Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq157 98.7 1e-15 seq222 89.7 6e-13 >seq157 Length=750868 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 171042 CAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTC 171101 ||||| ||||||||||| | || ||||| || ||||| || || | ||| | | Sbjct 399153 CAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTTT 399212 Query 171102 TTCCTGC-AAGGTTTCCACAACTGGACACTGAATCCATTTCATATGATGGG---TGTTGC 171157 || | | |||| || || || || ||| |||| |||||||||||||||| ||||| Sbjct 399213 TTTTTTCCAAGGGTTTCATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTTGA 399272 Query 171158 AG-GTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACTT 171216 || ||| |||| ||| || | | || |||||||||| ||| ||||| |||||| Sbjct 399273 AGTGTA----GGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACTT 399328 Query 171217 TGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACGACTCA 171268 | | ||||||| ||||| ||||| || || | || ||| || | ||||| Sbjct 399329 TATTTGAAGATAGTGATGGTGCAAATACATTCCATGC-TTTAACCCAACTCA 399379 >seq222 Length=596275 Score = 89.7 bits (98), Expect = 6e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 169979 GAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 170038 |||||||| || || || || || | |||||||| || || ||||| ||| | ||| Sbjct 106769 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 106828 Query 170039 TACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 170098 ||||| ||||| || | ||| ||||| || || | ||||||| ||||| ||| ||| Sbjct 106829 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 106888 Query 170099 AACAACTCCCGTTCACTGCACTTCTTCCTCGC 170130 || || | ||||| | ||||||||||| || Sbjct 106889 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 106920 Score = 89.7 bits (98), Expect = 6e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 169979 GAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 170038 |||||||| || || || || || | |||||||| || || ||||| ||| | ||| Sbjct 179842 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 179783 Query 170039 TACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 170098 ||||| ||||| || | ||| ||||| || || | ||||||| ||||| ||| ||| Sbjct 179782 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 179723 Query 170099 AACAACTCCCGTTCACTGCACTTCTTCCTCGC 170130 || || | ||||| | ||||||||||| || Sbjct 179722 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 179691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592182247788640