Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_025464.1
Length=44147
Score E
Sequences producing significant alignments: (Bits) Value
seq222 82.4 2e-11
>seq222
Length=596275
Score = 82.4 bits (90), Expect = 2e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 19351 GAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACT 19410
||||| || ||| | | |||| || | || ||||| ||||||||||| ||| | ||
Sbjct 106769 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 106828
Query 19411 TATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTC 19470
|| || || || |||| |||||| |||||||| | | || || || || || |||
Sbjct 106829 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 106888
Query 19471 AACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTG 19508
|| ||| | |||||| |||| ||||| | ||| ||||
Sbjct 106889 AATAATTGTCGTTCTTTACACTTCTTCCTAGCTTCTTG 106926
Score = 82.4 bits (90), Expect = 2e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 19351 GAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACT 19410
||||| || ||| | | |||| || | || ||||| ||||||||||| ||| | ||
Sbjct 179842 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 179783
Query 19411 TATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTC 19470
|| || || || |||| |||||| |||||||| | | || || || || || |||
Sbjct 179782 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 179723
Query 19471 AACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTG 19508
|| ||| | |||||| |||| ||||| | ||| ||||
Sbjct 179722 AATAATTGTCGTTCTTTACACTTCTTCCTAGCTTCTTG 179685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141145142658156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |