Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq157 95.1 1e-14 >seq157 Length=750868 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/236 (71%), Gaps = 12/236 (5%) Strand=Plus/Plus Query 180467 TCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACT 180526 |||||| ||||||||||||| ||| |||||| |||||||| || ||| ||||| | | Sbjct 399152 TCAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTT 399211 Query 180527 CTTTCTTC--AGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCT 180584 ||| ||| ||||||| || || || || | ||| | || |||||||||||||||| | Sbjct 399212 TTTTTTTCCAAGGGTTT-CATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTT 399270 Query 180585 G--GTATACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACAC 180642 | || || || | || || ||| || || ||||| | ||||| |||| | || Sbjct 399271 GAAGTGTA--GGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGT--AGAAGATAC 399326 Query 180643 TGTA--TGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAG 180696 | || ||||||| | || ||||| || || | || ||| | |||| |||| Sbjct 399327 TTTATTTGAAGATAGTGATGGTGCAAATACATTCCATGC-TTTAACCCAACTCAAG 399381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610312953260160