Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq222 98.7 1e-15 >seq222 Length=596275 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 164555 GAGACCACCGAAAATGAGTCCCAGAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACC 164614 || ||||| |||||||| || || | |||||||| ||||| || || ||| ||||| Sbjct 106769 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 106828 Query 164615 TACAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTC 164674 ||||| ||||| || | ||| ||||| ||||| | |||| || ||||| ||| ||| Sbjct 106829 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 106888 Query 164675 AACAACTCCCGTTCGCTGCACTTCTTCCTCGC 164706 || || | ||||| | ||||||||||| || Sbjct 106889 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 106920 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 164555 GAGACCACCGAAAATGAGTCCCAGAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACC 164614 || ||||| |||||||| || || | |||||||| ||||| || || ||| ||||| Sbjct 179842 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 179783 Query 164615 TACAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTC 164674 ||||| ||||| || | ||| ||||| ||||| | |||| || ||||| ||| ||| Sbjct 179782 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 179723 Query 164675 AACAACTCCCGTTCGCTGCACTTCTTCCTCGC 164706 || || | ||||| | ||||||||||| || Sbjct 179722 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 179691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557639189976240