Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq687 84.2 2e-11
seq59 84.2 2e-11
>seq687
Length=229775
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088
||||| ||||| ||| || || |||||||| ||||| || || | || | ||| ||
Sbjct 53781 CACCAAGTGCAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCAAGTGTCCTTCCATCCTC 53722
Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148
| || ||||||||| | || | ||||||||||||| ||| | ||| || |||||
Sbjct 53721 GAGCTGCTTGCCCGCAAAGATCAACCTTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 53662
Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTT 101206
||||| ||||||| | | || || | || || ||| | |||||| |||
Sbjct 53661 GATTTTGGCCTTCACATTATCAATTGTATC--AGAACTTTCAACTTCCAGGGTAATGGTT 53604
Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|| || ||||| || || | ||| ||||||||
Sbjct 53603 TTCCCAGTCAAGGTCTTCACAAAGATTTGCAT 53572
>seq59
Length=1152742
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088
||||| ||||| ||| || || |||||||| ||||| || || | || | ||| ||
Sbjct 731262 CACCAAGTGCAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCAAGTGTCCTTCCATCCTC 731203
Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148
| || ||||||||| | || | ||||||||||||| ||| | ||| || |||||
Sbjct 731202 GAGCTGCTTGCCCGCAAAGATCAACCTTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 731143
Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTT 101206
||||| ||||||| | | || || | || || ||| | |||||| |||
Sbjct 731142 GATTTTGGCCTTCACATTATCAATTGTATC--AGAACTTTCAACTTCCAGGGTAATGGTT 731085
Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|| || ||||| || || | ||| ||||||||
Sbjct 731084 TTCCCAGTCAAGGTCTTCACAAAGATTTGCAT 731053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409649905839138
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |