Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq687 84.2 2e-11 seq59 84.2 2e-11 >seq687 Length=229775 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||||| ||||| ||| || || |||||||| ||||| || || | || | ||| || Sbjct 53781 CACCAAGTGCAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCAAGTGTCCTTCCATCCTC 53722 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 | || ||||||||| | || | ||||||||||||| ||| | ||| || ||||| Sbjct 53721 GAGCTGCTTGCCCGCAAAGATCAACCTTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 53662 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTT 101206 ||||| ||||||| | | || || | || || ||| | |||||| ||| Sbjct 53661 GATTTTGGCCTTCACATTATCAATTGTATC--AGAACTTTCAACTTCCAGGGTAATGGTT 53604 Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || ||||| || || | ||| |||||||| Sbjct 53603 TTCCCAGTCAAGGTCTTCACAAAGATTTGCAT 53572 >seq59 Length=1152742 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||||| ||||| ||| || || |||||||| ||||| || || | || | ||| || Sbjct 731262 CACCAAGTGCAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCAAGTGTCCTTCCATCCTC 731203 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 | || ||||||||| | || | ||||||||||||| ||| | ||| || ||||| Sbjct 731202 GAGCTGCTTGCCCGCAAAGATCAACCTTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 731143 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTT 101206 ||||| ||||||| | | || || | || || ||| | |||||| ||| Sbjct 731142 GATTTTGGCCTTCACATTATCAATTGTATC--AGAACTTTCAACTTCCAGGGTAATGGTT 731085 Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || ||||| || || | ||| |||||||| Sbjct 731084 TTCCCAGTCAAGGTCTTCACAAAGATTTGCAT 731053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409649905839138