Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_031113.1 Length=44513 Score E Sequences producing significant alignments: (Bits) Value seq768 118 3e-22 >seq768 Length=200800 Score = 118 bits (130), Expect = 3e-22 Identities = 253/369 (69%), Gaps = 12/369 (3%) Strand=Plus/Plus Query 3137 ACAGGTCTCTTCTCTGGCATACGGAAGCCGTTGCCG--GTCCATAAGCAGGTCAGCTTCG 3194 ||||| || | |||||||| ||| ||| ||| ||||| | || || ||||| Sbjct 199810 ACAGGCTTCCTTTCTGGCATGACAAAGTCGT--CCGAAGTCCAAAGACAAGTTTTCTTCG 199867 Query 3195 GATATGAATCGCG-GGCGTTGATGTATTCCGGGAAGAGCGGGTGTACGTCATCCTCCGGC 3253 | || | |||||| |||| || || |||||| |||||| |||||| ||| || Sbjct 199868 GGTAAGCATCGCGCGGCGCA-ATATACATCGGGAACCAGGGGTGTGCGTCATTCTCAGGA 199926 Query 3254 AGATATCCCCCATACTCCCACGGGTCGAATGAGTGATCCGGCTTGCGCCACTGGGTG--G 3311 ||||| || ||||||||||| || | ||| | ||| || | ||| ||||| || || | Sbjct 199927 AGATAGCCGCCATACTCCCAGGGATTGAAAGTGTGGTCAGCCTTTCGCCA--GGCTGATG 199984 Query 3312 AAAGCACACTGCGCGGATTCTCAATCATATACGGCACTTCGAAGAAGTCACCCAGGTACG 3371 | || || || |||||||||||| || || | ||| | | | ||||| | || || Sbjct 199985 ACAGGACGCTAACCGGATTCTCAATGATGTAAGTCACACCCAGGCTATCACCGATGTTCG 200044 Query 3372 CGGCGATCTTCGCGGTGCGCACCGCCTTAAGCTGGAAGGCCGGGTCGCGGGCGCGTTTGC 3431 |||| ||| |||||| || || || |||||| ||| || || || |||| Sbjct 200045 CGGCAATCCGGGCGGTGGCAACAGCTTTCTCCTGGAATAGCGGATCACGTTTACGCTTGC 200104 Query 3432 GCGGGAAAG-CTGGCGCACCGCTCACCGCCAGATCAGTACACGGCGGGAATGCGTAGATG 3490 || |||| | | ||||| || || ||||| ||||| ||||||||||| || ||| Sbjct 200105 -TGGCAAAGTGTCGAGCACCACTAACGGCCAGGTCAGTGCACGGCGGGAAGGCCATAATG 200163 Query 3491 ATATCTGGC 3499 | ||| ||| Sbjct 200164 AAATCCGGC 200172 Score = 96.9 bits (106), Expect = 1e-15 Identities = 214/315 (68%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 3172 GGTCCATAAGCAGGTCAGCTTCGGATATGAATCGCG-GGCGTTGATGTATTCCGGGAAGA 3230 |||||| | || || |||||| || | |||||| |||| || || |||||| Sbjct 48844 GGTCCACAGACAAGTTTTCTTCGGGTAAGCATCGCGCGGCGCA-ATATACATCGGGAACC 48902 Query 3231 GCGGGTGTACGTCATCCTCCGGCAGATATCCCCCATACTCCCACGGGTCGAATGAGTGAT 3290 ||||| |||||||||| || ||||| || || |||||||| || | ||| ||||||| Sbjct 48903 AGGGGTGCGCGTCATCCTCAGGAAGATAGCCGCCGTACTCCCAGGGATTGAAGGAGTGAT 48962 Query 3291 CCGGCTTGCGCCACTGGGTGGAAAGCACACTGCGCGGATTCTCAATCATATACGGCACTT 3350 || || | |||| | || || || || |||||||||||| || || | ||| Sbjct 48963 TTGGTTTTCTCCACGCAGACGACAGGACGCTCACCGGATTCTCAATGATGTAAGTCACAC 49022 Query 3351 CGAAGAAGTCACCCAGGTACGCGGCGATCTTCGCGGTGCGCACCGCCTTAAGCTGGAAGG 3410 | | ||||| | || ||| || ||| |||||| || ||||| |||||| Sbjct 49023 CAAGCTCCTCACCAATGTTCGCAGCTATCCGAGCGGTGGCAACAGCCTTCTCCTGGAATA 49082 Query 3411 CCGGGTCGCGGGCGCGTTTGCGCGGGAAAGCTG--GCGCACCGCTCACCGCCAGATCAGT 3468 ||| || || | || || | || |||| || | ||||| || || ||||| ||||| Sbjct 49083 ACGGATCACGTTCACGCTTAC-TGGCAAAG-TGACGAGCACCACTAACAGCCAGGTCAGT 49140 Query 3469 ACACGGCGGGAATGC 3483 || || ||||| || Sbjct 49141 GCATGGAGGGAAAGC 49155 Score = 96.9 bits (106), Expect = 1e-15 Identities = 214/315 (68%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 3172 GGTCCATAAGCAGGTCAGCTTCGGATATGAATCGCG-GGCGTTGATGTATTCCGGGAAGA 3230 |||||| | || || |||||| || | |||||| |||| || || |||||| Sbjct 99180 GGTCCACAGACAAGTTTTCTTCGGGTAAGCATCGCGCGGCGCA-ATATACATCGGGAACC 99238 Query 3231 GCGGGTGTACGTCATCCTCCGGCAGATATCCCCCATACTCCCACGGGTCGAATGAGTGAT 3290 ||||| |||||||||| || ||||| || || |||||||| || | ||| ||||||| Sbjct 99239 AGGGGTGCGCGTCATCCTCAGGAAGATAGCCGCCGTACTCCCAGGGATTGAAGGAGTGAT 99298 Query 3291 CCGGCTTGCGCCACTGGGTGGAAAGCACACTGCGCGGATTCTCAATCATATACGGCACTT 3350 || || | |||| | || || || || |||||||||||| || || | ||| Sbjct 99299 TTGGTTTTCTCCACGCAGACGACAGGACGCTCACCGGATTCTCAATGATGTAAGTCACAC 99358 Query 3351 CGAAGAAGTCACCCAGGTACGCGGCGATCTTCGCGGTGCGCACCGCCTTAAGCTGGAAGG 3410 | | ||||| | || ||| || ||| |||||| || ||||| |||||| Sbjct 99359 CAAGCTCCTCACCAATGTTCGCAGCTATCCGAGCGGTGGCAACAGCCTTCTCCTGGAATA 99418 Query 3411 CCGGGTCGCGGGCGCGTTTGCGCGGGAAAGCTG--GCGCACCGCTCACCGCCAGATCAGT 3468 ||| || || | || || | || |||| || | ||||| || || ||||| ||||| Sbjct 99419 ACGGATCACGTTCACGCTTAC-TGGCAAAG-TGACGAGCACCACTAACAGCCAGGTCAGT 99476 Query 3469 ACACGGCGGGAATGC 3483 || || ||||| || Sbjct 99477 GCATGGAGGGAAAGC 99491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142316312310900