Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_025830.1
Length=120938
Score E
Sequences producing significant alignments: (Bits) Value
seq768 109 4e-19
>seq768
Length=200800
Score = 109 bits (120), Expect = 4e-19
Identities = 425/662 (64%), Gaps = 16/662 (2%)
Strand=Plus/Plus
Query 84705 AGCTTTGGCAAAACCTCTTGGGGTTAACGATCTTATAACCTTTGTCTTTTTTGATTTGCC 84764
|||||| ||| || || || | || |||| ||| | ||| || || || |||||
Sbjct 48706 AGCTTTAAAAAATCCCCTGGGTGATAGAGATCGTATCAGCTTCGTTTTGGCAGACTTGCC 48765
Query 84765 ACCCAATTTTAGGTGCTGCTCAGAATACCCGTCTAACACGGGGACGGGTAATTTCTCAGG 84824
|||| || ||||| |||| |||||||| || | || ||| | |||| ||
Sbjct 48766 GCCCAGCTTGTTTTGCTGTGCAGAGTACCCGTCAGGCAGGCTTACAGGTTTTCTCTCGGG 48825
Query 84825 CATCTTAAAACCATTGCCTGTCCACAAACAAGTCTTTTTAGGGTAGGCATCTCTGGGTTT 84884
||| |||| | | ||||||| |||||| || || ||||| ||||| | ||
Sbjct 48826 CATGACAAAATCGTCAGAGGTCCACAGACAAGTTTTCTTCGGGTAAGCATCGCGCGGCGC 48885
Query 84885 TATGTATTCTGGAAAAAATGGATGAACATCATTCTCTGGTAGATACCCGCCGTACTCATA 84944
|| || || || | || || | |||| ||| || ||||| ||||||||||| |
Sbjct 48886 AATATACATCGGGAACCAGGGGTGCGCGTCATCCTCAGGAAGATAGCCGCCGTACTCCCA 48945
Query 84945 AGGATGAAATGAATAGTCTGGTTTACGCCACAGAGAAGATAGAACACTAACTGGATTTTC 85004
|||| || || | | |||||| | |||| ||| || || || || || ||||| ||
Sbjct 48946 GGGATTGAAGGAGTGATTTGGTTTTCTCCACGCAGACGACAGGACGCTCACCGGATTCTC 49005
Query 85005 TATCATGTAAGGGCAGCCGTATTCATCTGCCAGCCTTGCTGCCACTTTTGCTGTATTTAC 85064
|| ||||||| || || || | | | || || | || || ||
Sbjct 49006 AATGATGTAAGTCACACCAAGCTCCTCACCAATGTTCGCAGCTATCCGAGCGGTGGCAAC 49065
Query 85065 AGCCTTTATCTGGAATAAAGGGTCTTTTGCAGCTTTTCTTGCGAAATGCGCTGCGCCACT 85124
|||||| ||||||||| || || | || || || || || || || |||||
Sbjct 49066 AGCCTTCTCCTGGAATAACGGATCACGTTCACGCTTACTGGCAAAGTGACGAGCACCACT 49125
Query 85125 AACAGCCATATCTGTGCATGGTGGGAATGC--GAATATAAT---ACTTGGCGTACATATC 85179
|||||||| || |||||||| ||||| || |||| ||| |||| | |||| | |
Sbjct 49126 AACAGCCAGGTCAGTGCATGGAGGGAAAGCCATAATAAAATCCGGCTTGCCATACACACC 49185
Query 85180 C-CTATCTCTACTGGGTTAAACTGGTCGTCTATCCAAACATTGATATATTCTATATTTTT 85238
| | ||| | | | | |||| || || || | || || | ||| || || ||
Sbjct 49186 CGCGATCGCGTCACGTTCGAACTTCTCATCAATAAAGACGTTCACATACTCAATGTTCGG 49245
Query 85239 GTGTTTTATTCTG-----ATACTTT-CATAACCACCGTGATCAGCGCCATCATAGTTAAG 85292
|| | | ||| |||||| ||||| | |||||||| || || ||| |||| |
Sbjct 49246 ATGCTCCACCCTGGCGTTGTACTTTGCATAATCTCCGTGATCGGCCCCGTCAAAGTTGAA 49305
Query 85293 GCATATTACTTTGTACCCATTCTTTGCCCACTCATAACC--CATGATGCCGGATCCGTCA 85350
||| || || || | || | ||||||| |||| ||| || || ||||| |||||
Sbjct 49306 GCACATCACCTTATGACCTTGCTTTGCCAGTTCATGACCAGCAAGA--CCGGAACCGTCG 49363
Query 85351 AA 85352
||
Sbjct 49364 AA 49365
Score = 109 bits (120), Expect = 4e-19
Identities = 425/662 (64%), Gaps = 16/662 (2%)
Strand=Plus/Plus
Query 84705 AGCTTTGGCAAAACCTCTTGGGGTTAACGATCTTATAACCTTTGTCTTTTTTGATTTGCC 84764
|||||| ||| || || || | || |||| ||| | ||| || || || |||||
Sbjct 99042 AGCTTTAAAAAATCCCCTGGGTGATAGAGATCGTATCAGCTTCGTTTTGGCAGACTTGCC 99101
Query 84765 ACCCAATTTTAGGTGCTGCTCAGAATACCCGTCTAACACGGGGACGGGTAATTTCTCAGG 84824
|||| || ||||| |||| |||||||| || | || ||| | |||| ||
Sbjct 99102 GCCCAGCTTGTTTTGCTGTGCAGAGTACCCGTCAGGCAGGCTTACAGGTTTTCTCTCGGG 99161
Query 84825 CATCTTAAAACCATTGCCTGTCCACAAACAAGTCTTTTTAGGGTAGGCATCTCTGGGTTT 84884
||| |||| | | ||||||| |||||| || || ||||| ||||| | ||
Sbjct 99162 CATGACAAAATCGTCAGAGGTCCACAGACAAGTTTTCTTCGGGTAAGCATCGCGCGGCGC 99221
Query 84885 TATGTATTCTGGAAAAAATGGATGAACATCATTCTCTGGTAGATACCCGCCGTACTCATA 84944
|| || || || | || || | |||| ||| || ||||| ||||||||||| |
Sbjct 99222 AATATACATCGGGAACCAGGGGTGCGCGTCATCCTCAGGAAGATAGCCGCCGTACTCCCA 99281
Query 84945 AGGATGAAATGAATAGTCTGGTTTACGCCACAGAGAAGATAGAACACTAACTGGATTTTC 85004
|||| || || | | |||||| | |||| ||| || || || || || ||||| ||
Sbjct 99282 GGGATTGAAGGAGTGATTTGGTTTTCTCCACGCAGACGACAGGACGCTCACCGGATTCTC 99341
Query 85005 TATCATGTAAGGGCAGCCGTATTCATCTGCCAGCCTTGCTGCCACTTTTGCTGTATTTAC 85064
|| ||||||| || || || | | | || || | || || ||
Sbjct 99342 AATGATGTAAGTCACACCAAGCTCCTCACCAATGTTCGCAGCTATCCGAGCGGTGGCAAC 99401
Query 85065 AGCCTTTATCTGGAATAAAGGGTCTTTTGCAGCTTTTCTTGCGAAATGCGCTGCGCCACT 85124
|||||| ||||||||| || || | || || || || || || || |||||
Sbjct 99402 AGCCTTCTCCTGGAATAACGGATCACGTTCACGCTTACTGGCAAAGTGACGAGCACCACT 99461
Query 85125 AACAGCCATATCTGTGCATGGTGGGAATGC--GAATATAAT---ACTTGGCGTACATATC 85179
|||||||| || |||||||| ||||| || |||| ||| |||| | |||| | |
Sbjct 99462 AACAGCCAGGTCAGTGCATGGAGGGAAAGCCATAATAAAATCCGGCTTGCCATACACACC 99521
Query 85180 C-CTATCTCTACTGGGTTAAACTGGTCGTCTATCCAAACATTGATATATTCTATATTTTT 85238
| | ||| | | | | |||| || || || | || || | ||| || || ||
Sbjct 99522 CGCGATCGCGTCACGTTCGAACTTCTCATCAATAAAGACGTTCACATACTCAATGTTCGG 99581
Query 85239 GTGTTTTATTCTG-----ATACTTT-CATAACCACCGTGATCAGCGCCATCATAGTTAAG 85292
|| | | ||| |||||| ||||| | |||||||| || || ||| |||| |
Sbjct 99582 ATGCTCCACCCTGGCGTTGTACTTTGCATAATCTCCGTGATCGGCCCCGTCAAAGTTGAA 99641
Query 85293 GCATATTACTTTGTACCCATTCTTTGCCCACTCATAACC--CATGATGCCGGATCCGTCA 85350
||| || || || | || | ||||||| |||| ||| || || ||||| |||||
Sbjct 99642 GCACATCACCTTATGACCTTGCTTTGCCAGTTCATGACCAGCAAGA--CCGGAACCGTCG 99699
Query 85351 AA 85352
||
Sbjct 99700 AA 99701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 386866511736898
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |