Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_021331.1 Length=51821 Score E Sequences producing significant alignments: (Bits) Value seq768 630 2e-176 seq2064 102 3e-17 >seq768 Length=200800 Score = 630 bits (698), Expect = 2e-176 Identities = 437/492 (89%), Gaps = 5/492 (1%) Strand=Plus/Minus Query 17693 GACCGGAAATAGCACTTTTTGTTAAAACGCCA--GGTGCAAAACCTGGCATAATAACCTC 17750 || || |||||||||||||||||||||| | | ||||| | ||||||||| ||||| Sbjct 199707 GATCGCAAATAGCACTTTTTGTTAAAACTCGATCGGTGCGATT--TGGCATAATTACCTC 199650 Query 17751 ATCGAAACGAGATTGAGGAAAA-CAAAATGGCACGTCGCATCACCAAAGACCTTAAAGTC 17809 |||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||| Sbjct 199649 ATCGAAACGAGATTGAGGAAAAACAAAATGGCACGTCGCATCACTAAATACCTTAAAGTT 199590 Query 17810 CTGAACAAAGAAAACGTAGTTAAAATCCTGGTTATCTGGGGATACAACGAAGAAACAGCA 17869 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct 199589 CTGAACAAAGAAAACGTAGTTAAAATCCTGGTTATTTGGGGATACAACGAAGAATCAGCA 199530 Query 17870 AAGCAGAAGGTAGAGGCAGGTTATGACATGGCTGTAAAAGCAATGCCAAACGACGACGCC 17929 ||||||||||||||||| ||||||||| ||||||| || || ||||| |||||||| || Sbjct 199529 AAGCAGAAGGTAGAGGCTGGTTATGACCTGGCTGTCAAGGCGATGCCTAACGACGATGCA 199470 Query 17930 AAAGGTATTGCAAACTATGTAGCTTTCTTTTAATTAGCAGGTGAGTAAATGAAAACGAAA 17989 ||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||| Sbjct 199469 AAAGGTATTGCAAACTATGTAGCGTTCTTTTAATTAACAGGCTAACAAATGAAAACGAAA 199410 Query 17990 TTAGTCCATAAATCAGAAATCAAGATCGGCGATACTGTGATTCACAACGGTGAGCTTAGA 18049 ||||| |||||||||||||||||||||||||||||||||||||||||||| || |||| | Sbjct 199409 TTAGTGCATAAATCAGAAATCAAGATCGGCGATACTGTGATTCACAACGGAGAACTTAAA 199350 Query 18050 ACGGTTGGCAAAGAGTCAATAAGCCACGATGAATTTATGGGGATCTTGTTGTTCGGTGAC 18109 || ||||| || ||||| |||| | |||||||||||||||| | ||||||||||| ||| Sbjct 199349 ACTGTTGGTAAGGAGTCGATAACCAACGATGAATTTATGGGTCTGTTGTTGTTCGGCGAC 199290 Query 18110 TCTTATCGTCTTGGTTACAAGATGGTTGAGCTTGTGGAAGAGGTAAAATTCTAAATAGCA 18169 || ||||| || ||||| || |||||||||||||| || || |||||||||||||||||| Sbjct 199289 TCATATCGCCTGGGTTATAAAATGGTTGAGCTTGTTGAGGAAGTAAAATTCTAAATAGCA 199230 Query 18170 CTTTTTGTTAAA 18181 ||||||| |||| Sbjct 199229 CTTTTTGCTAAA 199218 Score = 590 bits (654), Expect = 2e-164 Identities = 422/484 (87%), Gaps = 1/484 (0%) Strand=Plus/Minus Query 17699 AAATAGCACTTTTTGTTAAAACGCCAGGTGCAAAACCTGGCATAATAACCTCATCGAAAC 17758 |||||||| ||||||||||||| | | || | || |||||| ||||||||||||| Sbjct 48700 AAATAGCATTTTTTGTTAAAACTCGATCGGCGTGATTTGACATAATTACCTCATCGAAAC 48641 Query 17759 GAGATTGAGGAAAA-CAAAATGGCACGTCGCATCACCAAAGACCTTAAAGTCCTGAACAA 17817 |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 48640 GAGATTGAGGAAAAACAAAATGGCACGTCGCATCACTAAAGACCTTAAAGTTCTGAACAA 48581 Query 17818 AGAAAACGTAGTTAAAATCCTGGTTATCTGGGGATACAACGAAGAAACAGCAAAGCAGAA 17877 ||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||| Sbjct 48580 AGAAAACGTAGTTAAGATCCCGGTTATTTGGGGATACAACGAAGAGTCAGCAAAGCAGAA 48521 Query 17878 GGTAGAGGCAGGTTATGACATGGCTGTAAAAGCAATGCCAAACGACGACGCCAAAGGTAT 17937 ||| |||| ||||||||| ||||| | || |||||||| ||||||||||| |||||||| Sbjct 48520 GGTCGAGGATGGTTATGACCTGGCTATCAAGGCAATGCCTAACGACGACGCTAAAGGTAT 48461 Query 17938 TGCAAACTATGTAGCTTTCTTTTAATTAGCAGGTGAGTAAATGAAAACGAAATTAGTCCA 17997 ||||||||| ||| ||||||| |||||| |||| || ||||||||||||||||||| || Sbjct 48460 TGCAAACTACGTATCTTTCTTCTAATTAACAGGCAAGAAAATGAAAACGAAATTAGTGCA 48401 Query 17998 TAAATCAGAAATCAAGATCGGCGATACTGTGATTCACAACGGTGAGCTTAGAACGGTTGG 18057 ||||||||| ||||||||||||||||| | ||||||||||| ||||||| ||| ||||| Sbjct 48400 TAAATCAGAGATCAAGATCGGCGATACCATCATTCACAACGGAGAGCTTAAAACTGTTGG 48341 Query 18058 CAAAGAGTCAATAAGCCACGATGAATTTATGGGGATCTTGTTGTTCGGTGACTCTTATCG 18117 ||| || |||||||| |||||||||||||| | ||||| ||||| ||||| ||||| Sbjct 48340 CAAGGATTCAATAAGTAGAGATGAATTTATGGGTCTGTTGTTTTTCGGGGACTCCTATCG 48281 Query 18118 TCTTGGTTACAAGATGGTTGAGCTTGTGGAAGAGGTAAAATTCTAAATAGCACTTTTTGT 18177 ||||||||||| |||||||||||||| || || |||||||||||||||||||||||||| Sbjct 48280 ACTTGGTTACAAAATGGTTGAGCTTGTTGAGGATGTAAAATTCTAAATAGCACTTTTTGT 48221 Query 18178 TAAA 18181 |||| Sbjct 48220 TAAA 48217 Score = 590 bits (654), Expect = 2e-164 Identities = 422/484 (87%), Gaps = 1/484 (0%) Strand=Plus/Minus Query 17699 AAATAGCACTTTTTGTTAAAACGCCAGGTGCAAAACCTGGCATAATAACCTCATCGAAAC 17758 |||||||| ||||||||||||| | | || | || |||||| ||||||||||||| Sbjct 99036 AAATAGCATTTTTTGTTAAAACTCGATCGGCGTGATTTGACATAATTACCTCATCGAAAC 98977 Query 17759 GAGATTGAGGAAAA-CAAAATGGCACGTCGCATCACCAAAGACCTTAAAGTCCTGAACAA 17817 |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 98976 GAGATTGAGGAAAAACAAAATGGCACGTCGCATCACTAAAGACCTTAAAGTTCTGAACAA 98917 Query 17818 AGAAAACGTAGTTAAAATCCTGGTTATCTGGGGATACAACGAAGAAACAGCAAAGCAGAA 17877 ||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||| Sbjct 98916 AGAAAACGTAGTTAAGATCCCGGTTATTTGGGGATACAACGAAGAGTCAGCAAAGCAGAA 98857 Query 17878 GGTAGAGGCAGGTTATGACATGGCTGTAAAAGCAATGCCAAACGACGACGCCAAAGGTAT 17937 ||| |||| ||||||||| ||||| | || |||||||| ||||||||||| |||||||| Sbjct 98856 GGTCGAGGATGGTTATGACCTGGCTATCAAGGCAATGCCTAACGACGACGCTAAAGGTAT 98797 Query 17938 TGCAAACTATGTAGCTTTCTTTTAATTAGCAGGTGAGTAAATGAAAACGAAATTAGTCCA 17997 ||||||||| ||| ||||||| |||||| |||| || ||||||||||||||||||| || Sbjct 98796 TGCAAACTACGTATCTTTCTTCTAATTAACAGGCAAGAAAATGAAAACGAAATTAGTGCA 98737 Query 17998 TAAATCAGAAATCAAGATCGGCGATACTGTGATTCACAACGGTGAGCTTAGAACGGTTGG 18057 ||||||||| ||||||||||||||||| | ||||||||||| ||||||| ||| ||||| Sbjct 98736 TAAATCAGAGATCAAGATCGGCGATACCATCATTCACAACGGAGAGCTTAAAACTGTTGG 98677 Query 18058 CAAAGAGTCAATAAGCCACGATGAATTTATGGGGATCTTGTTGTTCGGTGACTCTTATCG 18117 ||| || |||||||| |||||||||||||| | ||||| ||||| ||||| ||||| Sbjct 98676 CAAGGATTCAATAAGTAGAGATGAATTTATGGGTCTGTTGTTTTTCGGGGACTCCTATCG 98617 Query 18118 TCTTGGTTACAAGATGGTTGAGCTTGTGGAAGAGGTAAAATTCTAAATAGCACTTTTTGT 18177 ||||||||||| |||||||||||||| || || |||||||||||||||||||||||||| Sbjct 98616 ACTTGGTTACAAAATGGTTGAGCTTGTTGAGGATGTAAAATTCTAAATAGCACTTTTTGT 98557 Query 18178 TAAA 18181 |||| Sbjct 98556 TAAA 98553 Score = 111 bits (122), Expect = 5e-20 Identities = 230/337 (68%), Gaps = 9/337 (3%) Strand=Plus/Plus Query 13114 AGTCCAAAGGCATGTTTTCTTAAAGTACCGATCCCGCGCCGGAATA-ATATCAGGGAAGT 13172 ||||||||| || |||||||| ||| ||| |||| || |||| | ||| ||||| Sbjct 199845 AGTCCAAAGACAAGTTTTCTTCGGGTAAGCATCGCGCGGCGCAATATACATC-GGGAACC 199903 Query 13173 CGGGATGCTTATCATCTTCCGGCAGATAGCAGC-ATAATCGCACGGATGGAACGTATAAT 13231 ||| || |||| || || ||||||| || ||| || || |||| ||| || | | Sbjct 199904 AGGGGTGTGCGTCATTCTCAGGAAGATAGCCGCCATACTCCCAGGGATTGAAAGTGTGGT 199963 Query 13232 CAGGCTTACGCCATAACGTTGACAGCTTGCCTACAGGATTTTCGATCATGTAAGGAACGC 13291 ||| ||| ||||| | |||||| || || ||||| || || ||||||| || | Sbjct 199964 CAGCCTTTCGCCAGGCTGATGACAGGACGCTAACCGGATTCTCAATGATGTAAGTCACAC 200023 Query 13292 CGAAATAATCAGCGATATGCGCCGCGATTCTGCAAGTGTCGGCGGCCTCATCCTGGAACG 13351 | | |||| |||| | ||| || || | | ||| | | || | |||||||| Sbjct 200024 CCAGGCTATCACCGATGTTCGCGGCAATCCGGGCGGTGGCAACAGCTTTCTCCTGGAATA 200083 Query 13352 CTGGATTCTCAAGG---CGTTTTTTGGTCCAATGGCGAGATCCGCTATTTGCAAGGTCAG 13408 |||| || | || || ||| | || |||| || ||| || ||||||| Sbjct 200084 GCGGAT---CACGTTTACGCTTGCTGGCAAAGTGTCGAGCACCACTAACGGCCAGGTCAG 200140 Query 13409 TGCACGGCGGAAATGCCATAATGAAATCAGGCTTGCC 13445 |||||||||| || |||||||||||||| |||||||| Sbjct 200141 TGCACGGCGGGAAGGCCATAATGAAATCCGGCTTGCC 200177 Score = 98.7 bits (108), Expect = 3e-16 Identities = 123/165 (75%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 14787 ACAACGTTCCATGTCAGGCCGGAGTGATACGCAACCATATCCTCAAGATCAATTGTGATG 14846 || |||||||| || || || |||||||||||||||||||||||||| || || ||||| Sbjct 892 ACCACGTTCCAGGTAAGACCAGAGTGATACGCAACCATATCCTCAAGGTCGATCGTGATT 833 Query 14847 ATAGCGCCTTTCTTAAAGATTCCTTTCTCGTGAGTGGTGTCACGCTGTACAACTTTAACA 14906 | || ||||| || | || || || ||||| | ||| ||||| ||||| || Sbjct 832 TCGGTTCCCTTCTTGAATAGACCCTTTTCATGAGTTGAGTCGCGCTGAACAACCACTACG 773 Query 14907 TCAACTTGATTTTCCATTTTTAAATCCTC-GT-TCGTTGTCGATG 14949 |||| ||| ||||||| || ||||| || ||| |||||||| Sbjct 772 TCAATTTGCGTTTCCATCTTCGTTTCCTCTGTATCG-TGTCGATG 729 Score = 98.7 bits (108), Expect = 3e-16 Identities = 123/165 (75%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 14787 ACAACGTTCCATGTCAGGCCGGAGTGATACGCAACCATATCCTCAAGATCAATTGTGATG 14846 || |||||||| || || || |||||||||||||||||||||||||| || || ||||| Sbjct 51070 ACCACGTTCCAGGTAAGACCAGAGTGATACGCAACCATATCCTCAAGGTCGATCGTGATT 51011 Query 14847 ATAGCGCCTTTCTTAAAGATTCCTTTCTCGTGAGTGGTGTCACGCTGTACAACTTTAACA 14906 | || ||||| || | || || || ||||| | ||| ||||| ||||| || Sbjct 51010 TCGGTTCCCTTCTTGAATAGACCCTTTTCATGAGTTGAGTCGCGCTGAACAACCACTACG 50951 Query 14907 TCAACTTGATTTTCCATTTTTAAATCCTC-GT-TCGTTGTCGATG 14949 |||| ||| ||||||| || ||||| || ||| |||||||| Sbjct 50950 TCAATTTGCGTTTCCATCTTCGTTTCCTCTGTATCG-TGTCGATG 50907 Score = 98.7 bits (108), Expect = 3e-16 Identities = 123/165 (75%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 14787 ACAACGTTCCATGTCAGGCCGGAGTGATACGCAACCATATCCTCAAGATCAATTGTGATG 14846 || |||||||| || || || |||||||||||||||||||||||||| || || ||||| Sbjct 101458 ACCACGTTCCAGGTAAGACCAGAGTGATACGCAACCATATCCTCAAGGTCGATCGTGATT 101399 Query 14847 ATAGCGCCTTTCTTAAAGATTCCTTTCTCGTGAGTGGTGTCACGCTGTACAACTTTAACA 14906 | || ||||| || | || || || ||||| | ||| ||||| ||||| || Sbjct 101398 TCGGTTCCCTTCTTGAATAGACCCTTTTCATGAGTTGAGTCGCGCTGAACAACCACTACG 101339 Query 14907 TCAACTTGATTTTCCATTTTTAAATCCTC-GT-TCGTTGTCGATG 14949 |||| ||| ||||||| || ||||| || ||| |||||||| Sbjct 101338 TCAATTTGCGTTTCCATCTTCGTTTCCTCTGTATCG-TGTCGATG 101295 Score = 98.7 bits (108), Expect = 3e-16 Identities = 123/165 (75%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 14787 ACAACGTTCCATGTCAGGCCGGAGTGATACGCAACCATATCCTCAAGATCAATTGTGATG 14846 || |||||||| || || || |||||||||||||||||||||||||| || || ||||| Sbjct 151868 ACCACGTTCCAGGTAAGACCAGAGTGATACGCAACCATATCCTCAAGGTCGATCGTGATT 151809 Query 14847 ATAGCGCCTTTCTTAAAGATTCCTTTCTCGTGAGTGGTGTCACGCTGTACAACTTTAACA 14906 | || ||||| || | || || || ||||| | ||| ||||| ||||| || Sbjct 151808 TCGGTTCCCTTCTTGAATAGACCCTTTTCATGAGTTGAGTCGCGCTGAACAACCACTACG 151749 Query 14907 TCAACTTGATTTTCCATTTTTAAATCCTC-GT-TCGTTGTCGATG 14949 |||| ||| ||||||| || ||||| || ||| |||||||| Sbjct 151748 TCAATTTGCGTTTCCATCTTCGTTTCCTCTGTATCG-TGTCGATG 151705 Score = 87.8 bits (96), Expect = 6e-13 Identities = 55/58 (95%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 9529 TTCGTTTCGATGAAACAAATATACC-GATACGAGATCGGGAGTTTTAACAAAAAGTGC 9585 ||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct 94216 TTCGTTTCGATGAAACAAATATACCCGATACGAGATCTGGTGTTTTAACAAAAAGTGC 94273 >seq2064 Length=2442 Score = 102 bits (112), Expect = 3e-17 Identities = 156/216 (72%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 14787 ACAACGTTCCATGTCAGGCCGGAGTGATACGCAACCATATCCTCAAGATCAATTGTGATG 14846 || |||||||| || ||||| |||||||| ||||||||||||||||| || || ||||| Sbjct 897 ACCACGTTCCAGGTGAGGCCCGAGTGATATGCAACCATATCCTCAAGGTCGATCGTGATT 838 Query 14847 ATAGCGCCTTTCTTAAAGATTCCTTTCTCGTGAGTGGTGTCACGCTGTACAACTTTAACA 14906 || |||||||| || | || || || ||||| | || ||||| ||||| || Sbjct 837 TCAGTTCCTTTCTTGAAAAGACCATTTTCATGAGTTGAATCTCGCTGAACAACCACTACG 778 Query 14907 TCAACTTGATTTTCCATTTTTAAATCCTC-GT-TCGTTGTCGATGCGCTTAATATA-CCA 14963 |||| ||| ||||||| | ||||| || ||| |||||||| | ||| || Sbjct 777 TCAATTTGCGTTTCCATCTCCGTTTCCTCTGTGTCG-TGTCGATGAAAAGATAATACCCG 719 Query 14964 ATCAGAGGCGCATCGGTTTTAACAAAAAGTGCTATT 14999 ||| | || || ||||||||||||||||||| Sbjct 718 ATCCG-CTCGACCGGGATTTAACAAAAAGTGCTATT 684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165701306360772