Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_028774.1 Length=48754 Score E Sequences producing significant alignments: (Bits) Value seq768 163 9e-36 >seq768 Length=200800 Score = 163 bits (180), Expect = 9e-36 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 37828 GTATTTAGCTTCGAAAGTCGTTCCGTCAGATACACTGAAGCCAACTTCCTCGCGGTACAG 37887 |||||| || || || || || || || | | ||| || || | || ||||| | | Sbjct 197113 GTATTTGGCCTCAAAGGTTGTGCCATCTGCGATACTAAAACCGATCTCTTCGCGAAATAA 197172 Query 37888 CGTCCAGCGGCATCCGTCACGGTCGAAGATGTATCCAGCAACCGCACCGAGCGCACGACC 37947 ||||| ||||||||||| || |||||||| ||||| || | ||||| || ||||| Sbjct 197173 TGTCCAACGGCATCCGTCCTCATCAAAGATGTAACCAGCTACGCCGCCGAGAGCGCGACC 197232 Query 37948 ACTTTCTACCTGGTAGCGCTTGCCGACGCTGAAGGATTTTTTCATCGGGTTGCTATGGTC 38007 |||||||||||||| ||||| || || |||| ||||||||||||||||||| |||||| Sbjct 197233 GCTTTCTACCTGGTAACGCTTTCCAACTTTGAATGATTTTTTCATCGGGTTGCGATGGTC 197292 Query 38008 AAGGCCGACGCATTTTAGCGTTTTGGTTTTGAGTTCGATGAACGTCGC 38055 ||| ||| ||| |||||||| || ||||| | ||| |||| |||| Sbjct 197293 AAGTCCGGTGCACTTTAGCGTCTTTGTTTTCAACTCGGTGAATTTCGC 197340 Score = 82.4 bits (90), Expect = 2e-11 Identities = 73/90 (81%), Gaps = 5/90 (6%) Strand=Plus/Minus Query 45308 AATAGCACTTTTTGTTAAAACTGCCGTAACGTCATTTGATAAAGTGGCGTTACTGAAGTG 45367 |||||||| |||||||| | |||||||| |||||||||||||||||| ||| | ||| Sbjct 197604 AATAGCACGATTTGTTAATATTGCCGTAAGGTCATTTGATAAAGTGGCCTTATTCAAGAT 197545 Query 45368 AACAATCCAATCAGGAGC-AACGCAATGAA 45396 || |||||||||||| | ||| ||||| Sbjct 197544 AA----CCAATCAGGAGCTAGCGCCATGAA 197519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155887160664144