Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_026928.1
Length=189418
Score E
Sequences producing significant alignments: (Bits) Value
seq222 86.0 8e-12
>seq222
Length=596275
Score = 86.0 bits (94), Expect = 8e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 178476 GAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACA 178535
||||| || |||| ||||| || | ||||| || || || ||||| ||| | ||
Sbjct 106769 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 106828
Query 178536 TACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATTC 178595
||||| ||||| || | ||||| || || || | |||||||| ||||||||| |||
Sbjct 106829 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 106888
Query 178596 AACAACTCACGTTCACTGCACTTCTTCCTCGC 178627
|| || | ||||| | ||||||||||| ||
Sbjct 106889 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 106920
Score = 86.0 bits (94), Expect = 8e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 178476 GAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACA 178535
||||| || |||| ||||| || | ||||| || || || ||||| ||| | ||
Sbjct 179842 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 179783
Query 178536 TACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATTC 178595
||||| ||||| || | ||||| || || || | |||||||| ||||||||| |||
Sbjct 179782 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 179723
Query 178596 AACAACTCACGTTCACTGCACTTCTTCCTCGC 178627
|| || | ||||| | ||||||||||| ||
Sbjct 179722 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 179691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605993071088160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |