Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_024783.1 Length=44332 Score E Sequences producing significant alignments: (Bits) Value seq768 114 4e-21 >seq768 Length=200800 Score = 114 bits (126), Expect = 4e-21 Identities = 257/373 (69%), Gaps = 20/373 (5%) Strand=Plus/Plus Query 27326 ACAGGTTTCTTCTCTGGCATACGGAAGCCGTTGCCG--GTCCATAAGCAGGTCAGCTTCG 27383 ||||| ||| | |||||||| ||| ||| ||| ||||| | || || ||||| Sbjct 199810 ACAGGCTTCCTTTCTGGCATGACAAAGTCGT--CCGAAGTCCAAAGACAAGTTTTCTTCG 199867 Query 27384 GATATGAATCGCG-GGCGTTGATGTATTCCGGGAAGAGCGGGTGTACGTCATCCTCCGGC 27442 | || | |||||| |||| || || |||||| |||||| |||||| ||| || Sbjct 199868 GGTAAGCATCGCGCGGCGCA-ATATACATCGGGAACCAGGGGTGTGCGTCATTCTCAGGA 199926 Query 27443 AGATATCCCCCATACTCCCACGGGTTGAATGAGTGATCCGGCTTGCGCCACTGGGTG--G 27500 ||||| || ||||||||||| || ||||| | ||| || | ||| ||||| || || | Sbjct 199927 AGATAGCCGCCATACTCCCAGGGATTGAAAGTGTGGTCAGCCTTTCGCCA--GGCTGATG 199984 Query 27501 AAAGCACACTGCGCGGATTCTCAATCATATATGGCACTTCGAAGAAGTCACCCAGGTAAG 27560 | || || || |||||||||||| || || | ||| | | | ||||| | || | Sbjct 199985 ACAGGACGCTAACCGGATTCTCAATGATGTAAGTCACACCCAGGCTATCACCGATGTTCG 200044 Query 27561 CGGCGATCTTCGCGGTGCGCACCGCCTTAAGCTGAAAGGCTGGGTC---TTTAGCCCGCT 27617 |||| ||| |||||| || || || ||| || || || |||| |||| Sbjct 200045 CGGCAATCCGGGCGGTGGCAACAGCTTTCTCCTGGAATAGCGGATCACGTTTA---CGCT 200101 Query 27618 TGCGCGGGAAAG-CTGGCGCACCGCTCACTGCCAGATCCGTACACGGAGGGAATG-CATA 27675 ||| || |||| | | ||||| || || ||||| || || ||||| ||||| | |||| Sbjct 200102 TGC-TGGCAAAGTGTCGAGCACCACTAACGGCCAGGTCAGTGCACGGCGGGAAGGCCATA 200160 Query 27676 GATGATATCCGGC 27688 |||| ||||||| Sbjct 200161 -ATGAAATCCGGC 200172 Score = 93.3 bits (102), Expect = 1e-14 Identities = 246/367 (67%), Gaps = 8/367 (2%) Strand=Plus/Plus Query 27326 ACAGGTTTCTTCTCTGGCATACGGAAGCCGTTGCCGGTCCATAAGCAGGTCAGCTTCGGA 27385 |||||||| |||| ||||| || ||| |||||| | || || |||||| Sbjct 48809 ACAGGTTTTCTCTCGGGCATGACAAAATCGTCAGAGGTCCACAGACAAGTTTTCTTCGGG 48868 Query 27386 TATGAATCGCG-GGCGTTGATGTATTCCGGGAAGAGCGGGTGTACGTCATCCTCCGGCAG 27444 || | |||||| |||| || || |||||| ||||| |||||||||| || || Sbjct 48869 TAAGCATCGCGCGGCGCA-ATATACATCGGGAACCAGGGGTGCGCGTCATCCTCAGGAAG 48927 Query 27445 ATATCCCCCATACTCCCACGGGTTGAATGAGTGATCCGGCTTGCGCCACTGGGTGGAAAG 27504 ||| || || |||||||| || ||||| ||||||| || || | |||| | || || Sbjct 48928 ATAGCCGCCGTACTCCCAGGGATTGAAGGAGTGATTTGGTTTTCTCCACGCAGACGACAG 48987 Query 27505 CACACTGCGCGGATTCTCAATCATATATGGCACTTCGAAGAAGTCACCCAGGTAAGCGGC 27564 || || |||||||||||| || || | ||| | | ||||| | || || || Sbjct 48988 GACGCTCACCGGATTCTCAATGATGTAAGTCACACCAAGCTCCTCACCAATGTTCGCAGC 49047 Query 27565 GATCTTCGCGGTGCGCACCGCCTTAAGCTGAAAGGCTGGGTCTTTAGCCCGCTTGCGCGG 27624 ||| |||||| || ||||| ||| || || || | ||||| | || Sbjct 49048 TATCCGAGCGGTGGCAACAGCCTTCTCCTGGAATAACGGATCACGTTCACGCTTAC-TGG 49106 Query 27625 GAAAGCTG--GCGCACCGCTCACTGCCAGATCCGTACACGGAGGGAATG-CATAGATGAT 27681 |||| || | ||||| || || ||||| || || || |||||||| | |||| || | Sbjct 49107 CAAAG-TGACGAGCACCACTAACAGCCAGGTCAGTGCATGGAGGGAAAGCCATA-ATAAA 49164 Query 27682 ATCCGGC 27688 ||||||| Sbjct 49165 ATCCGGC 49171 Score = 93.3 bits (102), Expect = 1e-14 Identities = 246/367 (67%), Gaps = 8/367 (2%) Strand=Plus/Plus Query 27326 ACAGGTTTCTTCTCTGGCATACGGAAGCCGTTGCCGGTCCATAAGCAGGTCAGCTTCGGA 27385 |||||||| |||| ||||| || ||| |||||| | || || |||||| Sbjct 99145 ACAGGTTTTCTCTCGGGCATGACAAAATCGTCAGAGGTCCACAGACAAGTTTTCTTCGGG 99204 Query 27386 TATGAATCGCG-GGCGTTGATGTATTCCGGGAAGAGCGGGTGTACGTCATCCTCCGGCAG 27444 || | |||||| |||| || || |||||| ||||| |||||||||| || || Sbjct 99205 TAAGCATCGCGCGGCGCA-ATATACATCGGGAACCAGGGGTGCGCGTCATCCTCAGGAAG 99263 Query 27445 ATATCCCCCATACTCCCACGGGTTGAATGAGTGATCCGGCTTGCGCCACTGGGTGGAAAG 27504 ||| || || |||||||| || ||||| ||||||| || || | |||| | || || Sbjct 99264 ATAGCCGCCGTACTCCCAGGGATTGAAGGAGTGATTTGGTTTTCTCCACGCAGACGACAG 99323 Query 27505 CACACTGCGCGGATTCTCAATCATATATGGCACTTCGAAGAAGTCACCCAGGTAAGCGGC 27564 || || |||||||||||| || || | ||| | | ||||| | || || || Sbjct 99324 GACGCTCACCGGATTCTCAATGATGTAAGTCACACCAAGCTCCTCACCAATGTTCGCAGC 99383 Query 27565 GATCTTCGCGGTGCGCACCGCCTTAAGCTGAAAGGCTGGGTCTTTAGCCCGCTTGCGCGG 27624 ||| |||||| || ||||| ||| || || || | ||||| | || Sbjct 99384 TATCCGAGCGGTGGCAACAGCCTTCTCCTGGAATAACGGATCACGTTCACGCTTAC-TGG 99442 Query 27625 GAAAGCTG--GCGCACCGCTCACTGCCAGATCCGTACACGGAGGGAATG-CATAGATGAT 27681 |||| || | ||||| || || ||||| || || || |||||||| | |||| || | Sbjct 99443 CAAAG-TGACGAGCACCACTAACAGCCAGGTCAGTGCATGGAGGGAAAGCCATA-ATAAA 99500 Query 27682 ATCCGGC 27688 ||||||| Sbjct 99501 ATCCGGC 99507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141737127318696