Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_028774.1
Length=48754
Score E
Sequences producing significant alignments: (Bits) Value
seq768 163 9e-36
>seq768
Length=200800
Score = 163 bits (180), Expect = 9e-36
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 37828 GTATTTAGCTTCGAAAGTCGTTCCGTCAGATACACTGAAGCCAACTTCCTCGCGGTACAG 37887
|||||| || || || || || || || | | ||| || || | || ||||| | |
Sbjct 197113 GTATTTGGCCTCAAAGGTTGTGCCATCTGCGATACTAAAACCGATCTCTTCGCGAAATAA 197172
Query 37888 CGTCCAGCGGCATCCGTCACGGTCGAAGATGTATCCAGCAACCGCACCGAGCGCACGACC 37947
||||| ||||||||||| || |||||||| ||||| || | ||||| || |||||
Sbjct 197173 TGTCCAACGGCATCCGTCCTCATCAAAGATGTAACCAGCTACGCCGCCGAGAGCGCGACC 197232
Query 37948 ACTTTCTACCTGGTAGCGCTTGCCGACGCTGAAGGATTTTTTCATCGGGTTGCTATGGTC 38007
|||||||||||||| ||||| || || |||| ||||||||||||||||||| ||||||
Sbjct 197233 GCTTTCTACCTGGTAACGCTTTCCAACTTTGAATGATTTTTTCATCGGGTTGCGATGGTC 197292
Query 38008 AAGGCCGACGCATTTTAGCGTTTTGGTTTTGAGTTCGATGAACGTCGC 38055
||| ||| ||| |||||||| || ||||| | ||| |||| ||||
Sbjct 197293 AAGTCCGGTGCACTTTAGCGTCTTTGTTTTCAACTCGGTGAATTTCGC 197340
Score = 82.4 bits (90), Expect = 2e-11
Identities = 73/90 (81%), Gaps = 5/90 (6%)
Strand=Plus/Minus
Query 45308 AATAGCACTTTTTGTTAAAACTGCCGTAACGTCATTTGATAAAGTGGCGTTACTGAAGTG 45367
|||||||| |||||||| | |||||||| |||||||||||||||||| ||| | |||
Sbjct 197604 AATAGCACGATTTGTTAATATTGCCGTAAGGTCATTTGATAAAGTGGCCTTATTCAAGAT 197545
Query 45368 AACAATCCAATCAGGAGC-AACGCAATGAA 45396
|| |||||||||||| | ||| |||||
Sbjct 197544 AA----CCAATCAGGAGCTAGCGCCATGAA 197519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155887160664144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |