14
>seq15
Length=1624393
Score = 107 bits (118), Expect = 4e-18
Identities = 163/231 (71%), Gaps = 1/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| || || || | || || || ||||| | ||| || ||| || |||||
Sbjct 1057610 ATACCACCCCTCAGTCGAAGAACCAAGTGCAAAGTTGACTCCTTTTGGATGTTGTAATCC 1057669
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATC-AGG 192425
| | || | |||| |||||||| ||||||||||| ||||||||||| || || ||
Sbjct 1057670 GCAAGAGTCCTGCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGG 1057729
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| ||||| || |||||||| || || || || ||| || | ||| || |||
Sbjct 1057730 GGGGATTCCCTCCTTATCTTGGATCTTTGCCTTGACGTTATCGATCGTATCAGAACTTTC 1057789
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | |||||| || || || || | ||||| | ||| ||||||||
Sbjct 1057790 GACCTCCAAAGTAATTGTCTTCCCGGTCAGGGTTTTGACAAAGATCTGCAT 1057840
Score = 107 bits (118), Expect = 4e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378
||||| | || | ||| | |||| ||| || ||| |||||||| | | ||| ||
Sbjct 1074614 AGACGAAGGACGAGATGGAGGGTAGACTCCTTCTGGATGTTATAATCTGCAAGTGTGCGA 1074673
Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438
|||| || | ||||| ||||||||||| | ||||| || || ||||| || |||||
Sbjct 1074674 CCATCCTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATCCCTTCC 1074733
Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498
||||| || || ||| ||| ||||| |||| || || || || || || |||
Sbjct 1074734 TTATCCTGGATCTTAGCTTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTCCAGGGTA 1074793
Query 192499 ATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| ||||| ||||||| || || | ||||||||||||
Sbjct 1074794 ATTGTTTTCCCAGTTAGGGTCTTCACGAATATCTGCATT 1074832
Score = 100 bits (110), Expect = 6e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| ||||| | || | || || || | || | |||||| |||||||||||
Sbjct 1075286 ATACCTCCTCTTAATCGCAGAACCAAGTGGAGGGTCGACTCTTTCTGAATATTATAATCG 1075345
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| |||| ||||| || || || |||||||| | ||||| || || ||
Sbjct 1075346 GCTAGGGTTCGGCCATCCTCCAACTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCCGGG 1075405
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || |||||||| || || || || || |||| || || ||
Sbjct 1075406 GGAATTCCCTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATAGTGTCCGAGCTCTCG 1075465
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| |||||||| || || || |||| ||||| | || ||||||||
Sbjct 1075466 ACTTCCAGAGTAATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 1075515
Score = 87.8 bits (96), Expect = 4e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378
||||| | || | ||| | |||| |||||| || || ||||| | | || ||
Sbjct 1057166 AGACGAAGAACGAGATGGAGGGTAGACTCTTTCTGAATGTTGTAATCCGCAAGGGTACGA 1057225
Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438
|||| || | ||||| ||||| ||||| || ||||| || |||||||| || || ||
Sbjct 1057226 CCATCCTCTAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGTGGGATCCCCTCC 1057285
Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498
|| || || || ||| ||| ||||| |||| || || || || || |||||
Sbjct 1057286 TTGTCCTGAATCTTAGCTTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTCGAGAGTG 1057345
Query 192499 ATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || || | ||| || | ||||||||||||
Sbjct 1057346 ATCGTCTTCCCTGTCAGTGTCTTCACAAATATCTGCAT 1057383
>seq615
Length=266788
Score = 96.9 bits (106), Expect = 7e-15
Identities = 77/93 (83%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| |||||||| | | ||||| |||| |||||||| ||||||||||| || |||||
Sbjct 187791 GATGTTATAATCTGCAAGAGTTCGGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCT 187850
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446
|||||||||||| || || ||||||||||| ||
Sbjct 187851 CTGTTGATCAGGAGGGATGCCTTCTTTATCCTG 187883
>seq687
Length=229775
Score = 95.1 bits (104), Expect = 2e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|| ||||| | ||||| | || || || | ||| | ||| ||| || || || || ||
Sbjct 53801 ATCCCACCACGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGA-ATGTTGTAGTC 53743
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|| | ||| | | |||| || | || || || |||||||| || || ||||| || ||
Sbjct 53742 AGCAAGTGTCCTTCCATCCTCGAGCTGCTTGCCCGCAAAGATCAACCTTTGTTGGTCTGG 53683
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || || || || || || ||||| || |||||| || | ||| || |||
Sbjct 53682 GGGAATGCCCTCCTTGTCCTGGATTTTGGCCTTCACATTATCAATTGTATCAGAACTTTC 53623
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || ||||||||||| ||||| || || || | ||| || |||||
Sbjct 53622 AACTTCCAGGGTAATGGTTTTCCCAGTCAAGGTCTTCACAAAGATTTGCAT 53572
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || || | |||| ||| || ||| || || |||
Sbjct 53345 ATACCACCACGAAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCA 53286
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || || | || || | || || ||||||||||| | ||||| || || |||
Sbjct 53285 GCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGT 53226
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| || || || |||||| || | || || ||
Sbjct 53225 GGGATACCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTGTCAGAGCTCTCA 53166
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | ||| |||||||| || || | || |||| |||||| |||||
Sbjct 53165 ACCTCCAAAGTGATGGTTTTTCCGGTGAGGGTCTTAACAAATATTTGCAT 53116
>seq59
Length=1152742
Score = 95.1 bits (104), Expect = 2e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|| ||||| | ||||| | || || || | ||| | ||| ||| || || || || ||
Sbjct 731282 ATCCCACCACGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGA-ATGTTGTAGTC 731224
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|| | ||| | | |||| || | || || || |||||||| || || ||||| || ||
Sbjct 731223 AGCAAGTGTCCTTCCATCCTCGAGCTGCTTGCCCGCAAAGATCAACCTTTGTTGGTCTGG 731164
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || || || || || || ||||| || |||||| || | ||| || |||
Sbjct 731163 GGGAATGCCCTCCTTGTCCTGGATTTTGGCCTTCACATTATCAATTGTATCAGAACTTTC 731104
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || ||||||||||| ||||| || || || | ||| || |||||
Sbjct 731103 AACTTCCAGGGTAATGGTTTTCCCAGTCAAGGTCTTCACAAAGATTTGCAT 731053
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || || | |||| ||| || ||| || || |||
Sbjct 730826 ATACCACCACGAAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCA 730767
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || || | || || | || || ||||||||||| | ||||| || || |||
Sbjct 730766 GCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGT 730707
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| || || || |||||| || | || || ||
Sbjct 730706 GGGATACCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTGTCAGAGCTCTCA 730647
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | ||| |||||||| || || | || |||| |||||| |||||
Sbjct 730646 ACCTCCAAAGTGATGGTTTTTCCGGTGAGGGTCTTAACAAATATTTGCAT 730597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984452477015700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |