Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_021331.1
Length=51821
Score E
Sequences producing significant alignments: (Bits) Value
seq768 630 2e-176
seq2064 102 3e-17
>seq768
Length=200800
Score = 630 bits (698), Expect = 2e-176
Identities = 437/492 (89%), Gaps = 5/492 (1%)
Strand=Plus/Minus
Query 17693 GACCGGAAATAGCACTTTTTGTTAAAACGCCA--GGTGCAAAACCTGGCATAATAACCTC 17750
|| || |||||||||||||||||||||| | | ||||| | ||||||||| |||||
Sbjct 199707 GATCGCAAATAGCACTTTTTGTTAAAACTCGATCGGTGCGATT--TGGCATAATTACCTC 199650
Query 17751 ATCGAAACGAGATTGAGGAAAA-CAAAATGGCACGTCGCATCACCAAAGACCTTAAAGTC 17809
|||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||
Sbjct 199649 ATCGAAACGAGATTGAGGAAAAACAAAATGGCACGTCGCATCACTAAATACCTTAAAGTT 199590
Query 17810 CTGAACAAAGAAAACGTAGTTAAAATCCTGGTTATCTGGGGATACAACGAAGAAACAGCA 17869
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 199589 CTGAACAAAGAAAACGTAGTTAAAATCCTGGTTATTTGGGGATACAACGAAGAATCAGCA 199530
Query 17870 AAGCAGAAGGTAGAGGCAGGTTATGACATGGCTGTAAAAGCAATGCCAAACGACGACGCC 17929
||||||||||||||||| ||||||||| ||||||| || || ||||| |||||||| ||
Sbjct 199529 AAGCAGAAGGTAGAGGCTGGTTATGACCTGGCTGTCAAGGCGATGCCTAACGACGATGCA 199470
Query 17930 AAAGGTATTGCAAACTATGTAGCTTTCTTTTAATTAGCAGGTGAGTAAATGAAAACGAAA 17989
||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||
Sbjct 199469 AAAGGTATTGCAAACTATGTAGCGTTCTTTTAATTAACAGGCTAACAAATGAAAACGAAA 199410
Query 17990 TTAGTCCATAAATCAGAAATCAAGATCGGCGATACTGTGATTCACAACGGTGAGCTTAGA 18049
||||| |||||||||||||||||||||||||||||||||||||||||||| || |||| |
Sbjct 199409 TTAGTGCATAAATCAGAAATCAAGATCGGCGATACTGTGATTCACAACGGAGAACTTAAA 199350
Query 18050 ACGGTTGGCAAAGAGTCAATAAGCCACGATGAATTTATGGGGATCTTGTTGTTCGGTGAC 18109
|| ||||| || ||||| |||| | |||||||||||||||| | ||||||||||| |||
Sbjct 199349 ACTGTTGGTAAGGAGTCGATAACCAACGATGAATTTATGGGTCTGTTGTTGTTCGGCGAC 199290
Query 18110 TCTTATCGTCTTGGTTACAAGATGGTTGAGCTTGTGGAAGAGGTAAAATTCTAAATAGCA 18169
|| ||||| || ||||| || |||||||||||||| || || ||||||||||||||||||
Sbjct 199289 TCATATCGCCTGGGTTATAAAATGGTTGAGCTTGTTGAGGAAGTAAAATTCTAAATAGCA 199230
Query 18170 CTTTTTGTTAAA 18181
||||||| ||||
Sbjct 199229 CTTTTTGCTAAA 199218
Score = 590 bits (654), Expect = 2e-164
Identities = 422/484 (87%), Gaps = 1/484 (0%)
Strand=Plus/Minus
Query 17699 AAATAGCACTTTTTGTTAAAACGCCAGGTGCAAAACCTGGCATAATAACCTCATCGAAAC 17758
|||||||| ||||||||||||| | | || | || |||||| |||||||||||||
Sbjct 48700 AAATAGCATTTTTTGTTAAAACTCGATCGGCGTGATTTGACATAATTACCTCATCGAAAC 48641
Query 17759 GAGATTGAGGAAAA-CAAAATGGCACGTCGCATCACCAAAGACCTTAAAGTCCTGAACAA 17817
|||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 48640 GAGATTGAGGAAAAACAAAATGGCACGTCGCATCACTAAAGACCTTAAAGTTCTGAACAA 48581
Query 17818 AGAAAACGTAGTTAAAATCCTGGTTATCTGGGGATACAACGAAGAAACAGCAAAGCAGAA 17877
||||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||
Sbjct 48580 AGAAAACGTAGTTAAGATCCCGGTTATTTGGGGATACAACGAAGAGTCAGCAAAGCAGAA 48521
Query 17878 GGTAGAGGCAGGTTATGACATGGCTGTAAAAGCAATGCCAAACGACGACGCCAAAGGTAT 17937
||| |||| ||||||||| ||||| | || |||||||| ||||||||||| ||||||||
Sbjct 48520 GGTCGAGGATGGTTATGACCTGGCTATCAAGGCAATGCCTAACGACGACGCTAAAGGTAT 48461
Query 17938 TGCAAACTATGTAGCTTTCTTTTAATTAGCAGGTGAGTAAATGAAAACGAAATTAGTCCA 17997
||||||||| ||| ||||||| |||||| |||| || ||||||||||||||||||| ||
Sbjct 48460 TGCAAACTACGTATCTTTCTTCTAATTAACAGGCAAGAAAATGAAAACGAAATTAGTGCA 48401
Query 17998 TAAATCAGAAATCAAGATCGGCGATACTGTGATTCACAACGGTGAGCTTAGAACGGTTGG 18057
||||||||| ||||||||||||||||| | ||||||||||| ||||||| ||| |||||
Sbjct 48400 TAAATCAGAGATCAAGATCGGCGATACCATCATTCACAACGGAGAGCTTAAAACTGTTGG 48341
Query 18058 CAAAGAGTCAATAAGCCACGATGAATTTATGGGGATCTTGTTGTTCGGTGACTCTTATCG 18117
||| || |||||||| |||||||||||||| | ||||| ||||| ||||| |||||
Sbjct 48340 CAAGGATTCAATAAGTAGAGATGAATTTATGGGTCTGTTGTTTTTCGGGGACTCCTATCG 48281
Query 18118 TCTTGGTTACAAGATGGTTGAGCTTGTGGAAGAGGTAAAATTCTAAATAGCACTTTTTGT 18177
||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||
Sbjct 48280 ACTTGGTTACAAAATGGTTGAGCTTGTTGAGGATGTAAAATTCTAAATAGCACTTTTTGT 48221
Query 18178 TAAA 18181
||||
Sbjct 48220 TAAA 48217
Score = 590 bits (654), Expect = 2e-164
Identities = 422/484 (87%), Gaps = 1/484 (0%)
Strand=Plus/Minus
Query 17699 AAATAGCACTTTTTGTTAAAACGCCAGGTGCAAAACCTGGCATAATAACCTCATCGAAAC 17758
|||||||| ||||||||||||| | | || | || |||||| |||||||||||||
Sbjct 99036 AAATAGCATTTTTTGTTAAAACTCGATCGGCGTGATTTGACATAATTACCTCATCGAAAC 98977
Query 17759 GAGATTGAGGAAAA-CAAAATGGCACGTCGCATCACCAAAGACCTTAAAGTCCTGAACAA 17817
|||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 98976 GAGATTGAGGAAAAACAAAATGGCACGTCGCATCACTAAAGACCTTAAAGTTCTGAACAA 98917
Query 17818 AGAAAACGTAGTTAAAATCCTGGTTATCTGGGGATACAACGAAGAAACAGCAAAGCAGAA 17877
||||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||
Sbjct 98916 AGAAAACGTAGTTAAGATCCCGGTTATTTGGGGATACAACGAAGAGTCAGCAAAGCAGAA 98857
Query 17878 GGTAGAGGCAGGTTATGACATGGCTGTAAAAGCAATGCCAAACGACGACGCCAAAGGTAT 17937
||| |||| ||||||||| ||||| | || |||||||| ||||||||||| ||||||||
Sbjct 98856 GGTCGAGGATGGTTATGACCTGGCTATCAAGGCAATGCCTAACGACGACGCTAAAGGTAT 98797
Query 17938 TGCAAACTATGTAGCTTTCTTTTAATTAGCAGGTGAGTAAATGAAAACGAAATTAGTCCA 17997
||||||||| ||| ||||||| |||||| |||| || ||||||||||||||||||| ||
Sbjct 98796 TGCAAACTACGTATCTTTCTTCTAATTAACAGGCAAGAAAATGAAAACGAAATTAGTGCA 98737
Query 17998 TAAATCAGAAATCAAGATCGGCGATACTGTGATTCACAACGGTGAGCTTAGAACGGTTGG 18057
||||||||| ||||||||||||||||| | ||||||||||| ||||||| ||| |||||
Sbjct 98736 TAAATCAGAGATCAAGATCGGCGATACCATCATTCACAACGGAGAGCTTAAAACTGTTGG 98677
Query 18058 CAAAGAGTCAATAAGCCACGATGAATTTATGGGGATCTTGTTGTTCGGTGACTCTTATCG 18117
||| || |||||||| |||||||||||||| | ||||| ||||| ||||| |||||
Sbjct 98676 CAAGGATTCAATAAGTAGAGATGAATTTATGGGTCTGTTGTTTTTCGGGGACTCCTATCG 98617
Query 18118 TCTTGGTTACAAGATGGTTGAGCTTGTGGAAGAGGTAAAATTCTAAATAGCACTTTTTGT 18177
||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||
Sbjct 98616 ACTTGGTTACAAAATGGTTGAGCTTGTTGAGGATGTAAAATTCTAAATAGCACTTTTTGT 98557
Query 18178 TAAA 18181
||||
Sbjct 98556 TAAA 98553
Score = 111 bits (122), Expect = 5e-20
Identities = 230/337 (68%), Gaps = 9/337 (3%)
Strand=Plus/Plus
Query 13114 AGTCCAAAGGCATGTTTTCTTAAAGTACCGATCCCGCGCCGGAATA-ATATCAGGGAAGT 13172
||||||||| || |||||||| ||| ||| |||| || |||| | ||| |||||
Sbjct 199845 AGTCCAAAGACAAGTTTTCTTCGGGTAAGCATCGCGCGGCGCAATATACATC-GGGAACC 199903
Query 13173 CGGGATGCTTATCATCTTCCGGCAGATAGCAGC-ATAATCGCACGGATGGAACGTATAAT 13231
||| || |||| || || ||||||| || ||| || || |||| ||| || | |
Sbjct 199904 AGGGGTGTGCGTCATTCTCAGGAAGATAGCCGCCATACTCCCAGGGATTGAAAGTGTGGT 199963
Query 13232 CAGGCTTACGCCATAACGTTGACAGCTTGCCTACAGGATTTTCGATCATGTAAGGAACGC 13291
||| ||| ||||| | |||||| || || ||||| || || ||||||| || |
Sbjct 199964 CAGCCTTTCGCCAGGCTGATGACAGGACGCTAACCGGATTCTCAATGATGTAAGTCACAC 200023
Query 13292 CGAAATAATCAGCGATATGCGCCGCGATTCTGCAAGTGTCGGCGGCCTCATCCTGGAACG 13351
| | |||| |||| | ||| || || | | ||| | | || | ||||||||
Sbjct 200024 CCAGGCTATCACCGATGTTCGCGGCAATCCGGGCGGTGGCAACAGCTTTCTCCTGGAATA 200083
Query 13352 CTGGATTCTCAAGG---CGTTTTTTGGTCCAATGGCGAGATCCGCTATTTGCAAGGTCAG 13408
|||| || | || || ||| | || |||| || ||| || |||||||
Sbjct 200084 GCGGAT---CACGTTTACGCTTGCTGGCAAAGTGTCGAGCACCACTAACGGCCAGGTCAG 200140
Query 13409 TGCACGGCGGAAATGCCATAATGAAATCAGGCTTGCC 13445
|||||||||| || |||||||||||||| ||||||||
Sbjct 200141 TGCACGGCGGGAAGGCCATAATGAAATCCGGCTTGCC 200177
Score = 98.7 bits (108), Expect = 3e-16
Identities = 123/165 (75%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 14787 ACAACGTTCCATGTCAGGCCGGAGTGATACGCAACCATATCCTCAAGATCAATTGTGATG 14846
|| |||||||| || || || |||||||||||||||||||||||||| || || |||||
Sbjct 892 ACCACGTTCCAGGTAAGACCAGAGTGATACGCAACCATATCCTCAAGGTCGATCGTGATT 833
Query 14847 ATAGCGCCTTTCTTAAAGATTCCTTTCTCGTGAGTGGTGTCACGCTGTACAACTTTAACA 14906
| || ||||| || | || || || ||||| | ||| ||||| ||||| ||
Sbjct 832 TCGGTTCCCTTCTTGAATAGACCCTTTTCATGAGTTGAGTCGCGCTGAACAACCACTACG 773
Query 14907 TCAACTTGATTTTCCATTTTTAAATCCTC-GT-TCGTTGTCGATG 14949
|||| ||| ||||||| || ||||| || ||| ||||||||
Sbjct 772 TCAATTTGCGTTTCCATCTTCGTTTCCTCTGTATCG-TGTCGATG 729
Score = 98.7 bits (108), Expect = 3e-16
Identities = 123/165 (75%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 14787 ACAACGTTCCATGTCAGGCCGGAGTGATACGCAACCATATCCTCAAGATCAATTGTGATG 14846
|| |||||||| || || || |||||||||||||||||||||||||| || || |||||
Sbjct 51070 ACCACGTTCCAGGTAAGACCAGAGTGATACGCAACCATATCCTCAAGGTCGATCGTGATT 51011
Query 14847 ATAGCGCCTTTCTTAAAGATTCCTTTCTCGTGAGTGGTGTCACGCTGTACAACTTTAACA 14906
| || ||||| || | || || || ||||| | ||| ||||| ||||| ||
Sbjct 51010 TCGGTTCCCTTCTTGAATAGACCCTTTTCATGAGTTGAGTCGCGCTGAACAACCACTACG 50951
Query 14907 TCAACTTGATTTTCCATTTTTAAATCCTC-GT-TCGTTGTCGATG 14949
|||| ||| ||||||| || ||||| || ||| ||||||||
Sbjct 50950 TCAATTTGCGTTTCCATCTTCGTTTCCTCTGTATCG-TGTCGATG 50907
Score = 98.7 bits (108), Expect = 3e-16
Identities = 123/165 (75%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 14787 ACAACGTTCCATGTCAGGCCGGAGTGATACGCAACCATATCCTCAAGATCAATTGTGATG 14846
|| |||||||| || || || |||||||||||||||||||||||||| || || |||||
Sbjct 101458 ACCACGTTCCAGGTAAGACCAGAGTGATACGCAACCATATCCTCAAGGTCGATCGTGATT 101399
Query 14847 ATAGCGCCTTTCTTAAAGATTCCTTTCTCGTGAGTGGTGTCACGCTGTACAACTTTAACA 14906
| || ||||| || | || || || ||||| | ||| ||||| ||||| ||
Sbjct 101398 TCGGTTCCCTTCTTGAATAGACCCTTTTCATGAGTTGAGTCGCGCTGAACAACCACTACG 101339
Query 14907 TCAACTTGATTTTCCATTTTTAAATCCTC-GT-TCGTTGTCGATG 14949
|||| ||| ||||||| || ||||| || ||| ||||||||
Sbjct 101338 TCAATTTGCGTTTCCATCTTCGTTTCCTCTGTATCG-TGTCGATG 101295
Score = 98.7 bits (108), Expect = 3e-16
Identities = 123/165 (75%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 14787 ACAACGTTCCATGTCAGGCCGGAGTGATACGCAACCATATCCTCAAGATCAATTGTGATG 14846
|| |||||||| || || || |||||||||||||||||||||||||| || || |||||
Sbjct 151868 ACCACGTTCCAGGTAAGACCAGAGTGATACGCAACCATATCCTCAAGGTCGATCGTGATT 151809
Query 14847 ATAGCGCCTTTCTTAAAGATTCCTTTCTCGTGAGTGGTGTCACGCTGTACAACTTTAACA 14906
| || ||||| || | || || || ||||| | ||| ||||| ||||| ||
Sbjct 151808 TCGGTTCCCTTCTTGAATAGACCCTTTTCATGAGTTGAGTCGCGCTGAACAACCACTACG 151749
Query 14907 TCAACTTGATTTTCCATTTTTAAATCCTC-GT-TCGTTGTCGATG 14949
|||| ||| ||||||| || ||||| || ||| ||||||||
Sbjct 151748 TCAATTTGCGTTTCCATCTTCGTTTCCTCTGTATCG-TGTCGATG 151705
Score = 87.8 bits (96), Expect = 6e-13
Identities = 55/58 (95%), Gaps = 1/58 (2%)
Strand=Plus/Plus
Query 9529 TTCGTTTCGATGAAACAAATATACC-GATACGAGATCGGGAGTTTTAACAAAAAGTGC 9585
||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct 94216 TTCGTTTCGATGAAACAAATATACCCGATACGAGATCTGGTGTTTTAACAAAAAGTGC 94273
>seq2064
Length=2442
Score = 102 bits (112), Expect = 3e-17
Identities = 156/216 (72%), Gaps = 5/216 (2%)
Strand=Plus/Minus
Query 14787 ACAACGTTCCATGTCAGGCCGGAGTGATACGCAACCATATCCTCAAGATCAATTGTGATG 14846
|| |||||||| || ||||| |||||||| ||||||||||||||||| || || |||||
Sbjct 897 ACCACGTTCCAGGTGAGGCCCGAGTGATATGCAACCATATCCTCAAGGTCGATCGTGATT 838
Query 14847 ATAGCGCCTTTCTTAAAGATTCCTTTCTCGTGAGTGGTGTCACGCTGTACAACTTTAACA 14906
|| |||||||| || | || || || ||||| | || ||||| ||||| ||
Sbjct 837 TCAGTTCCTTTCTTGAAAAGACCATTTTCATGAGTTGAATCTCGCTGAACAACCACTACG 778
Query 14907 TCAACTTGATTTTCCATTTTTAAATCCTC-GT-TCGTTGTCGATGCGCTTAATATA-CCA 14963
|||| ||| ||||||| | ||||| || ||| |||||||| | ||| ||
Sbjct 777 TCAATTTGCGTTTCCATCTCCGTTTCCTCTGTGTCG-TGTCGATGAAAAGATAATACCCG 719
Query 14964 ATCAGAGGCGCATCGGTTTTAACAAAAAGTGCTATT 14999
||| | || || |||||||||||||||||||
Sbjct 718 ATCCG-CTCGACCGGGATTTAACAAAAAGTGCTATT 684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 165701306360772
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