Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Quercus_20lobata_20[genbank_20GCA_5F001633185.1_202016-04-28]
40,156 sequences; 759,241,194 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq762 163 2e-35
seq2326 132 4e-26
seq2332 131 1e-25
seq5335 123 2e-23
seq5462 109 5e-19
seq3733 105 6e-18
seq6693 95.1 1e-14
>seq762
Length=331234
Score = 163 bits (180), Expect = 2e-35
Identities = 178/234 (76%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| ||||| |||||||||||| |||| || | ||||| ||| ||
Sbjct 316908 AATGCAAATTTTTGTGAAGACCTTGACCGGTAAAACCATTACTTTGGAAGTTGAGAGCTC 316967
Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
|||||| ||||| |||| |||| |||| ||| ||||| || || || ||||| |
Sbjct 316968 TGACACCATCGATAATGTCA---AAGCCAAAATTCAA-GACAAGGAGGGCATCCCACCAG 317023
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
|||| ||| || | || ||||||||||| || | ||||||| ||| || | | ||| |
Sbjct 317024 ACCAGCAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGGACCCTAGCCGACT 317083
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||||| ||||| |||||||| || || | ||||| |||| ||||| ||||
Sbjct 317084 ACAATATCCAAAAGGAATCCACCCTCCACCTGGTGCTCCGGCTTAGAGGTGGAA 317137
Score = 116 bits (128), Expect = 3e-21
Identities = 157/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| ||||| ||||| || ||| | || || | || || ||| ||
Sbjct 317136 AATGCAAATTTTTGTTAAGACCTTGACTGGCAAAACAATTACTTTGGAGGTTGAGAGTTC 317195
Query 25058 TGACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| |||||||| | | | |||| || | || ||||| || || || ||||| |||
Sbjct 317196 AGATACTATCGA-TAATGTTAAAGCTAAGATCCAA-GACAAGGAGGGTATCCCACCGGAC 317253
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||| || | |||||||| ||||| || || ||||||| | || | | ||||||
Sbjct 317254 CAACAGAGGCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGAAGGACCTTAGCTGATTAC 317313
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||||||||| || || || || || || |||||
Sbjct 317314 AATATTCAAAAGGAGTCAACCCTGCACTTGGTGCT 317348
Score = 116 bits (128), Expect = 3e-21
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| |||||||| |||||||||||||| ||| |||| || | || || || ||
Sbjct 317364 AATGCAGATATTTGTGAAGACTTTGACCGGAAAAACCATAACCTTGGAGGTTGAAAGCTC 317423
Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || || || ||| || || ||||| ||||| || ||||| |||
Sbjct 317424 AGACACTATTGA--CAATGTCAAGGCTAAGATACAGGACAAGGAAGGTATCCCACCAGAC 317481
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || |||| ||||| || || ||| | ||||||| | ||| | | ||||||
Sbjct 317482 CAACAAAGGCTTATCTTTGCAGGAAAGCAACTTGAAGATGGAAGGACTCTTGCAGATTAC 317541
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || || || || || || ||| | |||||
Sbjct 317542 AATATCCAGAAGGAGTCTACCCTTCATCTGGTGCT 317576
Score = 114 bits (126), Expect = 1e-20
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| ||||| ||||| || || |||| || | || || ||| ||
Sbjct 317592 AATGCAGATTTTTGTTAAGACCTTGACAGGGAAGACCATTACTTTGGAGGTTGAGAGTTC 317651
Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || || |||| ||||| | ||| ||||| || || ||||| || ||||
Sbjct 317652 TGATACAATTGATAATGTGAAAGCAAAGATTCAG-GACAAGGAGGGAATTCCCCCAGACC 317710
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || |||||||||| |||||||| | ||||||| | ||| ||| |||||||
Sbjct 317711 AGCAGAGGCTTATTTTTGCAGGCAAACAGCTTGAAGATGGAAGGACTCTGGCTGATTACA 317770
Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201
|||| ||||| || || || || ||
Sbjct 317771 ATATCCAAAAGGAGTCTACTCTGCA 317795
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || ||||||||||| || ||| |||| || | || || || ||
Sbjct 300922 AATGCAAATTTTCGTGAAGACTTTGACTGGGAAAACCATAACCTTGGAGGTTGAAAGCTC 300981
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| ||||| || ||||| ||| || ||||| ||||| || ||||| |||||
Sbjct 300982 AGATACTATTGACAATGTGAAGGCAAAGATACAAGACAAGGAAGGTATCCCACCAGACCA 301041
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| || |||| ||||| ||||| || | ||||||| | ||| | | ||||||||
Sbjct 301042 GCAAAGGCTTATATTTGCAGGCAAGCAGCTTGAAGATGGAAGGACTCTTGCAGATTACAA 301101
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| || || || || || || ||| | |||||
Sbjct 301102 TATCCAGAAGGAGTCTACCCTTCATCTGGTGCT 301134
Score = 102 bits (112), Expect = 7e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| ||||| ||||| || || |||| || | || || || ||
Sbjct 301150 AATGCAGATTTTTGTTAAGACCTTGACTGGGAAGACCATAACCCTGGAGGTTGAAAGTTC 301209
Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || || |||| ||||| | ||| ||||| || || ||||| || || |
Sbjct 301210 TGATACAATTGATAATGTGAAAGCAAAGATTCAG-GACAAGGAGGGAATTCCTCCAGATC 301268
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || |||||||||| |||||||| | ||||||| | || ||| |||||||
Sbjct 301269 AGCAGAGGCTTATTTTTGCAGGCAAACAGCTTGAAGATGGAAGGACCCTGGCTGATTACA 301328
Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201
|||| ||||| || || || || ||
Sbjct 301329 ATATCCAAAAGGAGTCTACTCTGCA 301353
Score = 100 bits (110), Expect = 2e-16
Identities = 163/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || | || || || |||| || | ||||| || ||
Sbjct 300467 ATGCAAATCTTTGTTAAAACCCTTACTGGGAAGACCATAACTTTGGAAGTTGAAAGCTCA 300526
Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || | | | |||| || | || ||||| || || || ||||| ||||
Sbjct 300527 GACACCATAGA-TAATGTTAAAGCTAAGATCCAA-GACAAGGAGGGTATCCCACCAGACC 300584
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | || ||||||||||| || | ||||||| |||||| | | || ||||
Sbjct 300585 AGCAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACCCTCGCAGACTACA 300644
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
| || ||||| || ||||| || || | ||||| |||| ||||| ||||
Sbjct 300645 ACATCCAAAAGGAGTCCACCCTCCACCTGGTGCTCCGGCTCAGAGGTGGAA 300695
>seq2326
Length=95029
Score = 132 bits (146), Expect = 4e-26
Identities = 164/221 (74%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 24992 CGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGA 25051
|||| |||||| || ||||| |||||| |||| || || ||||||| | || |||||
Sbjct 85235 CGGAGGAATGCAGATTTTTGTTAAGACTCTGACTGGGAAGACCATCACCCTTGAGGTGGA 85294
Query 25052 GTCGTCTGACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCA 25109
| ||||| || || || | | | ||||||| | ||| || || |||||||||||
Sbjct 85295 GAGCTCTGATACCATAGA-TAATGTTAAAGCAAAGATTCAA-GATAAGGAAGGGATTCCT 85352
Query 25110 CCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGC 25169
|| || || ||| || | || ||||| || |||||| | || |||| ||||||| |||
Sbjct 85353 CCAGATCAGCAGAGGCTCATCTTTGCTGGAAAACAACTTGAGGATGGTCGCACTCTGGCT 85412
Query 25170 GATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||||||||||| || ||||| || || ||| | || ||
Sbjct 85413 GATTACAATATTCAGAAGGAATCAACACTCCATCTTGTTCT 85453
Score = 129 bits (142), Expect = 5e-25
Identities = 170/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| |||||||||||| | || || || | || || | || || ||| ||
Sbjct 85013 AATGCAAATCTTTGTAAAGACTCTTACTGGCAAGACTATTACTCTTGAGGTTGAGAGCTC 85072
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||| ||||| || || || | ||||||| ||| || |||||||| |||||||| ||
Sbjct 85073 TGATACTATTGA--CAATGTTAAGGCAAAAATTCA-GGATAAAGAAGGTATTCCACCAGA 85129
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||||| || | || || || || ||||| | ||||||| | ||| ||| || ||
Sbjct 85130 CCAACAGAGGCTGATATTCGCTGGAAAACAGCTTGAAGATGGCAGGACTTTGGCTGACTA 85189
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|| ||||| ||||| || || || ||||| || || ||||| | |||||||
Sbjct 85190 TAACATTCAGAAAGAGTCTACTCTTCATTTGGTTCTCAGGCTTCGCGGAGGAA 85242
Score = 122 bits (134), Expect = 8e-23
Identities = 158/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || ||| | || || || |||| || | || || ||| |||
Sbjct 84330 ATGCAGATCTTTGTCAAAACTCTCACTGGAAAGACCATAACTCTTGAGGTCGAGAGCTCT 84389
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || ||||| |||| ||||||||| || ||||| || || || ||||| ||
Sbjct 84390 GATACAATCGATAATGTCA---AAGCAAAAATACAG-GACAAGGAGGGAATCCCACCAGA 84445
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| ||| || | || ||||| |||||||| || || |||| ||| ||| ||| |||||
Sbjct 84446 CCAGCAGAGGCTGATCTTTGCTGGCAAACAGTTGGAGGATGGTCGTACTTTGGCTGATTA 84505
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| || || ||||||||||| || || ||||| ||
Sbjct 84506 CAACATCCAGAAAGAATCCACCCTCCACTTAGTTCT 84541
Score = 102 bits (112), Expect = 7e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| |||| || || | |||||| | || |||||| ||
Sbjct 85470 ATGCAGATCTTTGTGAAGACACTGACGGGCAAGACAATCACACTTGAGGTGGAGAGTTCC 85529
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || ||||| |||| | ||| ||||| || ||||| |||||||| ||
Sbjct 85530 GATACCATTGATAATGTGAAGGCAAAGATTCAG-GACAAGGAGGGGATCCCACCTGATCA 85588
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || ||||| || || || | || |||| |||||| | | || |||||
Sbjct 85589 GCAGAGGCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTCGCACACTTGCTGACTACAA 85648
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||| || ||||| || || ||| | || ||
Sbjct 85649 TATTCAGAAGGAATCAACCCTCCATCTTGTTCT 85681
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | ||||| || |||| || | ||||| ||| |||
Sbjct 84558 ATGCAGATTTTCGTCAAGACACTCACCGGAAAGACCATTACTCTTGAAGTTGAGAGTTCT 84617
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || ||||| | |||| ||| ||||||||||| ||||| || || ||
Sbjct 84618 GATACAATAGATAATGTGAAGGCTAAAATTCAG-GACAAAGAAGGAATTCCCCCAGATCA 84676
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | ||||| || || || || | || |||| || ||| ||| |||||||||
Sbjct 84677 GCAGAGGCTGATTTTCGCTGGAAAGCAGCTTGAGGATGGCCGAACTTTGGCCGATTACAA 84736
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||| || ||||| || || ||
Sbjct 84737 CATTCAGAAGGAATCTACACTCCA 84760
>seq2332
Length=86198
Score = 131 bits (144), Expect = 1e-25
Identities = 160/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| |||||| |||| || || ||||||| | || |||||| ||
Sbjct 74686 AATGCAGATTTTTGTTAAGACTCTGACTGGGAAGACCATCACCCTTGAGGTGGAGAGCTC 74745
Query 25058 TGACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||| || || || | | | ||||||| | ||| || || ||||||||||| || ||
Sbjct 74746 TGATACCATAGA-TAATGTTAAAGCAAAGATTCAA-GATAAGGAAGGGATTCCTCCGGAT 74803
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||| || | || ||||| || |||||| | || |||| ||||||| ||| ||||||
Sbjct 74804 CAGCAGAGGCTCATCTTTGCTGGAAAACAACTTGAGGATGGTCGCACTCTGGCTGATTAC 74863
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||||| || ||||| || || ||| | || ||
Sbjct 74864 AATATTCAGAAGGAATCAACACTCCATCTTGTTCT 74898
Score = 129 bits (142), Expect = 5e-25
Identities = 170/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| |||||||||||| | || || || | || || | || || ||| ||
Sbjct 74458 AATGCAAATCTTTGTAAAGACTCTTACTGGCAAGACTATTACTCTTGAGGTCGAGAGCTC 74517
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||| ||||| || || || | ||||||| ||| || |||||||| |||||||| ||
Sbjct 74518 TGATACTATTGA--CAATGTTAAGGCAAAAATTCA-GGATAAAGAAGGTATTCCACCAGA 74574
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||||| || | || || || || ||||| | ||||||| | ||| ||| || ||
Sbjct 74575 CCAACAGAGGCTGATATTCGCTGGAAAACAGCTTGAAGATGGCAGGACTTTGGCTGACTA 74634
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|| ||||| ||||| || || || ||||| || || ||||| | |||||||
Sbjct 74635 TAACATTCAGAAAGAGTCTACTCTTCATTTGGTTCTCAGGCTTCGTGGAGGAA 74687
Score = 127 bits (140), Expect = 2e-24
Identities = 159/216 (74%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || ||| | || || || |||| || |||| || ||| |||
Sbjct 73775 ATGCAGATCTTTGTCAAAACTCTCACTGGAAAGACCATAACTCTCGAGGTCGAGAGCTCT 73834
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || || || |||| ||||||||| ||| ||||| || || || ||||| ||
Sbjct 73835 GATACAATTGATAATGTCA---AAGCAAAAATTCAG-GACAAGGAGGGAATCCCACCAGA 73890
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| ||| || | || ||||| |||||||| || || |||| ||| ||| ||| |||||
Sbjct 73891 CCAGCAGAGGCTGATCTTTGCTGGCAAACAGTTGGAGGATGGTCGTACTTTGGCTGATTA 73950
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| || || ||||||||||| || || ||||| ||
Sbjct 73951 CAACATCCAGAAAGAATCCACCCTCCACTTAGTTCT 73986
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| |||| || || | |||||| | || |||||| |||
Sbjct 74915 ATGCAGATCTTTGTGAAGACACTGACGGGCAAGACAATCACACTTGAGGTGGAGAGTTCT 74974
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || ||||| |||| | ||| ||||| || ||||| |||||||| ||
Sbjct 74975 GATACCATTGATAATGTGAAGGCAAAGATTCAG-GACAAGGAGGGGATCCCACCTGATCA 75033
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || ||||| || || || | || |||| |||||| | | || |||||
Sbjct 75034 GCAGAGGCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTCGCACACTTGCTGACTACAA 75093
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||| || ||||| || || ||| | || ||
Sbjct 75094 TATTCAGAAGGAATCAACCCTCCATCTTGTTCT 75126
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | ||||| || |||| || | ||||| ||| |||
Sbjct 74003 ATGCAGATTTTCGTCAAGACACTCACCGGAAAGACCATTACTCTTGAAGTTGAGAGTTCT 74062
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || ||||| | |||| ||| ||||||||||| ||||| || || ||
Sbjct 74063 GATACAATAGATAATGTGAAGGCTAAAATTCAG-GACAAAGAAGGAATTCCCCCAGATCA 74121
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | ||||| || || || || | || |||| || ||| ||| |||||||||
Sbjct 74122 GCAGAGGCTGATTTTCGCTGGAAAGCAGCTTGAGGATGGCCGAACTTTGGCCGATTACAA 74181
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||| || ||||| || || ||
Sbjct 74182 CATTCAGAAGGAATCTACACTCCA 74205
>seq5335
Length=19063
Score = 123 bits (136), Expect = 2e-23
Identities = 158/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| |||| || || ||||||| | || |||||| |||
Sbjct 7742 ATGCAGATTTTTGTGAAGACTCTGACAGGAAAGACCATCACCCTTGAGGTGGAGAGTTCT 7683
Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| || || || | | | ||||||| | ||| ||||| ||||||||||| || || |
Sbjct 7682 GATACCATTGA-TAATGTTAAAGCAAAGATTCAA-GACAAGGAAGGGATTCCTCCAGATC 7625
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || |||| ||||| || || ||| | || |||| |||||| | | |||||||
Sbjct 7624 AGCAGAGGCTTATCTTTGCAGGGAAGCAACTCGAGGATGGCCGCACTCTTGCTGATTACA 7565
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||||| || ||||| || || ||| | || ||
Sbjct 7564 ATATTCAGAAGGAATCAACTCTCCATCTTGTCCT 7531
Score = 120 bits (132), Expect = 3e-22
Identities = 167/232 (72%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||||||||| | || || || | || || |||| || ||| ||
Sbjct 7971 AATGCAAATCTTTGTAAAGACCCTCACTGGCAAGACTATTACTCTCGAGGTTGAGAGCTC 7912
Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
||| || || || |||| ||||||||| ||| || || ||||| |||||||| |
Sbjct 7911 TGATACAATTGACAACGTCA---AAGCAAAAATTCA-GGATAAGGAAGGTATTCCACCGG 7856
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
|||||||| || |||| || || || ||||| | || || | | ||| ||| || |
Sbjct 7855 ACCAACAGAGGCTTATATTCGCTGGAAAACAGCTGGAGGAGGGCAGGACTTTGGCTGACT 7796
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| ||||| || ||||| || || || ||||| || |||||||| | |||||
Sbjct 7795 ATAATATCCAGAAAGAGTCTACTCTTCATTTGGTTCTAAGGCTTCGTGGAGG 7744
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || |||| || | ||||| ||| |||
Sbjct 8426 ATGCAGATTTTCGTCAAGACACTCACTGGGAAGACCATAACTCTTGAAGTTGAGAGTTCT 8367
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || ||||| | |||| ||| ||||||||||| ||||| || || ||
Sbjct 8366 GATACCATAGATAATGTGAAGGCGAAAATTCAG-GACAAAGAAGGCATTCCCCCAGATCA 8308
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | |||||||| || || ||| | || |||| || ||| ||| |||||| ||
Sbjct 8307 GCAGAGGTTGATTTTTGCTGGAAAGCAACTCGAGGATGGCCGAACTTTGGCCGATTATAA 8248
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||| || || || || || ||
Sbjct 8247 CATTCAGAAGGAGTCTACACTCCA 8224
>seq5462
Length=105758
Score = 109 bits (120), Expect = 5e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || ||||||| || | ||||| | || |||||| ||
Sbjct 6550 ATGCAGATCTTCGTCAAAACCCTGACCGGCAAGACGATCACGTTGGAGGTGGAGAGCTCC 6609
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| ||||| | || | ||| ||||| ||||||||||| || |||||
Sbjct 6610 GACACCATCGACAACGTGAAGGCCAAGATTCAG-GACAAGGAAGGGATTCCGCCGGACCA 6668
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || || ||||| || ||||| || || | || || | | |||||||||
Sbjct 6669 GCAGAGGCTCATCTTCGCCGGGAAGCAATTGGAGGAAGGCCGTACACTTGCCGATTACAA 6728
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
||| || ||||| || ||||| || | ||| | |||||
Sbjct 6729 TATCCAGAAAGAGTCTACGCTCCACCTTGTGTTGAGGCT 6767
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || ||| ||||||| || ||||||| | || |||||| ||
Sbjct 6322 ATGCAGATCTTCGTGAAAACTCTGACCGGCAAGACCATCACCTTGGAGGTGGAGAGCTCC 6381
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| ||||| || ||| ||||| ||||| || || || || ||
Sbjct 6382 GACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCCGATCAG 6441
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || ||||| || || || ||||| | || ||| | | ||| ||||||
Sbjct 6442 CAGCGATTGATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTCTCGCCGACTACAAT 6501
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
||||| ||||| ||||| || ||
Sbjct 6502 ATTCAGAAAGAGTCCACTCTTCA 6524
>seq3733
Length=159728
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || ||| ||||||| || ||||||| | || |||||| ||
Sbjct 153801 ATGCAGATCTTCGTGAAAACTCTGACCGGCAAGACCATCACCTTGGAGGTGGAGAGCTCC 153742
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| ||||| || ||| ||||| ||||| || || || || ||
Sbjct 153741 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCGCCCGATCAG 153682
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || ||||| || || || ||||| | || ||| | | ||| ||||||
Sbjct 153681 CAGCGATTGATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTCTCGCCGACTACAAT 153622
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
||||| ||||| ||||| || ||
Sbjct 153621 ATTCAGAAAGAGTCCACTCTTCA 153599
Score = 104 bits (114), Expect = 2e-17
Identities = 157/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || | ||||| || | ||||| | || ||||| ||
Sbjct 153573 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATCACGTTGGAGGTGGAAAGCTCC 153514
Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| | || | | || || | ||| ||||| ||||||||||| || ||||
Sbjct 153513 GACACCATCGA-TAACGTTAAGGCCAAGATTCAG-GACAAGGAAGGGATTCCGCCGGACC 153456
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | || || ||||| || ||||| || || | ||| || | | ||||||||
Sbjct 153455 AGCAGAGGCTCATCTTCGCCGGGAAGCAATTGGAGGAAGGTCGTACCCTCGCCGATTACA 153396
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
|||| || ||||| || ||||| || | ||| | |||||
Sbjct 153395 ATATCCAGAAAGAGTCTACGCTCCACCTTGTGTTGAGGCT 153356
>seq6693
Length=64523
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054
||| ||||| || || || || || | || || || |||| || | || || |||||
Sbjct 42143 AACCATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAGTC 42084
Query 25055 GTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112
|| ||||| ||||| || || ||| || ||| ||||| || ||||| |||||
Sbjct 42083 CTCAGACACCATCGA--CAATGTCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCACCG 42026
Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172
||||||||||| | ||||| || || ||||| | ||||||| || || | | |||
Sbjct 42025 GACCAACAGCGTTTGATTTTCGCAGGGAAACAGCTCGAAGATGGCCGAACCTTAGCCGAC 41966
Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || || || || ||||| || || | |||||
Sbjct 41965 TACAACATCCAGAAGGAGTCCACTCTTCACCTTGTGCT 41928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433115928735140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |