Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq8 150 3e-31 seq129 91.5 2e-13 seq22 91.5 2e-13 >seq8 Length=1797525 Score = 150 bits (166), Expect = 3e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 ||||| ||||| | ||| | |||||| | |||| |||||||||||||||||| |||||| Sbjct 10362 CCTCCTTGATCAACATAACGGGCAGTATCATTAAAAACTCTCAACATTGGAACAATGCCA 10303 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || || || |||||||||||| ||||||||| || ||||| || ||| || || Sbjct 10302 TTGGAGGTTCCATTTGTTCCACGAATATAACTGCCTGTGGCACGGATGTTATGAACTGAG 10243 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || ||| ||| | |||||| |||||| || ||||| ||| Sbjct 10242 ACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACATTCTTTCAAGGTATCATAAATG 10183 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 || || || |||||||| ||||| || ||| || ||||| Sbjct 10182 CCTTCAATGCTATCATCTTTCATGCAAACAAGGAAGCAGCT 10142 Score = 105 bits (116), Expect = 1e-17 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551 ||||||||||||| | || || | | ||||||||| || ||||| ||| |||||| Sbjct 10866 CTCTCTTTCATATCGGGTGTACAGCTGTTCAAATTTCTCACCCCAGCAATCTGACAAACC 10807 Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAA 76611 ||| | ||||| ||||| | ||||||||| ||||| | | ||| | || ||| || Sbjct 10806 TGGAGACTCATTAGGACAAAACAATGACCAACTGCCATCATTTTGAACTCTTTCCATGAA 10747 Query 76612 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662 ||||||||| | ||| || ||| ||| ||||| |||| || ||||||| Sbjct 10746 GAGATCAGGCACCCAAAGTGCATAAAAAAGATCACGGGCTCGGTGTTCTTC 10696 >seq129 Length=826992 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 || ||||||||||| ||||| || ||||||||| || | ||||| || ||||| | | Sbjct 115567 CAAGCAAAATCACAGTGAAGACCCTCATCTCTAGATATAAGCTCGTTTGAGAATGTCAAC 115508 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGC 46727 |||||||||||||| | |||||| ||||| ||||| || Sbjct 115507 CCAGGCATTAGTCCCCTCTTTTTAAGCCAGAATATGGC 115470 >seq22 Length=1467039 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 || ||||||||||| ||||| || ||||||||| || | ||||| || ||||| | | Sbjct 15043 CAAGCAAAATCACAGTGAAGACCCTCATCTCTAGATATAAGCTCGTTTGAGAATGTCAAC 15102 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGC 46727 |||||||||||||| | |||||| ||||| ||||| || Sbjct 15103 CCAGGCATTAGTCCCCTCTTTTTAAGCCAGAATATGGC 15140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712914954714240