Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_031944.1
Length=185102
Score E
Sequences producing significant alignments: (Bits) Value
seq157 98.7 1e-15
seq222 89.7 6e-13
>seq157
Length=750868
Score = 98.7 bits (108), Expect = 1e-15
Identities = 164/232 (71%), Gaps = 10/232 (4%)
Strand=Plus/Plus
Query 171042 CAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTC 171101
||||| ||||||||||| | || ||||| || ||||| || || | ||| | |
Sbjct 399153 CAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTTT 399212
Query 171102 TTCCTGC-AAGGTTTCCACAACTGGACACTGAATCCATTTCATATGATGGG---TGTTGC 171157
|| | | |||| || || || || ||| |||| |||||||||||||||| |||||
Sbjct 399213 TTTTTTCCAAGGGTTTCATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTTGA 399272
Query 171158 AG-GTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACTT 171216
|| ||| |||| ||| || | | || |||||||||| ||| ||||| ||||||
Sbjct 399273 AGTGTA----GGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACTT 399328
Query 171217 TGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACGACTCA 171268
| | ||||||| ||||| ||||| || || | || ||| || | |||||
Sbjct 399329 TATTTGAAGATAGTGATGGTGCAAATACATTCCATGC-TTTAACCCAACTCA 399379
>seq222
Length=596275
Score = 89.7 bits (98), Expect = 6e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 169979 GAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 170038
|||||||| || || || || || | |||||||| || || ||||| ||| | |||
Sbjct 106769 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 106828
Query 170039 TACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 170098
||||| ||||| || | ||| ||||| || || | ||||||| ||||| ||| |||
Sbjct 106829 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 106888
Query 170099 AACAACTCCCGTTCACTGCACTTCTTCCTCGC 170130
|| || | ||||| | ||||||||||| ||
Sbjct 106889 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 106920
Score = 89.7 bits (98), Expect = 6e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 169979 GAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 170038
|||||||| || || || || || | |||||||| || || ||||| ||| | |||
Sbjct 179842 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 179783
Query 170039 TACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 170098
||||| ||||| || | ||| ||||| || || | ||||||| ||||| ||| |||
Sbjct 179782 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 179723
Query 170099 AACAACTCCCGTTCACTGCACTTCTTCCTCGC 170130
|| || | ||||| | ||||||||||| ||
Sbjct 179722 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 179691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592182247788640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |