Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq819 95.1 8e-15 seq59 95.1 8e-15 seq1 93.3 3e-14 seq580 89.7 3e-13 seq54 89.7 3e-13 seq281 87.8 1e-12 seq100 87.8 1e-12 seq146 86.0 4e-12 >seq819 Length=180711 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||| || || ||| ||| || || |||||||| |||| Sbjct 10187 ACCACCACGGAGACGGAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 10128 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || |||||||| |||| | ||||| ||| | || Sbjct 10127 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCTGGGGG 10068 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || ||| | ||| |||| ||||||| ||| | Sbjct 10067 AATACCTTCCTTGTCTTGGATCTTGGCTTTGA-CATTGTCAATGGTGTCGGAGCTTTCAA 10009 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | ||||| |||||||||||||| Sbjct 10008 CCTCGAGGGTGATGGTCTTTCCGGTCAGGGTTTTCACAAAGATCTGCAT 9960 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||| || || ||| ||| || || |||||||| |||| Sbjct 178067 ACCACCACGGAGACGGAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 178126 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || |||||||| |||| | ||||| ||| | || Sbjct 178127 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCTGGGGG 178186 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || ||| | ||| |||| ||||||| ||| | Sbjct 178187 AATACCTTCCTTGTCTTGGATCTTGGCTTTGA-CATTGTCAATGGTGTCGGAGCTTTCAA 178245 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | ||||| |||||||||||||| Sbjct 178246 CCTCGAGGGTGATGGTCTTTCCGGTCAGGGTTTTCACAAAGATCTGCAT 178294 >seq59 Length=1152742 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||| || || ||| ||| || || |||||||| |||| Sbjct 893138 ACCACCACGGAGACGGAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 893197 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || |||||||| |||| | ||||| ||| | || Sbjct 893198 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCTGGGGG 893257 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || ||| | ||| |||| ||||||| ||| | Sbjct 893258 AATACCTTCCTTGTCTTGGATCTTGGCTTTGA-CATTGTCAATGGTGTCGGAGCTTTCAA 893316 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | ||||| |||||||||||||| Sbjct 893317 CCTCGAGGGTGATGGTCTTTCCGGTCAGGGTTTTCACAAAGATCTGCAT 893365 >seq1 Length=4167794 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | |||||| || || || ||| || || ||||||||||| | | Sbjct 1162833 CCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAATCTGCG 1162892 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| || | || |||||||| || || | ||||||||| ||| | || Sbjct 1162893 AGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGG 1162952 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | || || | ||| | ||||||| || || || Sbjct 1162953 ATCCCTTCCTTGTCCTGGATCTT-GGCTTTGACGTTGTCGATGGTGTCGGAAGACTCGAC 1163011 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | ||||| || ||||| ||||| Sbjct 1163012 CTCGAGGGTGATGGTCTTTCCAGTAAGGGTTTTCACGAAGATTTGCAT 1163059 >seq580 Length=281551 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||| || || || |||||| || ||||||||||| | Sbjct 199849 CCACCACGAAGACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAATCCGCA 199790 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || | || ||||| || || |||| ||||||||| ||| | || Sbjct 199789 AGGGTACGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 199730 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | | || | ||| | |||||| ||| ||||| Sbjct 199729 ATCCCTTCCTTGTCTTGGATCTT-GGCCTTGACGTTGTCGATGGTGTCAGATGACTCCAC 199671 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || |||||||||||||| Sbjct 199670 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCAT 199623 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || ||||||||||| | || || | | | || ||||| || Sbjct 200737 TGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTCCTTCCATCCTCCAACTGC 200678 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| || |||||||| | |||||| || | || | ||||| ||||| || || Sbjct 200677 TTTCCAGCGAAAATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTT- 200619 Query 33667 TGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCGTTTTACC 33722 || | |||| ||| | |||||| ||| ||||| || | ||||| || || || Sbjct 200618 TGCCTTCACATTGTCGATGGTGTCAGAGCT---CTCCACCTCCAAGGTGATGGTCTTTCC 200562 Query 33723 TGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || || || || |||||||||||| Sbjct 200561 TGTCAAGGTCTTCACGAAGATCTGCATA 200534 >seq54 Length=1192742 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||| || || || |||||| || ||||||||||| | Sbjct 263500 CCACCACGAAGACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAATCCGCA 263441 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || | || ||||| || || |||| ||||||||| ||| | || Sbjct 263440 AGGGTACGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 263381 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | | || | ||| | |||||| ||| ||||| Sbjct 263380 ATCCCTTCCTTGTCTTGGATCTT-GGCCTTGACGTTGTCGATGGTGTCAGATGACTCCAC 263322 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || |||||||||||||| Sbjct 263321 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCAT 263274 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || ||||||||||| | || || | | | || ||||| || Sbjct 264388 TGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTCCTTCCATCCTCCAACTGC 264329 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| || |||||||| | |||||| || | || | ||||| ||||| || || Sbjct 264328 TTTCCAGCGAAAATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTT- 264270 Query 33667 TGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCGTTTTACC 33722 || | |||| ||| | |||||| ||| ||||| || | ||||| || || || Sbjct 264269 TGCCTTCACATTGTCGATGGTGTCAGAGCT---CTCCACCTCCAAGGTGATGGTCTTTCC 264213 Query 33723 TGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || || || || |||||||||||| Sbjct 264212 TGTCAAGGTCTTCACGAAGATCTGCATA 264185 >seq281 Length=531459 Score = 87.8 bits (96), Expect = 1e-12 Identities = 163/237 (69%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || || | ||||| || ||||| ||| || || |||||||| |||| Sbjct 453603 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCA 453544 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| |||| || || ||||| || || | |||||||| || |||| Sbjct 453543 AGGGTCCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGCGGG 453484 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || || |||| ||| ||| | |||||| || || || Sbjct 453483 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CATTGTCGATGGTGTCTGAAGACTCAAC 453425 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGT 33758 || | || ||||| || || |||| ||||| || ||||||||||| ||| ||| Sbjct 453424 CTCCAGAGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTTGCTGT 453368 >seq100 Length=933141 Score = 87.8 bits (96), Expect = 1e-12 Identities = 163/237 (69%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || || | ||||| || ||||| ||| || || |||||||| || | Sbjct 405037 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCA 404978 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| |||| || || ||||| || || | |||||||| || |||| Sbjct 404977 AGGGTCCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 404918 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || || |||| ||| ||| | ||||||| || || || Sbjct 404917 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CATTGTCGATGGTGTCGGAAGACTCAAC 404859 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGT 33758 || | || ||||| || || |||| ||||| || ||||||||||| ||| ||| Sbjct 404858 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTTGCTGT 404802 >seq146 Length=786261 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || ||||| ||| || || |||||||| |||| ||| || || |||| || Sbjct 97616 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTC 97557 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||||| || || | |||||||| || | || | || || ||||| Sbjct 97556 CAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 97497 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| ||| ||| | ||||||| || || || || | || ||||| | Sbjct 97496 GATCTTGGCCTTCA-CATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTCT 97438 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| ||||| || ||||||||||| Sbjct 97437 TCCCCGTTAGGGTTTTCACGAAGATCTGCAT 97407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328695258733440