Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq580 95.1 1e-14 seq54 95.1 1e-14 seq1309 91.5 1e-13 seq139 91.5 1e-13 seq1 89.7 4e-13 seq819 86.0 5e-12 seq215 86.0 5e-12 seq59 86.0 5e-12 seq687 82.4 6e-11 >seq580 Length=281551 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | ||||| || | || || || ||||| || |||||||| Sbjct 199621 CCACCGCGAAGACGGAGCACCAAGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCA 199562 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||||||||| || || ||| | || |||||||| || ||||| || Sbjct 199561 AGGGTTCGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 199502 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||||| || | | | || | ||||| | | || || Sbjct 199501 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGATGACTCCACC 199442 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || ||||||||||| ||||||||||| Sbjct 199441 TCGAGGGTGATGGTCTTGCCGGTAAGAGTTTTCACGAAGATTTGCAT 199395 >seq54 Length=1192742 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | ||||| || | || || || ||||| || |||||||| Sbjct 263272 CCACCGCGAAGACGGAGCACCAAGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCA 263213 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||||||||| || || ||| | || |||||||| || ||||| || Sbjct 263212 AGGGTTCGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 263153 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||||| || | | | || | ||||| | | || || Sbjct 263152 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGATGACTCCACC 263093 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || ||||||||||| ||||||||||| Sbjct 263092 TCGAGGGTGATGGTCTTGCCGGTAAGAGTTTTCACGAAGATTTGCAT 263046 >seq1309 Length=78448 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 27058 CTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAA 27117 |||| || || |||||||| || | |||| ||||||||||||| || |||||| | | Sbjct 62323 CTTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGA 62382 Query 27118 TGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTT 27177 |||| ||||| || |||||||| | ||||| || || ||||||| || | | | Sbjct 62383 TGAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 62442 Query 27178 CTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237 | | ||||| || || || || || || || | || || || || |||||||| | Sbjct 62443 CAATGGTGTCGCTGCTCTCGACCTCGAGGGTGATGGTCTTCCCGGTTAGGGTTTTCACGA 62502 Query 27238 AGATTTGCAT 27247 | || ||||| Sbjct 62503 AAATCTGCAT 62512 >seq139 Length=803459 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || || || |||||||| || | |||| ||||||||||||| || |||||| | ||| Sbjct 751895 TTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATG 751954 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 || ||||| || |||||||| | ||||| || || ||||||| || | | || Sbjct 751955 AGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 752014 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239 | ||||| || || || || ||||| || | || || || || |||||||| || Sbjct 752015 ATGGTGTCGCTGCTCTCGACCTCGAGAGTGATGGTCTTCCCGGTTAGGGTTTTCACGAAA 752074 Query 27240 ATTTGCAT 27247 || ||||| Sbjct 752075 ATCTGCAT 752082 >seq1 Length=4167794 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| || | ||||| || | || || || || || || ||||| || Sbjct 1162831 TGCCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAATCTG 1162890 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | || ||||||||||||| || |||||| | || |||||||| || || || | Sbjct 1162891 CGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGG 1162950 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || ||||||| ||| | | | || | ||||| | | || | Sbjct 1162951 GGATCCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAAGACTCGA 1163010 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | || || || || |||||||| ||||||||||| Sbjct 1163011 CCTCGAGGGTGATGGTCTTTCCAGTAAGGGTTTTCACGAAGATTTGCAT 1163059 >seq819 Length=180711 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| |||| |||||||| || ||| Sbjct 10156 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 10097 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | || || || || || | ||| || || || ||||||| ||| Sbjct 10096 GCAAATATCAGCCTTTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGCTTTG 10037 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | |||||| || || || || | || || ||||| ||| Sbjct 10036 ACATTGTCAATGGTGTCGGAGCTTTCAACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTT 9977 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 9976 TTCACAAAGATCTGCAT 9960 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| |||| |||||||| || ||| Sbjct 178098 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 178157 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | || || || || || | ||| || || || ||||||| ||| Sbjct 178158 GCAAATATCAGCCTTTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGCTTTG 178217 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | |||||| || || || || | || || ||||| ||| Sbjct 178218 ACATTGTCAATGGTGTCGGAGCTTTCAACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTT 178277 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 178278 TTCACAAAGATCTGCAT 178294 >seq215 Length=606900 Score = 86.0 bits (94), Expect = 5e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 27058 CTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 |||| || || |||||||| ||| ||| || ||||||||||||| || |||||| | Sbjct 55606 CTTTCTGGATGTTGTAGTCAGCTAGGGTTCGGC-CGTCTTCGAGCTGCTTGCCGGCGAAG 55664 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || ||||| || ||||| || | ||||| || || ||||||| || | | Sbjct 55665 ATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 55724 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | |||||| || || || || ||||| || | || || || || |||||||| Sbjct 55725 TCGATAGTGTCGCTGCTCTCGACCTCAAGAGTGATGGTCTTCCCGGTTAGGGTTTTCACG 55784 Query 27237 AAGATTTGCAT 27247 || || ||||| Sbjct 55785 AAAATCTGCAT 55795 >seq59 Length=1152742 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| |||| |||||||| || ||| Sbjct 893169 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 893228 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | || || || || || | ||| || || || ||||||| ||| Sbjct 893229 GCAAATATCAGCCTTTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGCTTTG 893288 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | |||||| || || || || | || || ||||| ||| Sbjct 893289 ACATTGTCAATGGTGTCGGAGCTTTCAACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTT 893348 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 893349 TTCACAAAGATCTGCAT 893365 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| || | ||||| || | || || || |||||||| || || || Sbjct 731051 CCACCACGCAATCGGAGCACCAAGTGGAGAGTCGATTCCTTTTGAATGTTATAATCAGCA 730992 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| ||||| ||||| ||| | ||||| | ||| || ||||| || Sbjct 730991 AGCGTGCGACCATCTTCAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGA 730932 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| |||||| || | | || | || || | | ||||||| Sbjct 730931 ATGCCCTCCTTATCCTGGATCTTTGCCTTAACATTATCAATGGTATCCGAGCTTTCAACT 730872 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || || | || || || || || || ||||||||||||||| Sbjct 730871 TCCAAGGTGATTGTCTTACCGGTAAGGGTCTTGACAAAGATTTGCATA 730824 >seq687 Length=229775 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| || | ||||| || | || || || |||||||| || || || Sbjct 53570 CCACCACGCAATCGGAGCACCAAGTGGAGAGTCGATTCCTTTTGAATGTTATAATCAGCA 53511 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| ||||| ||||| ||| | ||||| | ||| || ||||| || Sbjct 53510 AGCGTGCGACCATCTTCAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGA 53451 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| |||||| || | | || | || || | | ||||||| Sbjct 53450 ATGCCCTCCTTATCCTGGATCTTTGCCTTAACATTATCAATGGTATCCGAGCTTTCAACT 53391 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || || | || || || || || || ||||||||||||||| Sbjct 53390 TCCAAGGTGATTGTCTTACCGGTAAGGGTCTTGACAAAGATTTGCATA 53343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424923099666384