Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_027383.1
Length=44613
Score E
Sequences producing significant alignments: (Bits) Value
seq768 125 2e-24
>seq768
Length=200800
Score = 125 bits (138), Expect = 2e-24
Identities = 258/374 (69%), Gaps = 10/374 (3%)
Strand=Plus/Minus
Query 2911 GGCACGCCGGATATCATCTATG-CATTCCCGCCGTGTACGGATCTGGCGGTGAGTGGCGC 2969
|||| ||||||| |||| |||| | ||||||||||| || || ||||| || ||||| ||
Sbjct 200177 GGCAAGCCGGATTTCAT-TATGGCCTTCCCGCCGTGCACTGACCTGGCCGTTAGTGGTGC 200119
Query 2970 GCCAG-CTTTCCCGCGCAAACGCGCCCGCGACCCTGCCTTCCAGCTTAAGGCGGTGCGCA 3028
| | |||| || |||| || || || || |||||| || || || ||
Sbjct 200118 TCGACACTTTGCCA-GCAAGCGTAAACGTGATCCGCTATTCCAGGAGAAAGCTGTTGCCA 200060
Query 3029 CCGCGAAGATTGCAGCTTACCTGGGTGATTTCTTCGAAGTGCCATATATGATTGAGAATC 3088
|||| |||||| || || | |||||| | | | ||| | || || ||||||||||
Sbjct 200059 CCGCCCGGATTGCCGCGAACATCGGTGATAGCCTGGGTGTGACTTACATCATTGAGAATC 200000
Query 3089 CGCGCAGCGTGCTTTCTACCCAATGGCGTAAGCCAGACCACTCGTTTGACCCGTGGGAGT 3148
|| ||||| || || | ||||| ||| | |||||| | || | || |||||||
Sbjct 199999 CGGTTAGCGTCCTGTCATCAGCCTGGCGAAAGGCTGACCACACTTTCAATCCCTGGGAGT 199940
Query 3149 ATGGCGGCTATTTGCCGGAGGATGACGTGCACCCGCTCTTCCCGGAATACATCAACGCC- 3207
||||||||||| | || ||| |||||| ||||| |||||| || || ||||
Sbjct 199939 ATGGCGGCTATCTTCCTGAGAATGACGCACACCCCTGGTTCCCGATGTATAT-TGCGCCG 199881
Query 3208 CGCGATTCATATCCGAAGCTGACCTGCTTATGGAC--CGGCAACGGCTTCCGTATGCCAG 3265
|||||| | || |||||| || || | ||||| ||| ||| ||| |||||||
Sbjct 199880 CGCGATGCTTACCCGAAGAAAACTTGTCTTTGGACTTCGG--ACGACTTTGTCATGCCAG 199823
Query 3266 AGAAAAAGCCGGTA 3279
| | ||||| |||
Sbjct 199822 AAAGGAAGCCTGTA 199809
Score = 98.7 bits (108), Expect = 3e-16
Identities = 251/373 (67%), Gaps = 8/373 (2%)
Strand=Plus/Minus
Query 2911 GGCACGCCGGATATCATCTATG-CATTCCCGCCGTGTACGGATCTGGCGGTGAGTGGCGC 2969
|||| ||||||| | || |||| | ||||| || || || || ||||| || ||||| ||
Sbjct 49176 GGCAAGCCGGATTTTAT-TATGGCTTTCCCTCCATGCACTGACCTGGCTGTTAGTGGTGC 49118
Query 2970 GC--CAGCTTTCCCGCGCAAACGCGCCCGCGACCCTGCCTTCCAGCTTAAGGCGGTGCGC 3027
| || |||| || | || || | || || || |||||| ||||| || |
Sbjct 49117 TCGTCA-CTTTGCCA-GTAAGCGTGAACGTGATCCGTTATTCCAGGAGAAGGCTGTTGCC 49060
Query 3028 ACCGCGAAGATTGCAGCTTACCTGGGTGATTTCTTCGAAGTGCCATATATGATTGAGAAT 3087
||||| ||| || || || | ||||| | | ||| | || || |||||||||
Sbjct 49059 ACCGCTCGGATAGCTGCGAACATTGGTGAGGAGCTTGGTGTGACTTACATCATTGAGAAT 49000
Query 3088 CCGCGCAGCGTGCTTTCTACCCAATGGCGTAAGCCAGACCACTCGTTTGACCCGTGGGAG 3147
||| ||||| || || | ||| | || ||| | ||||| || | || ||||||
Sbjct 48999 CCGGTGAGCGTCCTGTCGTCTGCGTGGAGAAAACCAAATCACTCCTTCAATCCCTGGGAG 48940
Query 3148 TATGGCGGCTATTTGCCGGAGGATGACGTGCACCCGCTCTTCCCGGAATACATCAACGCC 3207
|| ||||||||| | || |||||||||| |||||| |||||| || || ||||
Sbjct 48939 TACGGCGGCTATCTTCCTGAGGATGACGCGCACCCCTGGTTCCCGATGTATAT-TGCGCC 48881
Query 3208 -CGCGATTCATATCCGAAGCTGACCTGCTTATGGACCGGCAACGGCTTCCGTATGCCAGA 3266
|||||| | || |||||| || || | |||||| ||| || ||||| ||
Sbjct 48880 GCGCGATGCTTACCCGAAGAAAACTTGTCTGTGGACCTCTGACGATTTTGTCATGCCCGA 48821
Query 3267 GAAAAAGCCGGTA 3279
|| ||| || |||
Sbjct 48820 GAGAAAACCTGTA 48808
Score = 98.7 bits (108), Expect = 3e-16
Identities = 251/373 (67%), Gaps = 8/373 (2%)
Strand=Plus/Minus
Query 2911 GGCACGCCGGATATCATCTATG-CATTCCCGCCGTGTACGGATCTGGCGGTGAGTGGCGC 2969
|||| ||||||| | || |||| | ||||| || || || || ||||| || ||||| ||
Sbjct 99512 GGCAAGCCGGATTTTAT-TATGGCTTTCCCTCCATGCACTGACCTGGCTGTTAGTGGTGC 99454
Query 2970 GC--CAGCTTTCCCGCGCAAACGCGCCCGCGACCCTGCCTTCCAGCTTAAGGCGGTGCGC 3027
| || |||| || | || || | || || || |||||| ||||| || |
Sbjct 99453 TCGTCA-CTTTGCCA-GTAAGCGTGAACGTGATCCGTTATTCCAGGAGAAGGCTGTTGCC 99396
Query 3028 ACCGCGAAGATTGCAGCTTACCTGGGTGATTTCTTCGAAGTGCCATATATGATTGAGAAT 3087
||||| ||| || || || | ||||| | | ||| | || || |||||||||
Sbjct 99395 ACCGCTCGGATAGCTGCGAACATTGGTGAGGAGCTTGGTGTGACTTACATCATTGAGAAT 99336
Query 3088 CCGCGCAGCGTGCTTTCTACCCAATGGCGTAAGCCAGACCACTCGTTTGACCCGTGGGAG 3147
||| ||||| || || | ||| | || ||| | ||||| || | || ||||||
Sbjct 99335 CCGGTGAGCGTCCTGTCGTCTGCGTGGAGAAAACCAAATCACTCCTTCAATCCCTGGGAG 99276
Query 3148 TATGGCGGCTATTTGCCGGAGGATGACGTGCACCCGCTCTTCCCGGAATACATCAACGCC 3207
|| ||||||||| | || |||||||||| |||||| |||||| || || ||||
Sbjct 99275 TACGGCGGCTATCTTCCTGAGGATGACGCGCACCCCTGGTTCCCGATGTATAT-TGCGCC 99217
Query 3208 -CGCGATTCATATCCGAAGCTGACCTGCTTATGGACCGGCAACGGCTTCCGTATGCCAGA 3266
|||||| | || |||||| || || | |||||| ||| || ||||| ||
Sbjct 99216 GCGCGATGCTTACCCGAAGAAAACTTGTCTGTGGACCTCTGACGATTTTGTCATGCCCGA 99157
Query 3267 GAAAAAGCCGGTA 3279
|| ||| || |||
Sbjct 99156 GAGAAAACCTGTA 99144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 142636304019300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |