Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq222 82.4 2e-11 >seq222 Length=596275 Score = 82.4 bits (90), Expect = 2e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 19351 GAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACT 19410 ||||| || ||| | | |||| || | || ||||| ||||||||||| ||| | || Sbjct 106769 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 106828 Query 19411 TATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTC 19470 || || || || |||| |||||| |||||||| | | || || || || || ||| Sbjct 106829 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 106888 Query 19471 AACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTG 19508 || ||| | |||||| |||| ||||| | ||| |||| Sbjct 106889 AATAATTGTCGTTCTTTACACTTCTTCCTAGCTTCTTG 106926 Score = 82.4 bits (90), Expect = 2e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 19351 GAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACT 19410 ||||| || ||| | | |||| || | || ||||| ||||||||||| ||| | || Sbjct 179842 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 179783 Query 19411 TATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTC 19470 || || || || |||| |||||| |||||||| | | || || || || || ||| Sbjct 179782 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 179723 Query 19471 AACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTG 19508 || ||| | |||||| |||| ||||| | ||| |||| Sbjct 179722 AATAATTGTCGTTCTTTACACTTCTTCCTAGCTTCTTG 179685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141145142658156