Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_026924.1
Length=174885
Score E
Sequences producing significant alignments: (Bits) Value
seq157 91.5 2e-13
seq222 89.7 6e-13
>seq157
Length=750868
Score = 91.5 bits (100), Expect = 2e-13
Identities = 136/190 (72%), Gaps = 5/190 (3%)
Strand=Plus/Plus
Query 162134 TCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTT 162193
|||||| |||||||| || | || ||||| || ||||| || ||| ||||| | ||
Sbjct 399152 TCAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTT 399211
Query 162194 GTTTCTTC-AAGGATTCCATAACTGGACCCTGAACCCCTTCCATATGATGGGAGTTGCTG 162252
||| ||| |||| || ||||| || || ||||| | || |||||||||||||||| ||
Sbjct 399212 TTTTTTTCCAAGGGTTTCATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTTG 399271
Query 162253 --GTATACTAGGTGGAGCACTTCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATT 162310
|| || || | || || ||| |||||||| || | || || ||| |||| ||
Sbjct 399272 AAGTGTA--GGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACTTT 399329
Query 162311 ATACGAGGAT 162320
|| || |||
Sbjct 399330 ATTTGAAGAT 399339
>seq222
Length=596275
Score = 89.7 bits (98), Expect = 6e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 160617 GGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTC 160676
||||| || || || ||||||||| | |||||||| ||||| || | |||||||| ||
Sbjct 106799 GGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGTTATTTT 106858
Query 160677 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTG 160736
|| | |||||||| |||||||| ||||| || | ||||| | |||||||||||
Sbjct 106859 GGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTA 106918
Query 160737 GC 160738
||
Sbjct 106919 GC 106920
Score = 89.7 bits (98), Expect = 6e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 160617 GGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTC 160676
||||| || || || ||||||||| | |||||||| ||||| || | |||||||| ||
Sbjct 179812 GGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGTTATTTT 179753
Query 160677 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTG 160736
|| | |||||||| |||||||| ||||| || | ||||| | |||||||||||
Sbjct 179752 GGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTA 179693
Query 160737 GC 160738
||
Sbjct 179692 GC 179691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559488739528400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |