Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_028901.1
Length=43900
Score E
Sequences producing significant alignments: (Bits) Value
seq768 104 7e-18
>seq768
Length=200800
Score = 104 bits (114), Expect = 7e-18
Identities = 252/370 (68%), Gaps = 14/370 (4%)
Strand=Plus/Minus
Query 1395 GCCAGATATCATCTATG-CGTTTCCTCCGTGCACGGATCTGGCAGTGAGCGGCGCGCCAG 1453
||| ||| |||| |||| | || || |||||||| || ||||| || || || || | |
Sbjct 200172 GCCGGATTTCAT-TATGGCCTTCCCGCCGTGCACTGACCTGGCCGTTAGTGGTGCTCGAC 200114
Query 1454 -CTTTCCCGCGCAAACGTGCAAAAGACCCCGCCTTTCAGCTTAAGGCGGTGCGCACCGCG 1512
|||| || |||| ||| | || || || ||| || || || ||||||
Sbjct 200113 ACTTTGCCA-GCAAGCGTAAACGTGATCCGCTATTCCAGGAGAAAGCTGTTGCCACCGCC 200055
Query 1513 AAGATCGCCGCTTACCTGGGTGACTTCTTCGAAGTGCCATATATGATTGAGAATCCGCGC 1572
||| ||||| || | ||||| | | | ||| | || || ||||||||||||
Sbjct 200054 CGGATTGCCGCGAACATCGGTGATAGCCTGGGTGTGACTTACATCATTGAGAATCCGGTT 199995
Query 1573 AGTGTGCTTTC--CACCCAGTGGCGCAAGCCGGATCACTCGTTCGACCCGTGGGAGTATG 1630
|| || || || || || ||||| ||| | || ||| | ||| | || ||||||||||
Sbjct 199994 AGCGTCCTGTCATCAGCC--TGGCGAAAGGCTGACCACACTTTCAATCCCTGGGAGTATG 199937
Query 1631 GGGGGTATCTGCCGGAGGATGACGTACACCCGCTCTTCCCGGAATACATCAACGCC-CGC 1689
| || ||||| || ||| |||||| |||||| |||||| || || |||| |||
Sbjct 199936 GCGGCTATCTTCCTGAGAATGACGCACACCCCTGGTTCCCGATGTATAT-TGCGCCGCGC 199878
Query 1690 GATTCATATCCGAAGCTGACTTGCTTATGGAC--CGGCAACGGCTTCCGTATGCCAGAGA 1747
||| | || |||||| ||||| | ||||| ||| ||| ||| |||||||| |
Sbjct 199877 GATGCTTACCCGAAGAAAACTTGTCTTTGGACTTCGG--ACGACTTTGTCATGCCAGAAA 199820
Query 1748 AGAAACCTGT 1757
||| |||||
Sbjct 199819 GGAAGCCTGT 199810
Score = 87.8 bits (96), Expect = 5e-13
Identities = 245/367 (67%), Gaps = 8/367 (2%)
Strand=Plus/Minus
Query 1395 GCCAGATATCATCTATGCGTTTCC-TCCGTGCACGGATCTGGCAGTGAGCGGCGCGC--C 1451
||| ||| | || |||| ||||| ||| ||||| || ||||| || || || || | |
Sbjct 49171 GCCGGATTTTAT-TATGGCTTTCCCTCCATGCACTGACCTGGCTGTTAGTGGTGCTCGTC 49113
Query 1452 AGCTTTCCCGCGCAAACGTGCAAAAGACCCCGCCTTTCAGCTTAAGGCGGTGCGCACCGC 1511
| |||| || | || |||| | || || || ||| ||||| || ||||||
Sbjct 49112 A-CTTTGCCA-GTAAGCGTGAACGTGATCCGTTATTCCAGGAGAAGGCTGTTGCCACCGC 49055
Query 1512 GAAGATCGCCGCTTACCTGGGTGACTTCTTCGAAGTGCCATATATGATTGAGAATCCGCG 1571
||| || || || | ||||| | | ||| | || || ||||||||||||
Sbjct 49054 TCGGATAGCTGCGAACATTGGTGAGGAGCTTGGTGTGACTTACATCATTGAGAATCCGGT 48995
Query 1572 CAGTGTGCTTTCCACCCAGTGGCGCAAGCCGGATCACTCGTTCGACCCGTGGGAGTATGG 1631
|| || || || | |||| | || || ||||||| ||| | || |||||||| ||
Sbjct 48994 GAGCGTCCTGTCGTCTGCGTGGAGAAAACCAAATCACTCCTTCAATCCCTGGGAGTACGG 48935
Query 1632 GGGGTATCTGCCGGAGGATGACGTACACCCGCTCTTCCCGGAATACATCAACGCC-CGCG 1690
|| ||||| || |||||||||| ||||| |||||| || || |||| ||||
Sbjct 48934 CGGCTATCTTCCTGAGGATGACGCGCACCCCTGGTTCCCGATGTATAT-TGCGCCGCGCG 48876
Query 1691 ATTCATATCCGAAGCTGACTTGCTTATGGACCGGCAACGGCTTCCGTATGCCAGAGAAGA 1750
|| | || |||||| ||||| | |||||| ||| || ||||| |||| |
Sbjct 48875 ATGCTTACCCGAAGAAAACTTGTCTGTGGACCTCTGACGATTTTGTCATGCCCGAGAGAA 48816
Query 1751 AACCTGT 1757
|||||||
Sbjct 48815 AACCTGT 48809
Score = 87.8 bits (96), Expect = 5e-13
Identities = 245/367 (67%), Gaps = 8/367 (2%)
Strand=Plus/Minus
Query 1395 GCCAGATATCATCTATGCGTTTCC-TCCGTGCACGGATCTGGCAGTGAGCGGCGCGC--C 1451
||| ||| | || |||| ||||| ||| ||||| || ||||| || || || || | |
Sbjct 99507 GCCGGATTTTAT-TATGGCTTTCCCTCCATGCACTGACCTGGCTGTTAGTGGTGCTCGTC 99449
Query 1452 AGCTTTCCCGCGCAAACGTGCAAAAGACCCCGCCTTTCAGCTTAAGGCGGTGCGCACCGC 1511
| |||| || | || |||| | || || || ||| ||||| || ||||||
Sbjct 99448 A-CTTTGCCA-GTAAGCGTGAACGTGATCCGTTATTCCAGGAGAAGGCTGTTGCCACCGC 99391
Query 1512 GAAGATCGCCGCTTACCTGGGTGACTTCTTCGAAGTGCCATATATGATTGAGAATCCGCG 1571
||| || || || | ||||| | | ||| | || || ||||||||||||
Sbjct 99390 TCGGATAGCTGCGAACATTGGTGAGGAGCTTGGTGTGACTTACATCATTGAGAATCCGGT 99331
Query 1572 CAGTGTGCTTTCCACCCAGTGGCGCAAGCCGGATCACTCGTTCGACCCGTGGGAGTATGG 1631
|| || || || | |||| | || || ||||||| ||| | || |||||||| ||
Sbjct 99330 GAGCGTCCTGTCGTCTGCGTGGAGAAAACCAAATCACTCCTTCAATCCCTGGGAGTACGG 99271
Query 1632 GGGGTATCTGCCGGAGGATGACGTACACCCGCTCTTCCCGGAATACATCAACGCC-CGCG 1690
|| ||||| || |||||||||| ||||| |||||| || || |||| ||||
Sbjct 99270 CGGCTATCTTCCTGAGGATGACGCGCACCCCTGGTTCCCGATGTATAT-TGCGCCGCGCG 99212
Query 1691 ATTCATATCCGAAGCTGACTTGCTTATGGACCGGCAACGGCTTCCGTATGCCAGAGAAGA 1750
|| | || |||||| ||||| | |||||| ||| || ||||| |||| |
Sbjct 99211 ATGCTTACCCGAAGAAAACTTGTCTGTGGACCTCTGACGATTTTGTCATGCCCGAGAGAA 99152
Query 1751 AACCTGT 1757
|||||||
Sbjct 99151 AACCTGT 99145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 140354763138408
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