Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_026926.1
Length=192108
Score E
Sequences producing significant alignments: (Bits) Value
seq222 89.7 6e-13
seq157 84.2 3e-11
>seq222
Length=596275
Score = 89.7 bits (98), Expect = 6e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 181638 GGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTT 181697
|||||||| || || ||||| ||| | || ||||| ||||| || | || ||||| |||
Sbjct 106799 GGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGTTATTTT 106858
Query 181698 GGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTC 181757
|| | |||||||| ||||||||| ||||| || | ||||| | |||||||||||
Sbjct 106859 GGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTA 106918
Query 181758 GC 181759
||
Sbjct 106919 GC 106920
Score = 89.7 bits (98), Expect = 6e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 181638 GGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTT 181697
|||||||| || || ||||| ||| | || ||||| ||||| || | || ||||| |||
Sbjct 179812 GGTTACAAATTTGGGCAAGAGGAAAAAACCTACAATATCGTAGCTGTTCATGGTTATTTT 179753
Query 181698 GGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTC 181757
|| | |||||||| ||||||||| ||||| || | ||||| | |||||||||||
Sbjct 179752 GGCTGATTGATCTTTCAATATGCTAGTTTCAATAATTGTCGTTCTTTACACTTCTTCCTA 179693
Query 181758 GC 181759
||
Sbjct 179692 GC 179691
>seq157
Length=750868
Score = 84.2 bits (92), Expect = 3e-11
Identities = 147/210 (70%), Gaps = 7/210 (3%)
Strand=Plus/Plus
Query 182808 CAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCCTGTTG 182867
||||| |||||| || | ||| |||||||| || || || || | ||| | ||
Sbjct 399153 CAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTTT 399212
Query 182868 TTCCTTC--AGGGTTTCCACAACTGGACACTCAACCCCTTCCATATGATGGGAGTTGCTG 182925
|| ||| |||||||| | || || ||| | ||| | || |||||||||||||||| ||
Sbjct 399213 TTTTTTCCAAGGGTTTC-ATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTTG 399271
Query 182926 --GTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCACAGTAGAGAATACCTT 182983
|| || ||| | || ||| | | ||||| ||||||| || ||||| |||| ||
Sbjct 399272 AAGTGTA--GGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACTTT 399329
Query 182984 GTATGAAGATGGAGAACAGGCAAACACATT 183013
| ||||||| | || ||||| |||||
Sbjct 399330 ATTTGAAGATAGTGATGGTGCAAATACATT 399359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614600836304960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |