Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_027383.1 Length=44613 Score E Sequences producing significant alignments: (Bits) Value seq768 125 2e-24 >seq768 Length=200800 Score = 125 bits (138), Expect = 2e-24 Identities = 258/374 (69%), Gaps = 10/374 (3%) Strand=Plus/Minus Query 2911 GGCACGCCGGATATCATCTATG-CATTCCCGCCGTGTACGGATCTGGCGGTGAGTGGCGC 2969 |||| ||||||| |||| |||| | ||||||||||| || || ||||| || ||||| || Sbjct 200177 GGCAAGCCGGATTTCAT-TATGGCCTTCCCGCCGTGCACTGACCTGGCCGTTAGTGGTGC 200119 Query 2970 GCCAG-CTTTCCCGCGCAAACGCGCCCGCGACCCTGCCTTCCAGCTTAAGGCGGTGCGCA 3028 | | |||| || |||| || || || || |||||| || || || || Sbjct 200118 TCGACACTTTGCCA-GCAAGCGTAAACGTGATCCGCTATTCCAGGAGAAAGCTGTTGCCA 200060 Query 3029 CCGCGAAGATTGCAGCTTACCTGGGTGATTTCTTCGAAGTGCCATATATGATTGAGAATC 3088 |||| |||||| || || | |||||| | | | ||| | || || |||||||||| Sbjct 200059 CCGCCCGGATTGCCGCGAACATCGGTGATAGCCTGGGTGTGACTTACATCATTGAGAATC 200000 Query 3089 CGCGCAGCGTGCTTTCTACCCAATGGCGTAAGCCAGACCACTCGTTTGACCCGTGGGAGT 3148 || ||||| || || | ||||| ||| | |||||| | || | || ||||||| Sbjct 199999 CGGTTAGCGTCCTGTCATCAGCCTGGCGAAAGGCTGACCACACTTTCAATCCCTGGGAGT 199940 Query 3149 ATGGCGGCTATTTGCCGGAGGATGACGTGCACCCGCTCTTCCCGGAATACATCAACGCC- 3207 ||||||||||| | || ||| |||||| ||||| |||||| || || |||| Sbjct 199939 ATGGCGGCTATCTTCCTGAGAATGACGCACACCCCTGGTTCCCGATGTATAT-TGCGCCG 199881 Query 3208 CGCGATTCATATCCGAAGCTGACCTGCTTATGGAC--CGGCAACGGCTTCCGTATGCCAG 3265 |||||| | || |||||| || || | ||||| ||| ||| ||| ||||||| Sbjct 199880 CGCGATGCTTACCCGAAGAAAACTTGTCTTTGGACTTCGG--ACGACTTTGTCATGCCAG 199823 Query 3266 AGAAAAAGCCGGTA 3279 | | ||||| ||| Sbjct 199822 AAAGGAAGCCTGTA 199809 Score = 98.7 bits (108), Expect = 3e-16 Identities = 251/373 (67%), Gaps = 8/373 (2%) Strand=Plus/Minus Query 2911 GGCACGCCGGATATCATCTATG-CATTCCCGCCGTGTACGGATCTGGCGGTGAGTGGCGC 2969 |||| ||||||| | || |||| | ||||| || || || || ||||| || ||||| || Sbjct 49176 GGCAAGCCGGATTTTAT-TATGGCTTTCCCTCCATGCACTGACCTGGCTGTTAGTGGTGC 49118 Query 2970 GC--CAGCTTTCCCGCGCAAACGCGCCCGCGACCCTGCCTTCCAGCTTAAGGCGGTGCGC 3027 | || |||| || | || || | || || || |||||| ||||| || | Sbjct 49117 TCGTCA-CTTTGCCA-GTAAGCGTGAACGTGATCCGTTATTCCAGGAGAAGGCTGTTGCC 49060 Query 3028 ACCGCGAAGATTGCAGCTTACCTGGGTGATTTCTTCGAAGTGCCATATATGATTGAGAAT 3087 ||||| ||| || || || | ||||| | | ||| | || || ||||||||| Sbjct 49059 ACCGCTCGGATAGCTGCGAACATTGGTGAGGAGCTTGGTGTGACTTACATCATTGAGAAT 49000 Query 3088 CCGCGCAGCGTGCTTTCTACCCAATGGCGTAAGCCAGACCACTCGTTTGACCCGTGGGAG 3147 ||| ||||| || || | ||| | || ||| | ||||| || | || |||||| Sbjct 48999 CCGGTGAGCGTCCTGTCGTCTGCGTGGAGAAAACCAAATCACTCCTTCAATCCCTGGGAG 48940 Query 3148 TATGGCGGCTATTTGCCGGAGGATGACGTGCACCCGCTCTTCCCGGAATACATCAACGCC 3207 || ||||||||| | || |||||||||| |||||| |||||| || || |||| Sbjct 48939 TACGGCGGCTATCTTCCTGAGGATGACGCGCACCCCTGGTTCCCGATGTATAT-TGCGCC 48881 Query 3208 -CGCGATTCATATCCGAAGCTGACCTGCTTATGGACCGGCAACGGCTTCCGTATGCCAGA 3266 |||||| | || |||||| || || | |||||| ||| || ||||| || Sbjct 48880 GCGCGATGCTTACCCGAAGAAAACTTGTCTGTGGACCTCTGACGATTTTGTCATGCCCGA 48821 Query 3267 GAAAAAGCCGGTA 3279 || ||| || ||| Sbjct 48820 GAGAAAACCTGTA 48808 Score = 98.7 bits (108), Expect = 3e-16 Identities = 251/373 (67%), Gaps = 8/373 (2%) Strand=Plus/Minus Query 2911 GGCACGCCGGATATCATCTATG-CATTCCCGCCGTGTACGGATCTGGCGGTGAGTGGCGC 2969 |||| ||||||| | || |||| | ||||| || || || || ||||| || ||||| || Sbjct 99512 GGCAAGCCGGATTTTAT-TATGGCTTTCCCTCCATGCACTGACCTGGCTGTTAGTGGTGC 99454 Query 2970 GC--CAGCTTTCCCGCGCAAACGCGCCCGCGACCCTGCCTTCCAGCTTAAGGCGGTGCGC 3027 | || |||| || | || || | || || || |||||| ||||| || | Sbjct 99453 TCGTCA-CTTTGCCA-GTAAGCGTGAACGTGATCCGTTATTCCAGGAGAAGGCTGTTGCC 99396 Query 3028 ACCGCGAAGATTGCAGCTTACCTGGGTGATTTCTTCGAAGTGCCATATATGATTGAGAAT 3087 ||||| ||| || || || | ||||| | | ||| | || || ||||||||| Sbjct 99395 ACCGCTCGGATAGCTGCGAACATTGGTGAGGAGCTTGGTGTGACTTACATCATTGAGAAT 99336 Query 3088 CCGCGCAGCGTGCTTTCTACCCAATGGCGTAAGCCAGACCACTCGTTTGACCCGTGGGAG 3147 ||| ||||| || || | ||| | || ||| | ||||| || | || |||||| Sbjct 99335 CCGGTGAGCGTCCTGTCGTCTGCGTGGAGAAAACCAAATCACTCCTTCAATCCCTGGGAG 99276 Query 3148 TATGGCGGCTATTTGCCGGAGGATGACGTGCACCCGCTCTTCCCGGAATACATCAACGCC 3207 || ||||||||| | || |||||||||| |||||| |||||| || || |||| Sbjct 99275 TACGGCGGCTATCTTCCTGAGGATGACGCGCACCCCTGGTTCCCGATGTATAT-TGCGCC 99217 Query 3208 -CGCGATTCATATCCGAAGCTGACCTGCTTATGGACCGGCAACGGCTTCCGTATGCCAGA 3266 |||||| | || |||||| || || | |||||| ||| || ||||| || Sbjct 99216 GCGCGATGCTTACCCGAAGAAAACTTGTCTGTGGACCTCTGACGATTTTGTCATGCCCGA 99157 Query 3267 GAAAAAGCCGGTA 3279 || ||| || ||| Sbjct 99156 GAGAAAACCTGTA 99144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142636304019300