Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_025830.1 Length=120938 Score E Sequences producing significant alignments: (Bits) Value seq768 109 4e-19 >seq768 Length=200800 Score = 109 bits (120), Expect = 4e-19 Identities = 425/662 (64%), Gaps = 16/662 (2%) Strand=Plus/Plus Query 84705 AGCTTTGGCAAAACCTCTTGGGGTTAACGATCTTATAACCTTTGTCTTTTTTGATTTGCC 84764 |||||| ||| || || || | || |||| ||| | ||| || || || ||||| Sbjct 48706 AGCTTTAAAAAATCCCCTGGGTGATAGAGATCGTATCAGCTTCGTTTTGGCAGACTTGCC 48765 Query 84765 ACCCAATTTTAGGTGCTGCTCAGAATACCCGTCTAACACGGGGACGGGTAATTTCTCAGG 84824 |||| || ||||| |||| |||||||| || | || ||| | |||| || Sbjct 48766 GCCCAGCTTGTTTTGCTGTGCAGAGTACCCGTCAGGCAGGCTTACAGGTTTTCTCTCGGG 48825 Query 84825 CATCTTAAAACCATTGCCTGTCCACAAACAAGTCTTTTTAGGGTAGGCATCTCTGGGTTT 84884 ||| |||| | | ||||||| |||||| || || ||||| ||||| | || Sbjct 48826 CATGACAAAATCGTCAGAGGTCCACAGACAAGTTTTCTTCGGGTAAGCATCGCGCGGCGC 48885 Query 84885 TATGTATTCTGGAAAAAATGGATGAACATCATTCTCTGGTAGATACCCGCCGTACTCATA 84944 || || || || | || || | |||| ||| || ||||| ||||||||||| | Sbjct 48886 AATATACATCGGGAACCAGGGGTGCGCGTCATCCTCAGGAAGATAGCCGCCGTACTCCCA 48945 Query 84945 AGGATGAAATGAATAGTCTGGTTTACGCCACAGAGAAGATAGAACACTAACTGGATTTTC 85004 |||| || || | | |||||| | |||| ||| || || || || || ||||| || Sbjct 48946 GGGATTGAAGGAGTGATTTGGTTTTCTCCACGCAGACGACAGGACGCTCACCGGATTCTC 49005 Query 85005 TATCATGTAAGGGCAGCCGTATTCATCTGCCAGCCTTGCTGCCACTTTTGCTGTATTTAC 85064 || ||||||| || || || | | | || || | || || || Sbjct 49006 AATGATGTAAGTCACACCAAGCTCCTCACCAATGTTCGCAGCTATCCGAGCGGTGGCAAC 49065 Query 85065 AGCCTTTATCTGGAATAAAGGGTCTTTTGCAGCTTTTCTTGCGAAATGCGCTGCGCCACT 85124 |||||| ||||||||| || || | || || || || || || || ||||| Sbjct 49066 AGCCTTCTCCTGGAATAACGGATCACGTTCACGCTTACTGGCAAAGTGACGAGCACCACT 49125 Query 85125 AACAGCCATATCTGTGCATGGTGGGAATGC--GAATATAAT---ACTTGGCGTACATATC 85179 |||||||| || |||||||| ||||| || |||| ||| |||| | |||| | | Sbjct 49126 AACAGCCAGGTCAGTGCATGGAGGGAAAGCCATAATAAAATCCGGCTTGCCATACACACC 49185 Query 85180 C-CTATCTCTACTGGGTTAAACTGGTCGTCTATCCAAACATTGATATATTCTATATTTTT 85238 | | ||| | | | | |||| || || || | || || | ||| || || || Sbjct 49186 CGCGATCGCGTCACGTTCGAACTTCTCATCAATAAAGACGTTCACATACTCAATGTTCGG 49245 Query 85239 GTGTTTTATTCTG-----ATACTTT-CATAACCACCGTGATCAGCGCCATCATAGTTAAG 85292 || | | ||| |||||| ||||| | |||||||| || || ||| |||| | Sbjct 49246 ATGCTCCACCCTGGCGTTGTACTTTGCATAATCTCCGTGATCGGCCCCGTCAAAGTTGAA 49305 Query 85293 GCATATTACTTTGTACCCATTCTTTGCCCACTCATAACC--CATGATGCCGGATCCGTCA 85350 ||| || || || | || | ||||||| |||| ||| || || ||||| ||||| Sbjct 49306 GCACATCACCTTATGACCTTGCTTTGCCAGTTCATGACCAGCAAGA--CCGGAACCGTCG 49363 Query 85351 AA 85352 || Sbjct 49364 AA 49365 Score = 109 bits (120), Expect = 4e-19 Identities = 425/662 (64%), Gaps = 16/662 (2%) Strand=Plus/Plus Query 84705 AGCTTTGGCAAAACCTCTTGGGGTTAACGATCTTATAACCTTTGTCTTTTTTGATTTGCC 84764 |||||| ||| || || || | || |||| ||| | ||| || || || ||||| Sbjct 99042 AGCTTTAAAAAATCCCCTGGGTGATAGAGATCGTATCAGCTTCGTTTTGGCAGACTTGCC 99101 Query 84765 ACCCAATTTTAGGTGCTGCTCAGAATACCCGTCTAACACGGGGACGGGTAATTTCTCAGG 84824 |||| || ||||| |||| |||||||| || | || ||| | |||| || Sbjct 99102 GCCCAGCTTGTTTTGCTGTGCAGAGTACCCGTCAGGCAGGCTTACAGGTTTTCTCTCGGG 99161 Query 84825 CATCTTAAAACCATTGCCTGTCCACAAACAAGTCTTTTTAGGGTAGGCATCTCTGGGTTT 84884 ||| |||| | | ||||||| |||||| || || ||||| ||||| | || Sbjct 99162 CATGACAAAATCGTCAGAGGTCCACAGACAAGTTTTCTTCGGGTAAGCATCGCGCGGCGC 99221 Query 84885 TATGTATTCTGGAAAAAATGGATGAACATCATTCTCTGGTAGATACCCGCCGTACTCATA 84944 || || || || | || || | |||| ||| || ||||| ||||||||||| | Sbjct 99222 AATATACATCGGGAACCAGGGGTGCGCGTCATCCTCAGGAAGATAGCCGCCGTACTCCCA 99281 Query 84945 AGGATGAAATGAATAGTCTGGTTTACGCCACAGAGAAGATAGAACACTAACTGGATTTTC 85004 |||| || || | | |||||| | |||| ||| || || || || || ||||| || Sbjct 99282 GGGATTGAAGGAGTGATTTGGTTTTCTCCACGCAGACGACAGGACGCTCACCGGATTCTC 99341 Query 85005 TATCATGTAAGGGCAGCCGTATTCATCTGCCAGCCTTGCTGCCACTTTTGCTGTATTTAC 85064 || ||||||| || || || | | | || || | || || || Sbjct 99342 AATGATGTAAGTCACACCAAGCTCCTCACCAATGTTCGCAGCTATCCGAGCGGTGGCAAC 99401 Query 85065 AGCCTTTATCTGGAATAAAGGGTCTTTTGCAGCTTTTCTTGCGAAATGCGCTGCGCCACT 85124 |||||| ||||||||| || || | || || || || || || || ||||| Sbjct 99402 AGCCTTCTCCTGGAATAACGGATCACGTTCACGCTTACTGGCAAAGTGACGAGCACCACT 99461 Query 85125 AACAGCCATATCTGTGCATGGTGGGAATGC--GAATATAAT---ACTTGGCGTACATATC 85179 |||||||| || |||||||| ||||| || |||| ||| |||| | |||| | | Sbjct 99462 AACAGCCAGGTCAGTGCATGGAGGGAAAGCCATAATAAAATCCGGCTTGCCATACACACC 99521 Query 85180 C-CTATCTCTACTGGGTTAAACTGGTCGTCTATCCAAACATTGATATATTCTATATTTTT 85238 | | ||| | | | | |||| || || || | || || | ||| || || || Sbjct 99522 CGCGATCGCGTCACGTTCGAACTTCTCATCAATAAAGACGTTCACATACTCAATGTTCGG 99581 Query 85239 GTGTTTTATTCTG-----ATACTTT-CATAACCACCGTGATCAGCGCCATCATAGTTAAG 85292 || | | ||| |||||| ||||| | |||||||| || || ||| |||| | Sbjct 99582 ATGCTCCACCCTGGCGTTGTACTTTGCATAATCTCCGTGATCGGCCCCGTCAAAGTTGAA 99641 Query 85293 GCATATTACTTTGTACCCATTCTTTGCCCACTCATAACC--CATGATGCCGGATCCGTCA 85350 ||| || || || | || | ||||||| |||| ||| || || ||||| ||||| Sbjct 99642 GCACATCACCTTATGACCTTGCTTTGCCAGTTCATGACCAGCAAGA--CCGGAACCGTCG 99699 Query 85351 AA 85352 || Sbjct 99700 AA 99701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386866511736898