Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_031081.1 Length=45206 Score E Sequences producing significant alignments: (Bits) Value seq768 118 3e-22 >seq768 Length=200800 Score = 118 bits (130), Expect = 3e-22 Identities = 253/369 (69%), Gaps = 12/369 (3%) Strand=Plus/Minus Query 6571 GCCAGATATCATCTACGCATTCCCGCCGTGTACTGATCTGGCGGTGAGCGGTGCGCCAG- 6629 ||| ||| |||| || ||||||||||| ||||| ||||| || || ||||| | | Sbjct 200172 GCCGGATTTCATTATGGCCTTCCCGCCGTGCACTGACCTGGCCGTTAGTGGTGCTCGACA 200113 Query 6630 CTTTCCCGCGCAAACGCGCCCGCGACCCGGCCTTCCAGCTTAAGGCGGTGCGCACCGCGA 6689 |||| || |||| || || || ||| |||||| || || || |||||| Sbjct 200112 CTTTGCCA-GCAAGCGTAAACGTGATCCGCTATTCCAGGAGAAAGCTGTTGCCACCGCCC 200054 Query 6690 AGATCGCCGCGTACCTGGGTGACTTCTTCGAAGTGCCGTATATGATTGAGAATCCGCGCA 6749 ||| |||||| || | ||||| | | | ||| | || || |||||||||||| | Sbjct 200053 GGATTGCCGCGAACATCGGTGATAGCCTGGGTGTGACTTACATCATTGAGAATCCGGTTA 199994 Query 6750 GTGTGCTTTC--CACCCAGTGGCGCAAGCCGGATCACTCATTCGACCCGTGGGAGTATGG 6807 | || || || || || ||||| ||| | || ||| | ||| | || ||||||||||| Sbjct 199993 GCGTCCTGTCATCAGCC--TGGCGAAAGGCTGACCACACTTTCAATCCCTGGGAGTATGG 199936 Query 6808 GGGATATCTGCCGGAGGATGACGTACACCCGCTCTTCCCGGAATACATCAACGCC-CGCG 6866 || ||||| || ||| |||||| |||||| |||||| || || |||| |||| Sbjct 199935 CGGCTATCTTCCTGAGAATGACGCACACCCCTGGTTCCCGATGTATAT-TGCGCCGCGCG 199877 Query 6867 ATTCATATCCGAAGCTGACCTGCTTATGGAC--CGGCAACGGCTTCCGTATGCCAGAGAA 6924 || | || |||||| || || | ||||| ||| ||| ||| |||||||| | Sbjct 199876 ATGCTTACCCGAAGAAAACTTGTCTTTGGACTTCGG--ACGACTTTGTCATGCCAGAAAG 199819 Query 6925 GAGACCTGT 6933 || ||||| Sbjct 199818 GAAGCCTGT 199810 Score = 96.9 bits (106), Expect = 1e-15 Identities = 214/315 (68%), Gaps = 6/315 (2%) Strand=Plus/Minus Query 6587 GCATTCCCGCCGTGTACTGATCTGGCGGTGAGCGGTGCGC--CAGCTTTCCCGCGCAAAC 6644 || ||||| || || ||||| ||||| || || ||||| | || |||| || | || | Sbjct 49155 GCTTTCCCTCCATGCACTGACCTGGCTGTTAGTGGTGCTCGTCA-CTTTGCCA-GTAAGC 49098 Query 6645 GCGCCCGCGACCCGGCCTTCCAGCTTAAGGCGGTGCGCACCGCGAAGATCGCCGCGTACC 6704 | | || || ||| |||||| ||||| || |||||| ||| || ||| || Sbjct 49097 GTGAACGTGATCCGTTATTCCAGGAGAAGGCTGTTGCCACCGCTCGGATAGCTGCGAACA 49038 Query 6705 TGGGTGACTTCTTCGAAGTGCCGTATATGATTGAGAATCCGCGCAGTGTGCTTTCCACCC 6764 | ||||| | | ||| | || || |||||||||||| || || || || | Sbjct 49037 TTGGTGAGGAGCTTGGTGTGACTTACATCATTGAGAATCCGGTGAGCGTCCTGTCGTCTG 48978 Query 6765 AGTGGCGCAAGCCGGATCACTCATTCGACCCGTGGGAGTATGGGGGATATCTGCCGGAGG 6824 |||| | || || ||||||| ||| | || |||||||| || || ||||| || |||| Sbjct 48977 CGTGGAGAAAACCAAATCACTCCTTCAATCCCTGGGAGTACGGCGGCTATCTTCCTGAGG 48918 Query 6825 ATGACGTACACCCGCTCTTCCCGGAATACATCAACGCC-CGCGATTCATATCCGAAGCTG 6883 |||||| ||||| |||||| || || |||| |||||| | || |||||| Sbjct 48917 ATGACGCGCACCCCTGGTTCCCGATGTATAT-TGCGCCGCGCGATGCTTACCCGAAGAAA 48859 Query 6884 ACCTGCTTATGGACC 6898 || || | |||||| Sbjct 48858 ACTTGTCTGTGGACC 48844 Score = 96.9 bits (106), Expect = 1e-15 Identities = 214/315 (68%), Gaps = 6/315 (2%) Strand=Plus/Minus Query 6587 GCATTCCCGCCGTGTACTGATCTGGCGGTGAGCGGTGCGC--CAGCTTTCCCGCGCAAAC 6644 || ||||| || || ||||| ||||| || || ||||| | || |||| || | || | Sbjct 99491 GCTTTCCCTCCATGCACTGACCTGGCTGTTAGTGGTGCTCGTCA-CTTTGCCA-GTAAGC 99434 Query 6645 GCGCCCGCGACCCGGCCTTCCAGCTTAAGGCGGTGCGCACCGCGAAGATCGCCGCGTACC 6704 | | || || ||| |||||| ||||| || |||||| ||| || ||| || Sbjct 99433 GTGAACGTGATCCGTTATTCCAGGAGAAGGCTGTTGCCACCGCTCGGATAGCTGCGAACA 99374 Query 6705 TGGGTGACTTCTTCGAAGTGCCGTATATGATTGAGAATCCGCGCAGTGTGCTTTCCACCC 6764 | ||||| | | ||| | || || |||||||||||| || || || || | Sbjct 99373 TTGGTGAGGAGCTTGGTGTGACTTACATCATTGAGAATCCGGTGAGCGTCCTGTCGTCTG 99314 Query 6765 AGTGGCGCAAGCCGGATCACTCATTCGACCCGTGGGAGTATGGGGGATATCTGCCGGAGG 6824 |||| | || || ||||||| ||| | || |||||||| || || ||||| || |||| Sbjct 99313 CGTGGAGAAAACCAAATCACTCCTTCAATCCCTGGGAGTACGGCGGCTATCTTCCTGAGG 99254 Query 6825 ATGACGTACACCCGCTCTTCCCGGAATACATCAACGCC-CGCGATTCATATCCGAAGCTG 6883 |||||| ||||| |||||| || || |||| |||||| | || |||||| Sbjct 99253 ATGACGCGCACCCCTGGTTCCCGATGTATAT-TGCGCCGCGCGATGCTTACCCGAAGAAA 99195 Query 6884 ACCTGCTTATGGACC 6898 || || | |||||| Sbjct 99194 ACTTGTCTGTGGACC 99180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144533854850112